RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 SFT2D2O95562 160 aa13.2□□□□□ -0.3
MBD1-217ENST00000588937 CFDP00746 253 aaPredicted RBP13.2□□□□□ -0.3
MBD1-217ENST00000588937 NOVA1P51513 510 aaKnown RBP13.2□□□□□ -0.3
MBD1-217ENST00000588937 CYCSP99999 105 aaKnown RBP13.2□□□□□ -0.3
MBD1-217ENST00000588937 AADACL3Q5VUY0 350 aa13.2□□□□□ -0.3
MBD1-217ENST00000588937 C11orf87Q6NUJ2 197 aa13.2□□□□□ -0.3
MBD1-217ENST00000588937 GSG1LQ6UXU4 331 aa13.2□□□□□ -0.3
MBD1-217ENST00000588937 KCTD9Q7L273 389 aa13.2□□□□□ -0.3
MBD1-217ENST00000588937 OR51F2Q8NH61 342 aa13.2□□□□□ -0.3
MBD1-217ENST00000588937 CMSS1Q9BQ75 279 aaKnown RBP13.2□□□□□ -0.3
MBD1-217ENST00000588937 SPRR3Q9UBC9 169 aa13.2□□□□□ -0.3
MBD1-217ENST00000588937 AUP1Q9Y679 476 aa13.2□□□□□ -0.3
MBD1-217ENST00000588937 MYO7BQ6PIF6 2116 aa13.2□□□□□ -0.3
MBD1-217ENST00000588937 MED13Q9UHV7 2174 aa13.2□□□□□ -0.3
MBD1-217ENST00000588937 FAM25EA8MYX2 175 aa13.2□□□□□ -0.3
MBD1-217ENST00000588937 CHATP28329 748 aa13.2□□□□□ -0.3
MBD1-217ENST00000588937 APLNRP35414 380 aa13.2□□□□□ -0.3
MBD1-217ENST00000588937 PMELP40967 661 aa13.2□□□□□ -0.3
MBD1-217ENST00000588937 FOXG1P55316 489 aaPredicted RBP13.2□□□□□ -0.3
MBD1-217ENST00000588937 PRSS12P56730 875 aa13.2□□□□□ -0.3
MBD1-217ENST00000588937 FBXW9Q5XUX1 488 aa13.2□□□□□ -0.3
MBD1-217ENST00000588937 SIGIRRQ6IA17 410 aa13.2□□□□□ -0.3
MBD1-217ENST00000588937 OR56B2PQ8NGI1 322 aa13.2□□□□□ -0.3
MBD1-217ENST00000588937 OR6K3Q8NGY3 331 aa13.2□□□□□ -0.3
MBD1-217ENST00000588937 POM121L2Q96KW2 1035 aa13.2□□□□□ -0.3
MBD1-217ENST00000588937 FAAP24Q9BTP7 215 aa13.2□□□□□ -0.3
MBD1-217ENST00000588937 PAPOLGQ9BWT3 736 aaKnown RBP13.2□□□□□ -0.3
MBD1-217ENST00000588937 GLRX2Q9NS18 164 aa13.2□□□□□ -0.3
MBD1-217ENST00000588937 DLL3Q9NYJ7 618 aa13.2□□□□□ -0.3
MBD1-217ENST00000588937 KIF25Q9UIL4 384 aa13.2□□□□□ -0.3
MBD1-217ENST00000588937 ANXA10Q9UJ72 324 aa13.2□□□□□ -0.3
MBD1-217ENST00000588937 C14orf166Q9Y224 244 aaKnown RBP13.2□□□□□ -0.3
MBD1-217ENST00000588937 ST3GAL6Q9Y274 331 aa13.2□□□□□ -0.3
MBD1-217ENST00000588937 RPS10-NUDT3A0A1W2PQS6 291 aa13.19□□□□□ -0.3
MBD1-217ENST00000588937 LEUTXA8MZ59 168 aa13.19□□□□□ -0.3
MBD1-217ENST00000588937 PRSS44E7EML9 344 aa13.19□□□□□ -0.3
MBD1-217ENST00000588937 SDCBPO00560 298 aaPredicted RBP13.19□□□□□ -0.3
MBD1-217ENST00000588937 CCSO14618 274 aa13.19□□□□□ -0.3
MBD1-217ENST00000588937 B3GALNT1O75752 331 aa13.19□□□□□ -0.3
MBD1-217ENST00000588937 OR2F2O95006 317 aa13.19□□□□□ -0.3
MBD1-217ENST00000588937 CST4P01036 141 aa13.19□□□□□ -0.3
MBD1-217ENST00000588937 OR2F1Q13607 317 aa13.19□□□□□ -0.3
MBD1-217ENST00000588937 ZNF345Q14585 488 aa13.19□□□□□ -0.3
MBD1-217ENST00000588937 RTP5Q14D33 572 aa13.19□□□□□ -0.3
MBD1-217ENST00000588937 NHLRC3Q5JS37 347 aa13.19□□□□□ -0.3
MBD1-217ENST00000588937 P4HA3Q7Z4N8 544 aa13.19□□□□□ -0.3
MBD1-217ENST00000588937 CNTRLQ7Z7A1 2325 aa13.19□□□□□ -0.3
MBD1-217ENST00000588937 SLC51BQ86UW2 128 aa13.19□□□□□ -0.3
MBD1-217ENST00000588937 VASH2Q86V25 355 aa13.19□□□□□ -0.3
MBD1-217ENST00000588937 SAXO1Q8IYX7 474 aa13.19□□□□□ -0.3
MBD1-217ENST00000588937 FBXL14Q8N1E6 418 aa13.19□□□□□ -0.3
MBD1-217ENST00000588937 OR1K1Q8NGR3 316 aa13.19□□□□□ -0.3
MBD1-217ENST00000588937 MAFIPQ8WZ33 124 aa13.19□□□□□ -0.3
MBD1-217ENST00000588937 RTBDNQ9BSG5 229 aaPredicted RBP13.19□□□□□ -0.3
MBD1-217ENST00000588937 NMES1Q9C002 83 aa13.19□□□□□ -0.3
MBD1-217ENST00000588937 PRSS50Q9UI38 385 aa13.19□□□□□ -0.3
MBD1-217ENST00000588937 AK3Q9UIJ7 227 aa13.19□□□□□ -0.3
MBD1-217ENST00000588937 IGKV1-12A0A0C4DH73 117 aa13.18□□□□□ -0.3
MBD1-217ENST00000588937 C5orf51A6NDU8 294 aa13.18□□□□□ -0.3
MBD1-217ENST00000588937 FAM90A10PA6NDY2 464 aa13.18□□□□□ -0.3
MBD1-217ENST00000588937 FAM90A18PA6NE21 464 aa13.18□□□□□ -0.3
MBD1-217ENST00000588937 FAM90A16PA6NEW6 464 aa13.18□□□□□ -0.3
MBD1-217ENST00000588937 FAM90A20PA6NIJ5 464 aa13.18□□□□□ -0.3
MBD1-217ENST00000588937 FAM90A8PA6NJQ4 464 aa13.18□□□□□ -0.3
MBD1-217ENST00000588937 FAM90A7PA6NKC0 464 aa13.18□□□□□ -0.3
MBD1-217ENST00000588937 FAM90A22PA8MWA6 464 aa13.18□□□□□ -0.3
MBD1-217ENST00000588937 FAM90A12PA8MX19 464 aa13.18□□□□□ -0.3
MBD1-217ENST00000588937 FAM90A5PA8MXJ8 464 aa13.18□□□□□ -0.3
MBD1-217ENST00000588937 FAM90A23PA8MXZ1 464 aa13.18□□□□□ -0.3
MBD1-217ENST00000588937 NKX2-8O15522 239 aa13.18□□□□□ -0.3
MBD1-217ENST00000588937 SS18L1O75177 396 aaPredicted RBP13.18□□□□□ -0.3
MBD1-217ENST00000588937 IGKV1D-12P01611 117 aa13.18□□□□□ -0.3
MBD1-217ENST00000588937 FAM90A15PP0C7V4 464 aa13.18□□□□□ -0.3
MBD1-217ENST00000588937 FAM90A13PP0C7W8 464 aa13.18□□□□□ -0.3
MBD1-217ENST00000588937 FAM90A14PP0C7W9 464 aa13.18□□□□□ -0.3
MBD1-217ENST00000588937 FAM90A24PP0C7X0 464 aa13.18□□□□□ -0.3
MBD1-217ENST00000588937 CCL11P51671 97 aa13.18□□□□□ -0.3
MBD1-217ENST00000588937 PRDX4Q13162 271 aa13.18□□□□□ -0.3
MBD1-217ENST00000588937 CLN3Q13286 438 aa13.18□□□□□ -0.3
MBD1-217ENST00000588937 PLEKHN1Q494U1 663 aaPredicted RBP13.18□□□□□ -0.3
MBD1-217ENST00000588937 RNFT1Q5M7Z0 435 aa13.18□□□□□ -0.3
MBD1-217ENST00000588937 ZDHHC23Q8IYP9 409 aa13.18□□□□□ -0.3
MBD1-217ENST00000588937 ZNF611Q8N823 705 aa13.18□□□□□ -0.3
MBD1-217ENST00000588937 OR5L1Q8NGL2 311 aa13.18□□□□□ -0.3
MBD1-217ENST00000588937 THAP6Q8TBB0 222 aa13.18□□□□□ -0.3
MBD1-217ENST00000588937 SCARB1Q8WTV0 552 aa13.18□□□□□ -0.3
MBD1-217ENST00000588937 PPP1R1CQ8WVI7 109 aa13.18□□□□□ -0.3
MBD1-217ENST00000588937 TMEM230Q96A57 120 aa13.18□□□□□ -0.3
MBD1-217ENST00000588937 GMPPAQ96IJ6 420 aaPredicted RBP13.18□□□□□ -0.3
MBD1-217ENST00000588937 SEC22AQ96IW7 307 aa13.18□□□□□ -0.3
MBD1-217ENST00000588937 DHRS9Q9BPW9 319 aa13.18□□□□□ -0.3
MBD1-217ENST00000588937 C12orf49Q9H741 205 aa13.18□□□□□ -0.3
MBD1-217ENST00000588937 RAB18Q9NP72 206 aa13.18□□□□□ -0.3
MBD1-217ENST00000588937 NECAP2Q9NVZ3 263 aa13.18□□□□□ -0.3
MBD1-217ENST00000588937 ARHGAP21Q5T5U3 1957 aa13.17□□□□□ -0.3
MBD1-217ENST00000588937 PQLC2LA1A4F0 135 aa13.17□□□□□ -0.3
MBD1-217ENST00000588937 GEMIN2O14893 280 aaKnown RBP13.17□□□□□ -0.3
MBD1-217ENST00000588937 TPD52L2O43399 206 aaKnown RBP13.17□□□□□ -0.3
MBD1-217ENST00000588937 PDCD6O75340 191 aa13.17□□□□□ -0.3
MBD1-217ENST00000588937 PGAM2P15259 253 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms