RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 FAM189A2Q15884 450 aa15.65■□□□□ 0.1
TRAF4-216ENST00000586813 PLA1AQ53H76 456 aa15.65■□□□□ 0.1
TRAF4-216ENST00000586813 BCL2L15Q5TBC7 163 aa15.65■□□□□ 0.1
TRAF4-216ENST00000586813 ASRGL1Q7L266 308 aa15.65■□□□□ 0.1
TRAF4-216ENST00000586813 LYG1Q8N1E2 194 aa15.65■□□□□ 0.1
TRAF4-216ENST00000586813 DNAJC9Q8WXX5 260 aa15.65■□□□□ 0.1
TRAF4-216ENST00000586813 FOXRED1Q96CU9 486 aaPredicted RBP15.65■□□□□ 0.1
TRAF4-216ENST00000586813 PAPOLBQ9NRJ5 636 aaKnown RBP15.65■□□□□ 0.1
TRAF4-216ENST00000586813 SERTAD4Q9NUC0 356 aa15.65■□□□□ 0.1
TRAF4-216ENST00000586813 DNAJB9Q9UBS3 223 aa15.65■□□□□ 0.1
TRAF4-216ENST00000586813 V9GYS6 101 aa15.65■□□□□ 0.1
TRAF4-216ENST00000586813 C17orf98A8MV24 154 aa15.64■□□□□ 0.09
TRAF4-216ENST00000586813 ODF3BA8MYP8 253 aa15.64■□□□□ 0.09
TRAF4-216ENST00000586813 PRKYO43930 277 aa15.64■□□□□ 0.09
TRAF4-216ENST00000586813 CRISP1P54107 249 aa15.64■□□□□ 0.09
TRAF4-216ENST00000586813 CXCR4P61073 352 aa15.64■□□□□ 0.09
TRAF4-216ENST00000586813 CBX1P83916 185 aa15.64■□□□□ 0.09
TRAF4-216ENST00000586813 ZNF322Q6U7Q0 402 aaPredicted RBP15.64■□□□□ 0.09
TRAF4-216ENST00000586813 CCBE1Q6UXH8 406 aaPredicted RBP15.64■□□□□ 0.09
TRAF4-216ENST00000586813 Q6ZPA2 131 aa15.64■□□□□ 0.09
TRAF4-216ENST00000586813 PLEKHG7Q6ZR37 379 aa15.64■□□□□ 0.09
TRAF4-216ENST00000586813 REC114Q7Z4M0 266 aa15.64■□□□□ 0.09
TRAF4-216ENST00000586813 ELMOD2Q8IZ81 293 aa15.64■□□□□ 0.09
TRAF4-216ENST00000586813 Q8N2B8 174 aa15.64■□□□□ 0.09
TRAF4-216ENST00000586813 OR14K1Q8NGZ2 314 aa15.64■□□□□ 0.09
TRAF4-216ENST00000586813 APOL4Q9BPW4 351 aa15.64■□□□□ 0.09
TRAF4-216ENST00000586813 CDCA4Q9BXL8 241 aa15.64■□□□□ 0.09
TRAF4-216ENST00000586813 OR52A1Q9UKL2 312 aa15.64■□□□□ 0.09
TRAF4-216ENST00000586813 TBL2Q9Y4P3 447 aaKnown RBP15.64■□□□□ 0.09
TRAF4-216ENST00000586813 R4GMQ9 66 aa15.64■□□□□ 0.09
TRAF4-216ENST00000586813 A0A1B0GTI1 187 aa15.63■□□□□ 0.09
TRAF4-216ENST00000586813 A6NIN4 97 aa15.63■□□□□ 0.09
TRAF4-216ENST00000586813 DHRS7CA6NNS2 312 aa15.63■□□□□ 0.09
TRAF4-216ENST00000586813 K7N7A8 449 aa15.63■□□□□ 0.09
TRAF4-216ENST00000586813 MAGEB4O15481 346 aaPredicted RBP15.63■□□□□ 0.09
TRAF4-216ENST00000586813 FKBP6O75344 327 aa15.63■□□□□ 0.09
TRAF4-216ENST00000586813 ARG1P05089 322 aa15.63■□□□□ 0.09
TRAF4-216ENST00000586813 RAB13P51153 203 aa15.63■□□□□ 0.09
TRAF4-216ENST00000586813 ERVK11-1P61568 191 aa15.63■□□□□ 0.09
TRAF4-216ENST00000586813 NSUN5P1Q3KNT7 163 aa15.63■□□□□ 0.09
TRAF4-216ENST00000586813 Q6ZSR3 168 aa15.63■□□□□ 0.09
TRAF4-216ENST00000586813 SPATA24Q86W54 205 aa15.63■□□□□ 0.09
TRAF4-216ENST00000586813 ANGPTL5Q86XS5 388 aa15.63■□□□□ 0.09
TRAF4-216ENST00000586813 CCDC197Q8NCU1 140 aa15.63■□□□□ 0.09
TRAF4-216ENST00000586813 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.63■□□□□ 0.092e-9■■■■■ 40.4
TRAF4-216ENST00000586813 A6NDX4 124 aa15.62■□□□□ 0.09
TRAF4-216ENST00000586813 PIN1P1O15428 100 aa15.62■□□□□ 0.09
TRAF4-216ENST00000586813 FAM107AO95990 144 aa15.62■□□□□ 0.09
TRAF4-216ENST00000586813 RBP4P02753 201 aa15.62■□□□□ 0.09
TRAF4-216ENST00000586813 CD28P10747 220 aa15.62■□□□□ 0.09
TRAF4-216ENST00000586813 ACTR3P61158 418 aa15.62■□□□□ 0.09
TRAF4-216ENST00000586813 COL10A1Q03692 680 aa15.62■□□□□ 0.09
TRAF4-216ENST00000586813 IL24Q13007 206 aa15.62■□□□□ 0.09
TRAF4-216ENST00000586813 FLOT2Q14254 428 aa15.62■□□□□ 0.09
TRAF4-216ENST00000586813 PTGES3Q15185 160 aaKnown RBP15.62■□□□□ 0.09
TRAF4-216ENST00000586813 CNN3Q15417 329 aaKnown RBP15.62■□□□□ 0.09
TRAF4-216ENST00000586813 LDLRAD2Q5SZI1 272 aa15.62■□□□□ 0.09
TRAF4-216ENST00000586813 ZNF626Q68DY1 528 aa15.62■□□□□ 0.09
TRAF4-216ENST00000586813 FAHD1Q6P587 224 aa15.62■□□□□ 0.09
TRAF4-216ENST00000586813 MEPCEQ7L2J0 689 aaKnown RBP15.62■□□□□ 0.09
TRAF4-216ENST00000586813 BCDIN3DQ7Z5W3 292 aaKnown RBP15.62■□□□□ 0.09
TRAF4-216ENST00000586813 TMEM219Q86XT9 240 aa15.62■□□□□ 0.09
TRAF4-216ENST00000586813 SLC35F2Q8IXU6 374 aa15.62■□□□□ 0.09
TRAF4-216ENST00000586813 ASCC1Q8N9N2 400 aaKnown RBP15.62■□□□□ 0.09
TRAF4-216ENST00000586813 OR4S1Q8NGB4 309 aa15.62■□□□□ 0.09
TRAF4-216ENST00000586813 OR13D1Q8NGV5 346 aa15.62■□□□□ 0.09
TRAF4-216ENST00000586813 RPS4Y2Q8TD47 263 aa15.62■□□□□ 0.09
TRAF4-216ENST00000586813 MNTQ99583 582 aa15.62■□□□□ 0.09
TRAF4-216ENST00000586813 PRRG3Q9BZD7 231 aa15.62■□□□□ 0.09
TRAF4-216ENST00000586813 PKIBQ9C010 78 aa15.62■□□□□ 0.09
TRAF4-216ENST00000586813 ADGRL4Q9HBW9 690 aa15.62■□□□□ 0.09
TRAF4-216ENST00000586813 ABCB10Q9NRK6 738 aa15.62■□□□□ 0.09
TRAF4-216ENST00000586813 SLC22A13Q9Y226 551 aa15.62■□□□□ 0.09
TRAF4-216ENST00000586813 SNX5Q9Y5X3 404 aa15.62■□□□□ 0.09
TRAF4-216ENST00000586813 DNAH3Q8TD57 4116 aa15.61■□□□□ 0.09
TRAF4-216ENST00000586813 MEX3AA1L020 520 aaKnown RBP15.61■□□□□ 0.09
TRAF4-216ENST00000586813 M0R129 80 aa15.61■□□□□ 0.09
TRAF4-216ENST00000586813 ZNF737O75373 536 aa15.61■□□□□ 0.09
TRAF4-216ENST00000586813 ZNF728P0DKX0 622 aa15.61■□□□□ 0.09
TRAF4-216ENST00000586813 EDDM3BP56851 147 aa15.61■□□□□ 0.09
TRAF4-216ENST00000586813 SSX2Q16385 188 aa15.61■□□□□ 0.09
TRAF4-216ENST00000586813 OXLD1Q5BKU9 147 aa15.61■□□□□ 0.09
TRAF4-216ENST00000586813 NDUFA11Q86Y39 141 aa15.61■□□□□ 0.09
TRAF4-216ENST00000586813 OR11H6Q8NGC7 330 aa15.61■□□□□ 0.09
TRAF4-216ENST00000586813 TRMT10AQ8TBZ6 339 aaKnown RBP15.61■□□□□ 0.09
TRAF4-216ENST00000586813 WIPF2Q8TF74 440 aaPredicted RBP15.61■□□□□ 0.09
TRAF4-216ENST00000586813 MALSU1Q96EH3 234 aa15.61■□□□□ 0.09
TRAF4-216ENST00000586813 NRBF2Q96F24 287 aa15.61■□□□□ 0.09
TRAF4-216ENST00000586813 MMP28Q9H239 520 aa15.61■□□□□ 0.09
TRAF4-216ENST00000586813 MRM2Q9UI43 246 aaKnown RBP15.61■□□□□ 0.09
TRAF4-216ENST00000586813 PITPNC1Q9UKF7 332 aa15.61■□□□□ 0.09
TRAF4-216ENST00000586813 TCRBV3S1A0A5B6 114 aa15.6■□□□□ 0.09
TRAF4-216ENST00000586813 ZNF670-ZNF695F2Z2N8 137 aa15.6■□□□□ 0.09
TRAF4-216ENST00000586813 XPNPEP2O43895 674 aa15.6■□□□□ 0.09
TRAF4-216ENST00000586813 IGHV1-8P0DP01 117 aa15.6■□□□□ 0.09
TRAF4-216ENST00000586813 CCL1P22362 96 aa15.6■□□□□ 0.09
TRAF4-216ENST00000586813 DAPP51397 102 aa15.6■□□□□ 0.09
TRAF4-216ENST00000586813 EMX1Q04741 257 aaPredicted RBP15.6■□□□□ 0.09
TRAF4-216ENST00000586813 AADACL4Q5VUY2 407 aa15.6■□□□□ 0.09
TRAF4-216ENST00000586813 NXNL2Q5VZ03 156 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms