RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 BORCS8Q96FH0 119 aa16.81■□□□□ 0.28
SS18-224ENST00000584083 RDH12Q96NR8 316 aa16.81■□□□□ 0.28
SS18-224ENST00000584083 SIRT7Q9NRC8 400 aa16.81■□□□□ 0.28
SS18-224ENST00000584083 TNFRSF19Q9NS68 423 aa16.81■□□□□ 0.28
SS18-224ENST00000584083 OR14J1Q9UGF5 321 aa16.81■□□□□ 0.28
SS18-224ENST00000584083 RPL36Q9Y3U8 105 aaKnown RBP16.81■□□□□ 0.28
SS18-224ENST00000584083 CEBPDP49716 269 aaPredicted RBP16.8■□□□□ 0.28
SS18-224ENST00000584083 COMPP49747 757 aaPredicted RBP16.8■□□□□ 0.28
SS18-224ENST00000584083 CCR9P51686 369 aa16.8■□□□□ 0.28
SS18-224ENST00000584083 RAB40BQ12829 278 aa16.8■□□□□ 0.28
SS18-224ENST00000584083 ALKBH1Q13686 389 aaKnown RBP16.8■□□□□ 0.28
SS18-224ENST00000584083 ZNF561Q8N587 486 aa16.8■□□□□ 0.28
SS18-224ENST00000584083 ZNF676Q8N7Q3 588 aa16.8■□□□□ 0.28
SS18-224ENST00000584083 ADAT3Q96EY9 351 aaPredicted RBP16.8■□□□□ 0.28
SS18-224ENST00000584083 NOX4Q9NPH5 578 aa16.8■□□□□ 0.28
SS18-224ENST00000584083 INPP5EQ9NRR6 644 aa16.8■□□□□ 0.28
SS18-224ENST00000584083 HHLA2Q9UM44 414 aa16.8■□□□□ 0.28
SS18-224ENST00000584083 IGKV1-27A0A075B6S5 117 aa16.79■□□□□ 0.28
SS18-224ENST00000584083 INMTO95050 263 aa16.79■□□□□ 0.28
SS18-224ENST00000584083 IGHA1P01876 353 aa16.79■□□□□ 0.28
SS18-224ENST00000584083 HKR1P10072 659 aa16.79■□□□□ 0.28
SS18-224ENST00000584083 CFPP27918 469 aa16.79■□□□□ 0.28
SS18-224ENST00000584083 PRB3Q04118 309 aaPredicted RBP16.79■□□□□ 0.28
SS18-224ENST00000584083 BLMHQ13867 455 aa16.79■□□□□ 0.28
SS18-224ENST00000584083 RCN1Q15293 331 aa16.79■□□□□ 0.28
SS18-224ENST00000584083 KLHL22Q53GT1 634 aa16.79■□□□□ 0.28
SS18-224ENST00000584083 LPCAT4Q643R3 524 aa16.79■□□□□ 0.28
SS18-224ENST00000584083 Q6YL49 198 aa16.79■□□□□ 0.28
SS18-224ENST00000584083 FAM185AQ8N0U4 392 aa16.79■□□□□ 0.28
SS18-224ENST00000584083 Q8N7P7 452 aa16.79■□□□□ 0.28
SS18-224ENST00000584083 OR52I1Q8NGK6 324 aa16.79■□□□□ 0.28
SS18-224ENST00000584083 OR13C3Q8NGS6 347 aa16.79■□□□□ 0.28
SS18-224ENST00000584083 CEP19Q96LK0 163 aa16.79■□□□□ 0.28
SS18-224ENST00000584083 PRDM13Q9H4Q3 707 aa16.79■□□□□ 0.28
SS18-224ENST00000584083 ISG20L2Q9H9L3 353 aaKnown RBP16.79■□□□□ 0.28
SS18-224ENST00000584083 HES4Q9HCC6 221 aa16.79■□□□□ 0.28
SS18-224ENST00000584083 ERVK13-1Q9NX77 482 aa16.79■□□□□ 0.28
SS18-224ENST00000584083 TENM1Q9UKZ4 2725 aa16.78■□□□□ 0.28
SS18-224ENST00000584083 TRBV23-1A0A0A0MS06 115 aa16.78■□□□□ 0.28
SS18-224ENST00000584083 OR4C45A6NMZ5 311 aa16.78■□□□□ 0.28
SS18-224ENST00000584083 KNG1P01042 644 aa16.78■□□□□ 0.28
SS18-224ENST00000584083 OCM2P0CE71 109 aa16.78■□□□□ 0.28
SS18-224ENST00000584083 OCMP0CE72 109 aaPredicted RBP16.78■□□□□ 0.28
SS18-224ENST00000584083 ATF1P18846 271 aa16.78■□□□□ 0.28
SS18-224ENST00000584083 RBP2P50120 134 aa16.78■□□□□ 0.28
SS18-224ENST00000584083 ATP1B3P54709 279 aa16.78■□□□□ 0.28
SS18-224ENST00000584083 DLX1P56177 255 aa16.78■□□□□ 0.28
SS18-224ENST00000584083 ERVK11-1P61568 191 aa16.78■□□□□ 0.28
SS18-224ENST00000584083 GUCA2AQ02747 115 aa16.78■□□□□ 0.28
SS18-224ENST00000584083 FOXL1Q12952 345 aa16.78■□□□□ 0.28
SS18-224ENST00000584083 AWAT1Q58HT5 328 aa16.78■□□□□ 0.28
SS18-224ENST00000584083 SLC25A26Q70HW3 274 aa16.78■□□□□ 0.28
SS18-224ENST00000584083 SYS1Q8N2H4 156 aa16.78■□□□□ 0.28
SS18-224ENST00000584083 OR10AC1Q8NH08 325 aa16.78■□□□□ 0.28
SS18-224ENST00000584083 APH1BQ8WW43 257 aa16.78■□□□□ 0.28
SS18-224ENST00000584083 CYGBQ8WWM9 190 aa16.78■□□□□ 0.28
SS18-224ENST00000584083 SLAMF9Q96A28 289 aa16.78■□□□□ 0.28
SS18-224ENST00000584083 MRPS18AQ9NVS2 196 aaKnown RBP16.78■□□□□ 0.28
SS18-224ENST00000584083 MTCH1Q9NZJ7 389 aa16.78■□□□□ 0.28
SS18-224ENST00000584083 FAM96BQ9Y3D0 163 aa16.78■□□□□ 0.28
SS18-224ENST00000584083 A0A0U1RQK1 487 aa16.77■□□□□ 0.28
SS18-224ENST00000584083 A0A1W2PRD5 423 aa16.77■□□□□ 0.28
SS18-224ENST00000584083 A0A1W2PRF3 423 aa16.77■□□□□ 0.28
SS18-224ENST00000584083 A0A1W2PRM7 423 aa16.77■□□□□ 0.28
SS18-224ENST00000584083 H0YAE9 185 aa16.77■□□□□ 0.28
SS18-224ENST00000584083 M0R1W7 72 aa16.77■□□□□ 0.28
SS18-224ENST00000584083 MELTFP08582 738 aa16.77■□□□□ 0.28
SS18-224ENST00000584083 PRKACBP22694 351 aa16.77■□□□□ 0.28
SS18-224ENST00000584083 EEF1B2P24534 225 aaKnown RBP16.77■□□□□ 0.28
SS18-224ENST00000584083 GBX2P52951 348 aaPredicted RBP16.77■□□□□ 0.28
SS18-224ENST00000584083 MTCP1P56278 107 aa16.77■□□□□ 0.28
SS18-224ENST00000584083 SMN1Q16637 294 aaKnown RBP16.77■□□□□ 0.28
SS18-224ENST00000584083 C16orf87Q6PH81 154 aa16.77■□□□□ 0.28
SS18-224ENST00000584083 METAP1DQ6UB28 335 aaPredicted RBP16.77■□□□□ 0.28
SS18-224ENST00000584083 C1orf122Q6ZSJ8 110 aa16.77■□□□□ 0.28
SS18-224ENST00000584083 DNAAF1Q8NEP3 725 aa16.77■□□□□ 0.28
SS18-224ENST00000584083 OR51A4Q8NGJ6 313 aa16.77■□□□□ 0.28
SS18-224ENST00000584083 METTL8Q9H825 291 aaKnown RBP16.77■□□□□ 0.28
SS18-224ENST00000584083 C8orf4Q9NR00 106 aa16.77■□□□□ 0.28
SS18-224ENST00000584083 IGKV1-9A0A0C4DH69 117 aa16.76■□□□□ 0.27
SS18-224ENST00000584083 F8VVB4 439 aa16.76■□□□□ 0.27
SS18-224ENST00000584083 F8VWA3 439 aa16.76■□□□□ 0.27
SS18-224ENST00000584083 RNASEK-C17orf49H0YIS7 233 aa16.76■□□□□ 0.27
SS18-224ENST00000584083 WBP4O75554 376 aaKnown RBP16.76■□□□□ 0.27
SS18-224ENST00000584083 CLIC3O95833 236 aa16.76■□□□□ 0.27
SS18-224ENST00000584083 CYB5AP00167 134 aa16.76■□□□□ 0.27
SS18-224ENST00000584083 AZGP1P25311 298 aaKnown RBP16.76■□□□□ 0.27
SS18-224ENST00000584083 POU3F4P49335 361 aa16.76■□□□□ 0.27
SS18-224ENST00000584083 RPL31P62899 125 aaKnown RBP16.76■□□□□ 0.27
SS18-224ENST00000584083 MRPL28Q13084 256 aaKnown RBP16.76■□□□□ 0.27
SS18-224ENST00000584083 KLRD1Q13241 179 aa16.76■□□□□ 0.27
SS18-224ENST00000584083 ZNF691Q5VV52 312 aa16.76■□□□□ 0.27
SS18-224ENST00000584083 TTC23Q5W5X9 447 aa16.76■□□□□ 0.27
SS18-224ENST00000584083 UTS2BQ765I0 119 aa16.76■□□□□ 0.27
SS18-224ENST00000584083 EGFL6Q8IUX8 553 aa16.76■□□□□ 0.27
SS18-224ENST00000584083 MKXQ8IYA7 352 aa16.76■□□□□ 0.27
SS18-224ENST00000584083 PIP4P2Q8N4L2 257 aa16.76■□□□□ 0.27
SS18-224ENST00000584083 C19orf12Q9NSK7 152 aa16.76■□□□□ 0.27
SS18-224ENST00000584083 E9PI62 339 aa16.75■□□□□ 0.27
SS18-224ENST00000584083 TK1P04183 234 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms