RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 MITD1Q8WV92 249 aa8.63□□□□□ -1.03
VPS25-202ENST00000589219 NANOS1Q8WY41 292 aaKnown RBP8.63□□□□□ -1.03
VPS25-202ENST00000589219 MRPS24Q96EL2 167 aaKnown RBP8.63□□□□□ -1.03
VPS25-202ENST00000589219 ELL3Q9HB65 397 aaPredicted RBP8.63□□□□□ -1.03
VPS25-202ENST00000589219 TMEM165Q9HC07 324 aa8.63□□□□□ -1.03
VPS25-202ENST00000589219 SLC7A10Q9NS82 523 aa8.63□□□□□ -1.03
VPS25-202ENST00000589219 HSF4Q9ULV5 492 aa8.63□□□□□ -1.03
VPS25-202ENST00000589219 EDARQ9UNE0 448 aa8.63□□□□□ -1.03
VPS25-202ENST00000589219 MAB21L2Q9Y586 359 aa8.63□□□□□ -1.03
VPS25-202ENST00000589219 LRRK2Q5S007 2527 aa8.63□□□□□ -1.03
VPS25-202ENST00000589219 RP1L1Q8IWN7 2480 aaPredicted RBP8.63□□□□□ -1.03
VPS25-202ENST00000589219 PRRC2CQ9Y520 2896 aaKnown RBP8.63□□□□□ -1.03
VPS25-202ENST00000589219 CACNA1CQ13936 2221 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 FXYD6-FXYD2A0A087WZ82 144 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 A0A0B4J2A0 478 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 C9orf170A2RU37 121 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 LINC00862A6NCI5 91 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 OR2AT4A6NND4 320 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 MCRIP1C9JLW8 97 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 NOS1APO75052 506 aaPredicted RBP8.62□□□□□ -1.03
VPS25-202ENST00000589219 RP2O75695 350 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 CEACAM4O75871 244 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 DUS4LO95620 317 aaKnown RBP8.62□□□□□ -1.03
VPS25-202ENST00000589219 SERPINA5P05154 406 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 EDN3P14138 238 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 PPP3CBP16298 524 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 CXCL2P19875 107 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 DTYMKP23919 212 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 SSTR2P30874 369 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 S100A11P31949 105 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 SNU13P55769 128 aaKnown RBP8.62□□□□□ -1.03
VPS25-202ENST00000589219 PPP1R1AQ13522 171 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 EXOSC2Q13868 293 aaKnown RBP8.62□□□□□ -1.03
VPS25-202ENST00000589219 C2orf68Q2NKX9 166 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 ZNF766Q5HY98 468 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 CLLU1Q5K131 121 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 LY6G6FQ5SQ64 297 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 DCAF12L2Q5VW00 463 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 PLCXD3Q63HM9 321 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 C1QL2Q7Z5L3 287 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 PEG10Q86TG7 708 aaKnown RBP8.62□□□□□ -1.03
VPS25-202ENST00000589219 LHFPL1Q86WI0 220 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 TUSC5Q8IXB3 177 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 ZSCAN4Q8NAM6 433 aaPredicted RBP8.62□□□□□ -1.03
VPS25-202ENST00000589219 CSNK2A3Q8NEV1 391 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 TMEM185AQ8NFB2 350 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 OR10K1Q8NGX5 313 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 TERB2Q8NHR7 220 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 FGFBP3Q8TAT2 258 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 FNDC9Q8TBE3 224 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 EMG1Q92979 244 aaKnown RBP8.62□□□□□ -1.03
VPS25-202ENST00000589219 MRGPRFQ96AM1 343 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 DPCDQ9BVM2 203 aaPredicted RBP8.62□□□□□ -1.03
VPS25-202ENST00000589219 FXYD6Q9H0Q3 95 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 PPA2Q9H2U2 334 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 ZDHHC11Q9H8X9 412 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 CALHM2Q9HA72 323 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 COMMD9Q9P000 198 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 SHPKQ9UHJ6 478 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 NCKAP5O14513 1909 aa8.62□□□□□ -1.03
VPS25-202ENST00000589219 TRGV5A0A0B4J1U4 118 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 FAM230AA0A1W2PPH8 454 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 FAM90A10PA6NDY2 464 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 FAM90A18PA6NE21 464 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 FAM90A16PA6NEW6 464 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 FAM90A20PA6NIJ5 464 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 FAM90A8PA6NJQ4 464 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 FAM90A7PA6NKC0 464 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 FIGNL2A6NMB9 653 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 CYSRT1A8MQ03 144 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 FAM90A22PA8MWA6 464 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 FAM90A12PA8MX19 464 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 FAM90A5PA8MXJ8 464 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 FAM90A23PA8MXZ1 464 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 ARPC5O15511 151 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 B3GALNT1O75752 331 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 AGFG2O95081 481 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 HTR3BO95264 441 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 SIX6O95475 246 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 MPC2O95563 127 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 FAM90A15PP0C7V4 464 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 FAM90A13PP0C7W8 464 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 FAM90A14PP0C7W9 464 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 FAM90A24PP0C7X0 464 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 PATE4P0C8F1 98 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 SLC25A4P12235 298 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 PMELP40967 661 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 OR3A3P47888 321 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 OR3A2P47893 321 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 RAB14P61106 215 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 IL13RA1P78552 427 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 ZNF92Q03936 586 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 MALLQ13021 153 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 ZNF345Q14585 488 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 ESPL1Q14674 2120 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 CHRFAM7AQ494W8 412 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 TMEM128Q5BJH2 165 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 TMEM65Q6PI78 240 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 C17orf107Q6ZR85 190 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 RTN4RL2Q86UN3 420 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms