RNA–Protein interactions for RNA: ENST00000589158.1

CLPTM1-210, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-210ENST00000589158 NRIP2Q9BQI9 281 aa11.66□□□□□ -0.54
CLPTM1-210ENST00000589158 JAM3Q9BX67 310 aa11.66□□□□□ -0.54
CLPTM1-210ENST00000589158 COMMD4Q9H0A8 199 aa11.66□□□□□ -0.54
CLPTM1-210ENST00000589158 CHCHD3Q9NX63 227 aaKnown RBP11.66□□□□□ -0.54
CLPTM1-210ENST00000589158 ONECUT1Q9UBC0 465 aa11.66□□□□□ -0.54
CLPTM1-210ENST00000589158 HSPE1-MOB4S4R3N1 261 aa11.66□□□□□ -0.54
CLPTM1-210ENST00000589158 IGKV1-27A0A075B6S5 117 aa11.65□□□□□ -0.54
CLPTM1-210ENST00000589158 TRBV2A0A0J9YWF9 115 aa11.65□□□□□ -0.54
CLPTM1-210ENST00000589158 RFPL4AA6NLU0 287 aa11.65□□□□□ -0.54
CLPTM1-210ENST00000589158 TMEM212A6NML5 194 aa11.65□□□□□ -0.54
CLPTM1-210ENST00000589158 RFPL4AL1F8VTS6 287 aa11.65□□□□□ -0.54
CLPTM1-210ENST00000589158 ZFPL1O95159 310 aa11.65□□□□□ -0.54
CLPTM1-210ENST00000589158 RPSAP08865 295 aaKnown RBP11.65□□□□□ -0.54
CLPTM1-210ENST00000589158 PRKACBP22694 351 aa11.65□□□□□ -0.54
CLPTM1-210ENST00000589158 AZGP1P25311 298 aaKnown RBP11.65□□□□□ -0.54
CLPTM1-210ENST00000589158 PRDX2P32119 198 aa11.65□□□□□ -0.54
CLPTM1-210ENST00000589158 RBP2P50120 134 aa11.65□□□□□ -0.54
CLPTM1-210ENST00000589158 GTF2A1P52655 376 aaPredicted RBP11.65□□□□□ -0.54
CLPTM1-210ENST00000589158 MTCP1P56278 107 aa11.65□□□□□ -0.54
CLPTM1-210ENST00000589158 MED21Q13503 144 aa11.65□□□□□ -0.54
CLPTM1-210ENST00000589158 OR2G6Q5TZ20 316 aa11.65□□□□□ -0.54
CLPTM1-210ENST00000589158 GPR157Q5UAW9 335 aa11.65□□□□□ -0.54
CLPTM1-210ENST00000589158 SLC25A26Q70HW3 274 aa11.65□□□□□ -0.54
CLPTM1-210ENST00000589158 UTS2BQ765I0 119 aa11.65□□□□□ -0.54
CLPTM1-210ENST00000589158 CD177Q8N6Q3 437 aa11.65□□□□□ -0.54
CLPTM1-210ENST00000589158 DNAAF1Q8NEP3 725 aa11.65□□□□□ -0.54
CLPTM1-210ENST00000589158 OR13C9Q8NGT0 318 aa11.65□□□□□ -0.54
CLPTM1-210ENST00000589158 HAVCR2Q8TDQ0 301 aa11.65□□□□□ -0.54
CLPTM1-210ENST00000589158 TSEN15Q8WW01 171 aaKnown RBP11.65□□□□□ -0.54
CLPTM1-210ENST00000589158 SLAMF9Q96A28 289 aa11.65□□□□□ -0.54
CLPTM1-210ENST00000589158 TMEM80Q96HE8 168 aa11.65□□□□□ -0.54
CLPTM1-210ENST00000589158 TBX15Q96SF7 602 aa11.65□□□□□ -0.54
CLPTM1-210ENST00000589158 PDCD1LG2Q9BQ51 273 aa11.65□□□□□ -0.54
CLPTM1-210ENST00000589158 DCTN5Q9BTE1 182 aa11.65□□□□□ -0.54
CLPTM1-210ENST00000589158 OR14J1Q9UGF5 321 aa11.65□□□□□ -0.54
CLPTM1-210ENST00000589158 ZNF222Q9UK12 451 aa11.65□□□□□ -0.54
CLPTM1-210ENST00000589158 DIMT1Q9UNQ2 313 aaKnown RBP11.65□□□□□ -0.54
CLPTM1-210ENST00000589158 CAB39Q9Y376 341 aaPredicted RBP11.65□□□□□ -0.54
CLPTM1-210ENST00000589158 EXOSC1Q9Y3B2 195 aaKnown RBP11.65□□□□□ -0.54
CLPTM1-210ENST00000589158 MAB21L2Q9Y586 359 aa11.65□□□□□ -0.54
CLPTM1-210ENST00000589158 IGKV1-9A0A0C4DH69 117 aa11.64□□□□□ -0.55
CLPTM1-210ENST00000589158 A0A1W2PQ09 198 aa11.64□□□□□ -0.55
CLPTM1-210ENST00000589158 TRIM77I1YAP6 450 aa11.64□□□□□ -0.55
CLPTM1-210ENST00000589158 SLC1A7O00341 560 aa11.64□□□□□ -0.55
CLPTM1-210ENST00000589158 CYB5AP00167 134 aa11.64□□□□□ -0.55
CLPTM1-210ENST00000589158 MMP9P14780 707 aa11.64□□□□□ -0.55
CLPTM1-210ENST00000589158 POU3F4P49335 361 aa11.64□□□□□ -0.55
CLPTM1-210ENST00000589158 CEBPDP49716 269 aaPredicted RBP11.64□□□□□ -0.55
CLPTM1-210ENST00000589158 BRD3OSQ6XYD6 125 aa11.64□□□□□ -0.55
CLPTM1-210ENST00000589158 CMTM4Q8IZR5 234 aa11.64□□□□□ -0.55
CLPTM1-210ENST00000589158 LY6G5BQ8NDX9 201 aa11.64□□□□□ -0.55
CLPTM1-210ENST00000589158 GGHQ92820 318 aa11.64□□□□□ -0.55
CLPTM1-210ENST00000589158 SDSLQ96GA7 329 aa11.64□□□□□ -0.55
CLPTM1-210ENST00000589158 CEP19Q96LK0 163 aa11.64□□□□□ -0.55
CLPTM1-210ENST00000589158 SIRPDQ9H106 197 aa11.64□□□□□ -0.55
CLPTM1-210ENST00000589158 ELL3Q9HB65 397 aaPredicted RBP11.64□□□□□ -0.55
CLPTM1-210ENST00000589158 MTCH1Q9NZJ7 389 aa11.64□□□□□ -0.55
CLPTM1-210ENST00000589158 CLEC2DQ9UHP7 191 aa11.64□□□□□ -0.55
CLPTM1-210ENST00000589158 DHDHQ9UQ10 334 aa11.64□□□□□ -0.55
CLPTM1-210ENST00000589158 SOX21Q9Y651 276 aaPredicted RBP11.64□□□□□ -0.55
CLPTM1-210ENST00000589158 ARHGAP32A7KAX9 2087 aa11.64□□□□□ -0.55
CLPTM1-210ENST00000589158 COL6A5A8TX70 2615 aa11.63□□□□□ -0.55
CLPTM1-210ENST00000589158 EFCAB10A6NFE3 127 aa11.63□□□□□ -0.55
CLPTM1-210ENST00000589158 XPNPEP2O43895 674 aa11.63□□□□□ -0.55
CLPTM1-210ENST00000589158 CAV3P56539 151 aa11.63□□□□□ -0.55
CLPTM1-210ENST00000589158 ERVK11-1P61568 191 aa11.63□□□□□ -0.55
CLPTM1-210ENST00000589158 ST3GAL4Q11206 333 aa11.63□□□□□ -0.55
CLPTM1-210ENST00000589158 PDCD1Q15116 288 aa11.63□□□□□ -0.55
CLPTM1-210ENST00000589158 RPL22L1Q6P5R6 122 aaKnown RBP11.63□□□□□ -0.55
CLPTM1-210ENST00000589158 LHFPL2Q6ZUX7 228 aa11.63□□□□□ -0.55
CLPTM1-210ENST00000589158 PDZD9Q8IXQ8 264 aa11.63□□□□□ -0.55
CLPTM1-210ENST00000589158 MKXQ8IYA7 352 aa11.63□□□□□ -0.55
CLPTM1-210ENST00000589158 ZNF561Q8N587 486 aa11.63□□□□□ -0.55
CLPTM1-210ENST00000589158 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.63□□□□□ -0.55
CLPTM1-210ENST00000589158 BPIFB6Q8NFQ5 453 aa11.63□□□□□ -0.55
CLPTM1-210ENST00000589158 OR5D14Q8NGL3 314 aa11.63□□□□□ -0.55
CLPTM1-210ENST00000589158 NRG4Q8WWG1 115 aa11.63□□□□□ -0.55
CLPTM1-210ENST00000589158 GATAD2BQ8WXI9 593 aa11.63□□□□□ -0.55
CLPTM1-210ENST00000589158 TFAP2CQ92754 450 aa11.63□□□□□ -0.55
CLPTM1-210ENST00000589158 LHX4Q969G2 390 aa11.63□□□□□ -0.55
CLPTM1-210ENST00000589158 RFT1Q96AA3 541 aa11.63□□□□□ -0.55
CLPTM1-210ENST00000589158 SPSB1Q96BD6 273 aa11.63□□□□□ -0.55
CLPTM1-210ENST00000589158 OPALINQ96PE5 141 aa11.63□□□□□ -0.55
CLPTM1-210ENST00000589158 ZCCHC4Q9H5U6 513 aa11.63□□□□□ -0.55
CLPTM1-210ENST00000589158 NEK6Q9HC98 313 aa11.63□□□□□ -0.55
CLPTM1-210ENST00000589158 HES4Q9HCC6 221 aa11.63□□□□□ -0.55
CLPTM1-210ENST00000589158 BABAM2Q9NXR7 383 aa11.63□□□□□ -0.55
CLPTM1-210ENST00000589158 KPTNQ9Y664 436 aa11.63□□□□□ -0.55
CLPTM1-210ENST00000589158 CENPVL3A0A0U1RRI6 287 aa11.62□□□□□ -0.55
CLPTM1-210ENST00000589158 F8VVB4 439 aa11.62□□□□□ -0.55
CLPTM1-210ENST00000589158 F8VWA3 439 aa11.62□□□□□ -0.55
CLPTM1-210ENST00000589158 H0YHG0 523 aa11.62□□□□□ -0.55
CLPTM1-210ENST00000589158 KNG1P01042 644 aa11.62□□□□□ -0.55
CLPTM1-210ENST00000589158 SOX2P48431 317 aa11.62□□□□□ -0.55
CLPTM1-210ENST00000589158 BAMBIQ13145 260 aa11.62□□□□□ -0.55
CLPTM1-210ENST00000589158 CDK5R1Q15078 307 aa11.62□□□□□ -0.55
CLPTM1-210ENST00000589158 CCDC58Q4VC31 144 aa11.62□□□□□ -0.55
CLPTM1-210ENST00000589158 RUSC1-AS1Q66K80 236 aa11.62□□□□□ -0.55
CLPTM1-210ENST00000589158 XAF1Q6GPH4 301 aa11.62□□□□□ -0.55
CLPTM1-210ENST00000589158 C9orf139Q6ZV77 190 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms