RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 SRSF1Q07955 248 aaKnown RBP eCLIP12.72□□□□□ -0.37
CCDC43-203ENST00000588210 C1orf185Q5T7R7 199 aa12.72□□□□□ -0.37
CCDC43-203ENST00000588210 ELP2Q6IA86 826 aa12.72□□□□□ -0.37
CCDC43-203ENST00000588210 ATRAIDQ6UW56 229 aa12.72□□□□□ -0.37
CCDC43-203ENST00000588210 TMEM104Q8NE00 496 aa12.72□□□□□ -0.37
CCDC43-203ENST00000588210 TERB2Q8NHR7 220 aa12.72□□□□□ -0.37
CCDC43-203ENST00000588210 AIFM2Q9BRQ8 373 aa12.72□□□□□ -0.37
CCDC43-203ENST00000588210 CHMP1AQ9HD42 196 aaPredicted RBP12.72□□□□□ -0.37
CCDC43-203ENST00000588210 GPR84Q9NQS5 396 aa12.72□□□□□ -0.37
CCDC43-203ENST00000588210 ZC4H2Q9NQZ6 224 aa12.72□□□□□ -0.37
CCDC43-203ENST00000588210 A0A0B4J2A0 478 aa12.71□□□□□ -0.37
CCDC43-203ENST00000588210 MPTX1A8MV57 137 aa12.71□□□□□ -0.37
CCDC43-203ENST00000588210 EEF1E1-BLOC1S5C9J1V9 151 aa12.71□□□□□ -0.37
CCDC43-203ENST00000588210 MFNGO00587 321 aa12.71□□□□□ -0.37
CCDC43-203ENST00000588210 SERPINF1P36955 418 aa12.71□□□□□ -0.37
CCDC43-203ENST00000588210 SRYQ05066 204 aa12.71□□□□□ -0.37
CCDC43-203ENST00000588210 HIST3H3Q16695 136 aa12.71□□□□□ -0.37
CCDC43-203ENST00000588210 TMEM128Q5BJH2 165 aa12.71□□□□□ -0.37
CCDC43-203ENST00000588210 RTL6Q6ICC9 239 aa12.71□□□□□ -0.37
CCDC43-203ENST00000588210 DOK3Q7L591 496 aa12.71□□□□□ -0.37
CCDC43-203ENST00000588210 COMMD2Q86X83 199 aa12.71□□□□□ -0.37
CCDC43-203ENST00000588210 TMEM185AQ8NFB2 350 aa12.71□□□□□ -0.37
CCDC43-203ENST00000588210 BPIFCQ8NFQ6 507 aa12.71□□□□□ -0.37
CCDC43-203ENST00000588210 SSC4DQ8WTU2 575 aa12.71□□□□□ -0.37
CCDC43-203ENST00000588210 SPACA5Q96QH8 159 aa12.71□□□□□ -0.37
CCDC43-203ENST00000588210 SOX7Q9BT81 388 aa12.71□□□□□ -0.37
CCDC43-203ENST00000588210 TMEM59Q9BXS4 323 aa12.71□□□□□ -0.37
CCDC43-203ENST00000588210 ASH2LQ9UBL3 628 aa12.71□□□□□ -0.37
CCDC43-203ENST00000588210 SHPKQ9UHJ6 478 aa12.71□□□□□ -0.37
CCDC43-203ENST00000588210 FAM215AQ9Y5M1 114 aa12.71□□□□□ -0.37
CCDC43-203ENST00000588210 MED12Q93074 2177 aa12.71□□□□□ -0.37
CCDC43-203ENST00000588210 HIVEP3Q5T1R4 2406 aa12.71□□□□□ -0.37
CCDC43-203ENST00000588210 TEX13DA0A0J9YY54 714 aaPredicted RBP12.71□□□□□ -0.38
CCDC43-203ENST00000588210 RAB19A4D1S5 217 aa12.71□□□□□ -0.38
CCDC43-203ENST00000588210 DNASE2O00115 360 aaPredicted RBP12.71□□□□□ -0.38
CCDC43-203ENST00000588210 SOCS1O15524 211 aa12.71□□□□□ -0.38
CCDC43-203ENST00000588210 CDAP32320 146 aa12.71□□□□□ -0.38
CCDC43-203ENST00000588210 SUCLG1P53597 346 aaKnown RBP12.71□□□□□ -0.38
CCDC43-203ENST00000588210 CYCSP99999 105 aaKnown RBP12.71□□□□□ -0.38
CCDC43-203ENST00000588210 OR56B1Q8NGI3 324 aa12.71□□□□□ -0.38
CCDC43-203ENST00000588210 TMEM230Q96A57 120 aa12.71□□□□□ -0.38
CCDC43-203ENST00000588210 PIK3IP1Q96FE7 263 aa12.71□□□□□ -0.38
CCDC43-203ENST00000588210 LRRC46Q96FV0 321 aa12.71□□□□□ -0.38
CCDC43-203ENST00000588210 OXGR1Q96P68 337 aa12.71□□□□□ -0.38
CCDC43-203ENST00000588210 OCSTAMPQ9BR26 566 aa12.71□□□□□ -0.38
CCDC43-203ENST00000588210 CALHM2Q9HA72 323 aa12.71□□□□□ -0.38
CCDC43-203ENST00000588210 ZNF319Q9P2F9 582 aa12.71□□□□□ -0.38
CCDC43-203ENST00000588210 GPR132Q9UNW8 380 aa12.71□□□□□ -0.38
CCDC43-203ENST00000588210 C5orf51A6NDU8 294 aa12.7□□□□□ -0.38
CCDC43-203ENST00000588210 GJE1A6NN92 205 aa12.7□□□□□ -0.38
CCDC43-203ENST00000588210 FGF16O43320 207 aa12.7□□□□□ -0.38
CCDC43-203ENST00000588210 HCKP08631 526 aa12.7□□□□□ -0.38
CCDC43-203ENST00000588210 SLC2A1P11166 492 aa12.7□□□□□ -0.38
CCDC43-203ENST00000588210 FPR2P25090 351 aa12.7□□□□□ -0.38
CCDC43-203ENST00000588210 CBX5P45973 191 aa12.7□□□□□ -0.38
CCDC43-203ENST00000588210 GRB2P62993 217 aaKnown RBP12.7□□□□□ -0.38
CCDC43-203ENST00000588210 ACSF3Q4G176 576 aaPredicted RBP12.7□□□□□ -0.38
CCDC43-203ENST00000588210 NSUN5P2Q63ZY6 315 aa12.7□□□□□ -0.38
CCDC43-203ENST00000588210 PEG10Q86TG7 708 aaKnown RBP12.7□□□□□ -0.38
CCDC43-203ENST00000588210 OR5AP2Q8NGF4 316 aa12.7□□□□□ -0.38
CCDC43-203ENST00000588210 SLC25A43Q8WUT9 341 aaPredicted RBP12.7□□□□□ -0.38
CCDC43-203ENST00000588210 UCN2Q96RP3 112 aa12.7□□□□□ -0.38
CCDC43-203ENST00000588210 C5orf66Q9H5L9 145 aa12.7□□□□□ -0.38
CCDC43-203ENST00000588210 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.7□□□□□ -0.38
CCDC43-203ENST00000588210 FASNP49327 2511 aaKnown RBP12.7□□□□□ -0.38
CCDC43-203ENST00000588210 HELZ2Q9BYK8 2649 aaKnown RBP12.7□□□□□ -0.38
CCDC43-203ENST00000588210 LOC102725191A0A1B0GVB3 256 aa12.69□□□□□ -0.38
CCDC43-203ENST00000588210 A0A1W2PNR3 127 aa12.69□□□□□ -0.38
CCDC43-203ENST00000588210 ZNF814B7Z6K7 855 aa12.69□□□□□ -0.38
CCDC43-203ENST00000588210 ATP6V1G2-DDX39BF2Z307 99 aa12.69□□□□□ -0.38
CCDC43-203ENST00000588210 RAD51DO75771 328 aa12.69□□□□□ -0.38
CCDC43-203ENST00000588210 SFT2D2O95562 160 aa12.69□□□□□ -0.38
CCDC43-203ENST00000588210 TPT1P13693 172 aaKnown RBP12.69□□□□□ -0.38
CCDC43-203ENST00000588210 FKBP2P26885 142 aaKnown RBP12.69□□□□□ -0.38
CCDC43-203ENST00000588210 TMEM50BP56557 158 aa12.69□□□□□ -0.38
CCDC43-203ENST00000588210 CLDN15P56746 228 aa12.69□□□□□ -0.38
CCDC43-203ENST00000588210 NAAAQ02083 359 aa12.69□□□□□ -0.38
CCDC43-203ENST00000588210 GGNQ86UU5 652 aa12.69□□□□□ -0.38
CCDC43-203ENST00000588210 RPRMLQ8N4K4 120 aa12.69□□□□□ -0.38
CCDC43-203ENST00000588210 SLC30A7Q8NEW0 376 aa12.69□□□□□ -0.38
CCDC43-203ENST00000588210 DCUN1D4Q92564 292 aa12.69□□□□□ -0.38
CCDC43-203ENST00000588210 MARC2Q969Z3 335 aa12.69□□□□□ -0.38
CCDC43-203ENST00000588210 FAM71F1Q96KD3 344 aaPredicted RBP12.69□□□□□ -0.38
CCDC43-203ENST00000588210 SCGB3A2Q96PL1 93 aa12.69□□□□□ -0.38
CCDC43-203ENST00000588210 OR5B2Q96R09 309 aa12.69□□□□□ -0.38
CCDC43-203ENST00000588210 TRIB1Q96RU8 372 aa12.69□□□□□ -0.38
CCDC43-203ENST00000588210 URM1Q9BTM9 101 aaKnown RBP12.69□□□□□ -0.38
CCDC43-203ENST00000588210 RAB18Q9NP72 206 aa12.69□□□□□ -0.38
CCDC43-203ENST00000588210 PCDHB10Q9UN67 800 aa12.69□□□□□ -0.38
CCDC43-203ENST00000588210 MYO18BQ8IUG5 2567 aa12.69□□□□□ -0.38
CCDC43-203ENST00000588210 MYO7BQ6PIF6 2116 aa12.69□□□□□ -0.38
CCDC43-203ENST00000588210 NCOA6Q14686 2063 aaPredicted RBP12.69□□□□□ -0.38
CCDC43-203ENST00000588210 RER1O15258 196 aa12.69□□□□□ -0.38
CCDC43-203ENST00000588210 NUPL2O15504 423 aaKnown RBP12.69□□□□□ -0.38
CCDC43-203ENST00000588210 IGLV3-1P01715 115 aa12.69□□□□□ -0.38
CCDC43-203ENST00000588210 LYL1P12980 280 aa12.69□□□□□ -0.38
CCDC43-203ENST00000588210 PGAM2P15259 253 aa12.69□□□□□ -0.38
CCDC43-203ENST00000588210 ANOS1P23352 680 aa12.69□□□□□ -0.38
CCDC43-203ENST00000588210 PDSS1Q5T2R2 415 aa12.69□□□□□ -0.38
CCDC43-203ENST00000588210 CARD17Q5XLA6 110 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms