RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 HYDINQ4G0P3 5121 aa14.55□□□□□ -0.08
TOP3A-220ENST00000585031 OR6C68A6NDL8 312 aa14.54□□□□□ -0.08
TOP3A-220ENST00000585031 CCDC160A6NGH7 325 aa14.54□□□□□ -0.08
TOP3A-220ENST00000585031 SIGLEC5O15389 551 aa14.54□□□□□ -0.08
TOP3A-220ENST00000585031 ACAA1P09110 424 aaPredicted RBP14.54□□□□□ -0.08
TOP3A-220ENST00000585031 HIST1H1CP16403 213 aaKnown RBP14.54□□□□□ -0.08
TOP3A-220ENST00000585031 GRK5P34947 590 aa14.54□□□□□ -0.08
TOP3A-220ENST00000585031 PRKXP51817 358 aa14.54□□□□□ -0.08
TOP3A-220ENST00000585031 CAV3P56539 151 aa14.54□□□□□ -0.08
TOP3A-220ENST00000585031 FAM3AP98173 230 aa14.54□□□□□ -0.08
TOP3A-220ENST00000585031 CNN3Q15417 329 aaKnown RBP14.54□□□□□ -0.08
TOP3A-220ENST00000585031 NEDD8Q15843 81 aa14.54□□□□□ -0.08
TOP3A-220ENST00000585031 KLHL12Q53G59 568 aa14.54□□□□□ -0.08
TOP3A-220ENST00000585031 NKAPLQ5M9Q1 402 aa14.54□□□□□ -0.08
TOP3A-220ENST00000585031 CASC10Q5T4H9 136 aa14.54□□□□□ -0.08
TOP3A-220ENST00000585031 DNM1P34Q6PK57 102 aa14.54□□□□□ -0.08
TOP3A-220ENST00000585031 PRSS48Q7RTY5 328 aa14.54□□□□□ -0.08
TOP3A-220ENST00000585031 OR2T33Q8NG76 320 aa14.54□□□□□ -0.08
TOP3A-220ENST00000585031 OR5AU1Q8NGC0 362 aa14.54□□□□□ -0.08
TOP3A-220ENST00000585031 OR4K13Q8NH42 304 aa14.54□□□□□ -0.08
TOP3A-220ENST00000585031 FANK1Q8TC84 345 aa14.54□□□□□ -0.08
TOP3A-220ENST00000585031 SPSB4Q96A44 273 aa14.54□□□□□ -0.08
TOP3A-220ENST00000585031 DGCR14Q96DF8 476 aaKnown RBP14.54□□□□□ -0.08
TOP3A-220ENST00000585031 ERMAPQ96PL5 475 aaPredicted RBP14.54□□□□□ -0.08
TOP3A-220ENST00000585031 COPS4Q9BT78 406 aa14.54□□□□□ -0.08
TOP3A-220ENST00000585031 EGLN3Q9H6Z9 239 aa14.54□□□□□ -0.08
TOP3A-220ENST00000585031 C19orf12Q9NSK7 152 aa14.54□□□□□ -0.08
TOP3A-220ENST00000585031 TVP23BQ9NYZ1 205 aa14.54□□□□□ -0.08
TOP3A-220ENST00000585031 CNOT2Q9NZN8 540 aaKnown RBP14.54□□□□□ -0.08
TOP3A-220ENST00000585031 PSORS1C1Q9UIG5 152 aa14.54□□□□□ -0.08
TOP3A-220ENST00000585031 BAIAP2Q9UQB8 552 aa14.54□□□□□ -0.08
TOP3A-220ENST00000585031 TCF19Q9Y242 345 aa14.54□□□□□ -0.08
TOP3A-220ENST00000585031 STARD9Q9P2P6 4700 aa14.54□□□□□ -0.08
TOP3A-220ENST00000585031 TRBV23-1A0A0A0MS06 115 aa14.53□□□□□ -0.08
TOP3A-220ENST00000585031 NKX6-3A6NJ46 265 aa14.53□□□□□ -0.08
TOP3A-220ENST00000585031 FAM90A8PA6NJQ4 464 aa14.53□□□□□ -0.08
TOP3A-220ENST00000585031 VGLL3A8MV65 326 aa14.53□□□□□ -0.08
TOP3A-220ENST00000585031 AKR7A2O43488 359 aa14.53□□□□□ -0.08
TOP3A-220ENST00000585031 PF4V1P10720 104 aa14.53□□□□□ -0.08
TOP3A-220ENST00000585031 MZT1Q08AG7 82 aa14.53□□□□□ -0.08
TOP3A-220ENST00000585031 SNAPC1Q16533 368 aa14.53□□□□□ -0.08
TOP3A-220ENST00000585031 SMN1Q16637 294 aaKnown RBP14.53□□□□□ -0.08
TOP3A-220ENST00000585031 SLC25A30Q5SVS4 291 aa14.53□□□□□ -0.08
TOP3A-220ENST00000585031 DRAM2Q6UX65 266 aa14.53□□□□□ -0.08
TOP3A-220ENST00000585031 AHSA2Q719I0 299 aa14.53□□□□□ -0.08
TOP3A-220ENST00000585031 IQCF1Q8N6M8 205 aa14.53□□□□□ -0.08
TOP3A-220ENST00000585031 TCEANCQ8N8B7 351 aa14.53□□□□□ -0.08
TOP3A-220ENST00000585031 ZNRF1Q8ND25 227 aa14.53□□□□□ -0.08
TOP3A-220ENST00000585031 OR5D13Q8NGL4 314 aa14.53□□□□□ -0.08
TOP3A-220ENST00000585031 FCGR1BQ92637 280 aa14.53□□□□□ -0.08
TOP3A-220ENST00000585031 RPL3LQ92901 407 aaKnown RBP14.53□□□□□ -0.08
TOP3A-220ENST00000585031 SPTSSAQ969W0 71 aa14.53□□□□□ -0.08
TOP3A-220ENST00000585031 NDEL1Q9GZM8 345 aa14.53□□□□□ -0.08
TOP3A-220ENST00000585031 DNTTIP1Q9H147 329 aa14.53□□□□□ -0.08
TOP3A-220ENST00000585031 AASSQ9UDR5 926 aa14.53□□□□□ -0.08
TOP3A-220ENST00000585031 RPL36Q9Y3U8 105 aaKnown RBP14.53□□□□□ -0.08
TOP3A-220ENST00000585031 IGKV1D-17A0A075B6S4 117 aa14.52□□□□□ -0.09
TOP3A-220ENST00000585031 IRGMA1A4Y4 181 aa14.52□□□□□ -0.09
TOP3A-220ENST00000585031 SYNGR1O43759 233 aa14.52□□□□□ -0.09
TOP3A-220ENST00000585031 NOL3O60936 208 aaKnown RBP14.52□□□□□ -0.09
TOP3A-220ENST00000585031 PIPP12273 146 aaPredicted RBP14.52□□□□□ -0.09
TOP3A-220ENST00000585031 NAA10P41227 235 aaPredicted RBP14.52□□□□□ -0.09
TOP3A-220ENST00000585031 DCTN2Q13561 401 aaKnown RBP14.52□□□□□ -0.09
TOP3A-220ENST00000585031 KLHL22Q53GT1 634 aa14.52□□□□□ -0.09
TOP3A-220ENST00000585031 SMARCD3Q6STE5 483 aa14.52□□□□□ -0.09
TOP3A-220ENST00000585031 C10orf99Q6UWK7 81 aa14.52□□□□□ -0.09
TOP3A-220ENST00000585031 SLC16A9Q7RTY1 509 aa14.52□□□□□ -0.09
TOP3A-220ENST00000585031 RNF144BQ7Z419 303 aa14.52□□□□□ -0.09
TOP3A-220ENST00000585031 STX19Q8N4C7 294 aa14.52□□□□□ -0.09
TOP3A-220ENST00000585031 OR8D4Q8NGM9 314 aa14.52□□□□□ -0.09
TOP3A-220ENST00000585031 TMEM163Q8TC26 289 aa14.52□□□□□ -0.09
TOP3A-220ENST00000585031 MED30Q96HR3 178 aa14.52□□□□□ -0.09
TOP3A-220ENST00000585031 IL4I1Q96RQ9 567 aa14.52□□□□□ -0.09
TOP3A-220ENST00000585031 PRSS22Q9GZN4 317 aa14.52□□□□□ -0.09
TOP3A-220ENST00000585031 OR52D1Q9H346 318 aa14.52□□□□□ -0.09
TOP3A-220ENST00000585031 PAK1IP1Q9NWT1 392 aaPredicted RBP14.52□□□□□ -0.09
TOP3A-220ENST00000585031 RHBDD3Q9Y3P4 386 aa14.52□□□□□ -0.09
TOP3A-220ENST00000585031 TVP23AA6NH52 213 aa14.51□□□□□ -0.09
TOP3A-220ENST00000585031 ANKRD30BLA7E2S9 258 aa14.51□□□□□ -0.09
TOP3A-220ENST00000585031 M0R129 80 aa14.51□□□□□ -0.09
TOP3A-220ENST00000585031 HLA-DQA2P01906 255 aa14.51□□□□□ -0.09
TOP3A-220ENST00000585031 PF4P02776 101 aa14.51□□□□□ -0.09
TOP3A-220ENST00000585031 MT-ND2P03891 347 aa14.51□□□□□ -0.09
TOP3A-220ENST00000585031 CDK1P06493 297 aa14.51□□□□□ -0.09
TOP3A-220ENST00000585031 HTR1AP08908 422 aa14.51□□□□□ -0.09
TOP3A-220ENST00000585031 COX7A1P24310 79 aa14.51□□□□□ -0.09
TOP3A-220ENST00000585031 SLC6A6P31641 620 aa14.51□□□□□ -0.09
TOP3A-220ENST00000585031 PYCR1P32322 319 aa14.51□□□□□ -0.09
TOP3A-220ENST00000585031 FAM185AQ8N0U4 392 aa14.51□□□□□ -0.09
TOP3A-220ENST00000585031 GGHQ92820 318 aa14.51□□□□□ -0.09
TOP3A-220ENST00000585031 SGK3Q96BR1 496 aa14.51□□□□□ -0.09
TOP3A-220ENST00000585031 FKBP14Q9NWM8 211 aa14.51□□□□□ -0.09
TOP3A-220ENST00000585031 ZNF319Q9P2F9 582 aa14.51□□□□□ -0.09
TOP3A-220ENST00000585031 ZNF222Q9UK12 451 aa14.51□□□□□ -0.09
TOP3A-220ENST00000585031 ENTPD6O75354 484 aa14.5□□□□□ -0.09
TOP3A-220ENST00000585031 NOS3P29474 1203 aa14.5□□□□□ -0.09
TOP3A-220ENST00000585031 DDOSTP39656 456 aa14.5□□□□□ -0.09
TOP3A-220ENST00000585031 VDAC2P45880 294 aaPredicted RBP14.5□□□□□ -0.09
TOP3A-220ENST00000585031 LINC00482Q8N8I6 264 aa14.5□□□□□ -0.09
TOP3A-220ENST00000585031 SDR9C7Q8NEX9 313 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms