RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 ACTR3P61158 418 aa11.67□□□□□ -0.54
VMP1-206ENST00000587945 ZNF273Q14593 569 aa11.67□□□□□ -0.54
VMP1-206ENST00000587945 CALHM1Q8IU99 346 aa11.67□□□□□ -0.54
VMP1-206ENST00000587945 ZNF561Q8N587 486 aa11.67□□□□□ -0.54
VMP1-206ENST00000587945 C11orf42Q8N5U0 333 aa11.67□□□□□ -0.54
VMP1-206ENST00000587945 YIPF7Q8N8F6 280 aa11.67□□□□□ -0.54
VMP1-206ENST00000587945 TRMT10AQ8TBZ6 339 aaKnown RBP11.67□□□□□ -0.54
VMP1-206ENST00000587945 MNTQ99583 582 aa11.67□□□□□ -0.54
VMP1-206ENST00000587945 FAM53CQ9NYF3 392 aa11.67□□□□□ -0.54
VMP1-206ENST00000587945 FAM230AA0A1W2PPH8 454 aa11.66□□□□□ -0.54
VMP1-206ENST00000587945 MEX3AA1L020 520 aaKnown RBP11.66□□□□□ -0.54
VMP1-206ENST00000587945 FASP25445 335 aa11.66□□□□□ -0.54
VMP1-206ENST00000587945 BNIP1Q12981 228 aa11.66□□□□□ -0.54
VMP1-206ENST00000587945 ZNF782Q6ZMW2 699 aaPredicted RBP11.66□□□□□ -0.54
VMP1-206ENST00000587945 Q6ZSR3 168 aa11.66□□□□□ -0.54
VMP1-206ENST00000587945 ZDHHC13Q8IUH4 622 aa11.66□□□□□ -0.54
VMP1-206ENST00000587945 GID4Q8IVV7 300 aa11.66□□□□□ -0.54
VMP1-206ENST00000587945 FAM110DQ8TAY7 271 aaPredicted RBP11.66□□□□□ -0.54
VMP1-206ENST00000587945 CIB1Q99828 191 aa11.66□□□□□ -0.54
VMP1-206ENST00000587945 GABARAPL1Q9H0R8 117 aa11.66□□□□□ -0.54
VMP1-206ENST00000587945 MEGF9Q9H1U4 602 aa11.66□□□□□ -0.54
VMP1-206ENST00000587945 HEXA-AS1Q9H8Q6 139 aa11.66□□□□□ -0.54
VMP1-206ENST00000587945 HES4Q9HCC6 221 aa11.66□□□□□ -0.54
VMP1-206ENST00000587945 POLDIP2Q9Y2S7 368 aa11.66□□□□□ -0.54
VMP1-206ENST00000587945 AP4S1Q9Y587 144 aa11.66□□□□□ -0.54
VMP1-206ENST00000587945 A0A1W2PQL4 384 aaPredicted RBP11.65□□□□□ -0.54
VMP1-206ENST00000587945 F8VVB4 439 aa11.65□□□□□ -0.54
VMP1-206ENST00000587945 F8VWA3 439 aa11.65□□□□□ -0.54
VMP1-206ENST00000587945 INMTO95050 263 aa11.65□□□□□ -0.54
VMP1-206ENST00000587945 TK1P04183 234 aa11.65□□□□□ -0.54
VMP1-206ENST00000587945 KRT8P05787 483 aa11.65□□□□□ -0.54
VMP1-206ENST00000587945 CCL1P22362 96 aa11.65□□□□□ -0.54
VMP1-206ENST00000587945 MPZP25189 248 aa11.65□□□□□ -0.54
VMP1-206ENST00000587945 GABRA5P31644 462 aa11.65□□□□□ -0.54
VMP1-206ENST00000587945 ERVK11-1P61568 191 aa11.65□□□□□ -0.54
VMP1-206ENST00000587945 UBE2V2Q15819 145 aa11.65□□□□□ -0.54
VMP1-206ENST00000587945 LRRC75BQ2VPJ9 315 aa11.65□□□□□ -0.54
VMP1-206ENST00000587945 CATSPERDQ86XM0 798 aa11.65□□□□□ -0.54
VMP1-206ENST00000587945 C1QL4Q86Z23 238 aa11.65□□□□□ -0.54
VMP1-206ENST00000587945 OR10H4Q8NGA5 316 aa11.65□□□□□ -0.54
VMP1-206ENST00000587945 FAM234AQ9H0X4 552 aa11.65□□□□□ -0.54
VMP1-206ENST00000587945 FBLN5Q9UBX5 448 aa11.65□□□□□ -0.54
VMP1-206ENST00000587945 VWFP04275 2813 aa11.65□□□□□ -0.54
VMP1-206ENST00000587945 PRKDCP78527 4128 aaKnown RBP11.65□□□□□ -0.55
VMP1-206ENST00000587945 IGKV1-27A0A075B6S5 117 aa11.64□□□□□ -0.55
VMP1-206ENST00000587945 A0A1W2PPH5 198 aa11.64□□□□□ -0.55
VMP1-206ENST00000587945 METTL15A6NJ78 407 aa11.64□□□□□ -0.55
VMP1-206ENST00000587945 SYT7O43581 403 aa11.64□□□□□ -0.55
VMP1-206ENST00000587945 HTR1FP30939 366 aa11.64□□□□□ -0.55
VMP1-206ENST00000587945 COL10A1Q03692 680 aa11.64□□□□□ -0.55
VMP1-206ENST00000587945 PLA1AQ53H76 456 aa11.64□□□□□ -0.55
VMP1-206ENST00000587945 C1orf146Q5VVC0 180 aa11.64□□□□□ -0.55
VMP1-206ENST00000587945 CRIP3Q6Q6R5 217 aa11.64□□□□□ -0.55
VMP1-206ENST00000587945 LHFPL4Q7Z7J7 247 aa11.64□□□□□ -0.55
VMP1-206ENST00000587945 PRSS35Q8N3Z0 413 aa11.64□□□□□ -0.55
VMP1-206ENST00000587945 C11orf44Q8N8P7 122 aa11.64□□□□□ -0.55
VMP1-206ENST00000587945 ASCC1Q8N9N2 400 aaKnown RBP11.64□□□□□ -0.55
VMP1-206ENST00000587945 PIFOQ8TCI5 191 aa11.64□□□□□ -0.55
VMP1-206ENST00000587945 SLAMF9Q96A28 289 aa11.64□□□□□ -0.55
VMP1-206ENST00000587945 RIBC2Q9H4K1 309 aa11.64□□□□□ -0.55
VMP1-206ENST00000587945 USE1Q9NZ43 259 aa11.64□□□□□ -0.55
VMP1-206ENST00000587945 MTCH1Q9NZJ7 389 aa11.64□□□□□ -0.55
VMP1-206ENST00000587945 WARS2Q9UGM6 360 aaKnown RBP11.64□□□□□ -0.55
VMP1-206ENST00000587945 FOXJ3Q9UPW0 622 aa11.64□□□□□ -0.55
VMP1-206ENST00000587945 SLC7A11Q9UPY5 501 aa11.64□□□□□ -0.55
VMP1-206ENST00000587945 MEGF11A6BM72 1044 aa11.63□□□□□ -0.55
VMP1-206ENST00000587945 DHRS7CA6NNS2 312 aa11.63□□□□□ -0.55
VMP1-206ENST00000587945 K7N7A8 449 aa11.63□□□□□ -0.55
VMP1-206ENST00000587945 CHST1O43916 411 aa11.63□□□□□ -0.55
VMP1-206ENST00000587945 OR2T7P0C7T2 308 aa11.63□□□□□ -0.55
VMP1-206ENST00000587945 DLX6P56179 175 aa11.63□□□□□ -0.55
VMP1-206ENST00000587945 LGALS4P56470 323 aa11.63□□□□□ -0.55
VMP1-206ENST00000587945 IL24Q13007 206 aa11.63□□□□□ -0.55
VMP1-206ENST00000587945 RDH10Q8IZV5 341 aa11.63□□□□□ -0.55
VMP1-206ENST00000587945 DYNAPQ8N1N2 210 aa11.63□□□□□ -0.55
VMP1-206ENST00000587945 EME1Q96AY2 570 aa11.63□□□□□ -0.55
VMP1-206ENST00000587945 PKIBQ9C010 78 aa11.63□□□□□ -0.55
VMP1-206ENST00000587945 PLEKHA1Q9HB21 404 aa11.63□□□□□ -0.55
VMP1-206ENST00000587945 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.63□□□□□ -0.55
VMP1-206ENST00000587945 NOTCH1P46531 2555 aa11.62□□□□□ -0.55
VMP1-206ENST00000587945 hCG_1809904A0A1W2PP81 198 aa11.62□□□□□ -0.55
VMP1-206ENST00000587945 A0A1W2PPE2 198 aa11.62□□□□□ -0.55
VMP1-206ENST00000587945 A0A1W2PR64 198 aa11.62□□□□□ -0.55
VMP1-206ENST00000587945 A0A1W2PRV1 198 aa11.62□□□□□ -0.55
VMP1-206ENST00000587945 SAC3D1A6NKF1 404 aa11.62□□□□□ -0.55
VMP1-206ENST00000587945 ZNF737O75373 536 aa11.62□□□□□ -0.55
VMP1-206ENST00000587945 ATP6V1E1P36543 226 aa11.62□□□□□ -0.55
VMP1-206ENST00000587945 KIR2DS4P43632 304 aa11.62□□□□□ -0.55
VMP1-206ENST00000587945 RAB13P51153 203 aa11.62□□□□□ -0.55
VMP1-206ENST00000587945 EFNB2P52799 333 aa11.62□□□□□ -0.55
VMP1-206ENST00000587945 EDDM3BP56851 147 aa11.62□□□□□ -0.55
VMP1-206ENST00000587945 C2orf68Q2NKX9 166 aa11.62□□□□□ -0.55
VMP1-206ENST00000587945 TP53I3Q53FA7 332 aa11.62□□□□□ -0.55
VMP1-206ENST00000587945 OR4C13Q8NGP0 309 aa11.62□□□□□ -0.55
VMP1-206ENST00000587945 CEP19Q96LK0 163 aa11.62□□□□□ -0.55
VMP1-206ENST00000587945 NKX3-1Q99801 234 aaPredicted RBP11.62□□□□□ -0.55
VMP1-206ENST00000587945 ADI1Q9BV57 179 aa11.62□□□□□ -0.55
VMP1-206ENST00000587945 IL36RNQ9UBH0 155 aa11.62□□□□□ -0.55
VMP1-206ENST00000587945 ENOPH1Q9UHY7 261 aa11.62□□□□□ -0.55
VMP1-206ENST00000587945 OAZ3Q9UMX2 235 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms