RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 TRAPPC6BQ86SZ2 158 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 TMEM200AQ86VY9 491 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 TMEM17Q86X19 198 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 CENPSQ8N2Z9 138 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 DTX3Q8N9I9 347 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 OR2Z1Q8NG97 314 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 OR11L1Q8NGX0 322 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 SVIPQ8NHG7 77 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 CHPT1Q8WUD6 406 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 DVL3Q92997 716 aaPredicted RBP5.3□□□□□ -1.56
LIG3-206ENST00000586058 SLAMF9Q96A28 289 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 DACT3Q96B18 629 aaPredicted RBP5.3□□□□□ -1.56
LIG3-206ENST00000586058 ELMOD3Q96FG2 381 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 NKX3-1Q99801 234 aaPredicted RBP5.3□□□□□ -1.56
LIG3-206ENST00000586058 OCSTAMPQ9BR26 566 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 TM2D1Q9BX74 207 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 EGLN1Q9GZT9 426 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 POFUT1Q9H488 388 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 PPP1R3EQ9H7J1 279 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 ZNF442Q9H7R0 627 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 AUNIPQ9H7T9 357 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 CHMP1AQ9HD42 196 aaPredicted RBP5.3□□□□□ -1.56
LIG3-206ENST00000586058 CA10Q9NS85 328 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 ZNF701Q9NV72 531 aaPredicted RBP5.3□□□□□ -1.56
LIG3-206ENST00000586058 FAIMQ9NVQ4 179 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 MCUBQ9NWR8 336 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 PGPEP1Q9NXJ5 209 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 NPAP1Q9NZP6 1156 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 ZNF107Q9UII5 783 aaPredicted RBP5.3□□□□□ -1.56
LIG3-206ENST00000586058 ZDHHC8Q9ULC8 765 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 ST3GAL6Q9Y274 331 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 RNF115Q9Y4L5 304 aa5.3□□□□□ -1.56
LIG3-206ENST00000586058 DCHS1Q96JQ0 3298 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 ANKRD11Q6UB99 2663 aaPredicted RBP5.29□□□□□ -1.56
LIG3-206ENST00000586058 TMEM235A6NFC5 223 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 DISC1C4P0D8 188 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 H7C1Q1 480 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 M0R233 179 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 LDLRAD4O15165 306 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 ANGPTL7O43827 346 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 ORC5O43913 435 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 PDCD6O75340 191 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 OR7C1O76099 320 aaPredicted RBP5.29□□□□□ -1.56
LIG3-206ENST00000586058 NXPH2O95156 264 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 DHFRP00374 187 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 IGHV3-13P01766 116 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 IFNA6P05013 189 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 GRPP07492 148 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 ZNF250P15622 560 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 TBPP20226 339 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 GNLYP22749 145 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 ANOS1P23352 680 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 MDH2P40926 338 aaKnown RBP5.29□□□□□ -1.56
LIG3-206ENST00000586058 KIR2DL3P43628 341 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 ZNF81P51508 661 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 TAS2R46P59540 309 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 FGF12P61328 243 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 SNRPD2P62316 118 aaKnown RBP5.29□□□□□ -1.56
LIG3-206ENST00000586058 ADORA2A-AS1P86434 159 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 IKZF1Q13422 519 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 IL13RA2Q14627 380 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 ZMYND11Q15326 602 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 SMIM21Q3B7S5 101 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 CDNFQ49AH0 187 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 RNASE10Q5GAN6 216 aaKnown RBP5.29□□□□□ -1.56
LIG3-206ENST00000586058 DMRTC1Q5HYR2 192 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 SPIN3Q5JUX0 258 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 ADAM5Q6NVV9 412 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 ZNF782Q6ZMW2 699 aaPredicted RBP5.29□□□□□ -1.56
LIG3-206ENST00000586058 LYPD6Q86Y78 171 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 CELF2-AS1Q8N7Q2 184 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 OR10AD1Q8NGE0 317 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 OR10K1Q8NGX5 313 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 OR52I2Q8NH67 350 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 SSC4DQ8WTU2 575 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 HPSE2Q8WWQ2 592 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 YIPF5Q969M3 257 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 MRPL24Q96A35 216 aaKnown RBP5.29□□□□□ -1.56
LIG3-206ENST00000586058 PLPPR2Q96GM1 343 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 Q96M66 194 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 ABHD1Q96SE0 405 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 SYT3Q9BQG1 590 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 NICN1Q9BSH3 213 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 LPAR5Q9H1C0 372 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 FN3KRPQ9HA64 309 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 RBFOX1Q9NWB1 397 aaKnown RBP5.29□□□□□ -1.56
LIG3-206ENST00000586058 TAAR3PQ9P1P4 343 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 DNAJB11Q9UBS4 358 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 SCP2D1Q9UJQ7 156 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 HSF4Q9ULV5 492 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 FZR1Q9UM11 496 aa5.29□□□□□ -1.56
LIG3-206ENST00000586058 FRYQ5TBA9 3013 aa5.28□□□□□ -1.56
LIG3-206ENST00000586058 IGLV3-9A0A075B6K5 115 aa5.28□□□□□ -1.56
LIG3-206ENST00000586058 IGKV1-27A0A075B6S5 117 aa5.28□□□□□ -1.56
LIG3-206ENST00000586058 ANKRD20A5PA0PJZ0 165 aa5.28□□□□□ -1.56
LIG3-206ENST00000586058 LRRC30A6NM36 301 aa5.28□□□□□ -1.56
LIG3-206ENST00000586058 ZNF736B4DX44 427 aaPredicted RBP5.28□□□□□ -1.56
LIG3-206ENST00000586058 B8ZZF3 427 aa5.28□□□□□ -1.56
LIG3-206ENST00000586058 MCRIP1C9JLW8 97 aa5.28□□□□□ -1.56
LIG3-206ENST00000586058 F5H5P2 479 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms