RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 IGKV1D-17A0A075B6S4 117 aa2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 SLC5A10A0PJK1 596 aa2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 TVP23AA6NH52 213 aa2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 OR6C70A6NIJ9 312 aa2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 SLC37A4O43826 429 aa2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 IGKV1-17P01599 117 aa2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 IGLV7-43P04211 117 aa2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 CD28P10747 220 aa2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 TGM4P49221 684 aa2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 IL5RAQ01344 420 aa2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 IGFBP7Q16270 282 aa2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 LINC00303Q3SY05 128 aa2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 SP6Q3SY56 376 aa2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 ZNF678Q5SXM1 525 aa2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 LIN9Q5TKA1 542 aa2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 RESP18Q5W5W9 173 aa2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 KCTD16Q68DU8 428 aa2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 FAHD1Q6P587 224 aa2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 RBM45Q8IUH3 476 aaKnown RBP2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 LRRC8AQ8IWT6 810 aa2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 OR5H2Q8NGV7 314 aa2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 CACNG8Q8WXS5 425 aa2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 METTL26Q96S19 204 aa2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 VAT1Q99536 393 aa2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 COPS4Q9BT78 406 aa2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 CHRNA10Q9GZZ6 450 aa2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 RAB1BQ9H0U4 201 aa2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 RDH14Q9HBH5 336 aa2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 ABCB9Q9NP78 766 aa2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 ACOT13Q9NPJ3 140 aa2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 C12orf4Q9NQ89 552 aa2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 RBM22Q9NW64 420 aaKnown RBP eCLIP2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 DNAJC27Q9NZQ0 273 aa2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 ANXA10Q9UJ72 324 aa2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 TUBGCP6Q96RT7 1819 aa2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 NUP214P35658 2090 aaPredicted RBP2.02□□□□□ -2.09
SMCHD1-209ENST00000583441 ADGRL1O94910 1474 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 RAB19A4D1S5 217 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 FAM25EA8MYX2 175 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 C16orf90A8MZG2 172 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 ZMPSTE24O75844 475 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 OR2A4O95047 310 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 IGKV1-39P01597 117 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 IGKV1D-39P04432 117 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 LIPCP11150 499 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 HLA-DMAP28067 261 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 RANBP1P43487 201 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 GDI2P50395 445 aaKnown RBP2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 ATP5J2P56134 94 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 VSNL1P62760 191 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 MEF2CQ06413 473 aaPredicted RBP2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 C18orf21Q32NC0 220 aaPredicted RBP2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 FBXO48Q5FWF7 155 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 CLEC12AQ5QGZ9 265 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 KPRPQ5T749 579 aaPredicted RBP2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 CYP4Z1Q86W10 505 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 CCNYL1Q8N7R7 359 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 OR4K2Q8NGD2 314 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 OR8A1Q8NGG7 326 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 OR8K3Q8NH51 312 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 ZNF420Q8TAQ5 688 aaPredicted RBP2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 UBA3Q8TBC4 463 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 ZNF721Q8TF20 911 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 ADTRPQ96IZ2 230 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 SMIM8Q96KF7 97 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 QKIQ96PU8 341 aaKnown RBP eCLIP2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 SPACA5Q96QH8 159 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 OR2A7Q96R45 310 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 CIB1Q99828 191 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 MS4A8Q9BY19 250 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 GOLPH3Q9H4A6 298 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 LINC00574Q9H8X3 128 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 SDHAF3Q9NRP4 125 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 INIPQ9NRY2 104 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 CA10Q9NS85 328 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 DDIT4Q9NX09 232 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 SLC22A7Q9Y694 548 aa2.01□□□□□ -2.09
SMCHD1-209ENST00000583441 ELP1O95163 1332 aa2□□□□□ -2.09
SMCHD1-209ENST00000583441 IGKV1-6A0A0C4DH72 117 aa2□□□□□ -2.09
SMCHD1-209ENST00000583441 KIR2DS1A0A191URI9 304 aa2□□□□□ -2.09
SMCHD1-209ENST00000583441 GMNCA6NCL1 334 aa2□□□□□ -2.09
SMCHD1-209ENST00000583441 ZNF879B4DU55 563 aa2□□□□□ -2.09
SMCHD1-209ENST00000583441 CD5P06127 495 aa2□□□□□ -2.09
SMCHD1-209ENST00000583441 CDK1P06493 297 aa2□□□□□ -2.09
SMCHD1-209ENST00000583441 ACTL10Q5JWF8 245 aa2□□□□□ -2.09
SMCHD1-209ENST00000583441 APOBEC3HQ6NTF7 200 aaKnown RBP2□□□□□ -2.09
SMCHD1-209ENST00000583441 SSX6Q7RTT6 188 aa2□□□□□ -2.09
SMCHD1-209ENST00000583441 DAZ4Q86SG3 579 aaKnown RBP2□□□□□ -2.09
SMCHD1-209ENST00000583441 ITPRIPQ8IWB1 547 aa2□□□□□ -2.09
SMCHD1-209ENST00000583441 ZDHHC22Q8N966 263 aa2□□□□□ -2.09
SMCHD1-209ENST00000583441 SPERTQ8NA61 448 aa2□□□□□ -2.09
SMCHD1-209ENST00000583441 FAM57AQ8TBR7 257 aa2□□□□□ -2.09
SMCHD1-209ENST00000583441 HINT2Q9BX68 163 aa2□□□□□ -2.09
SMCHD1-209ENST00000583441 SND1-IT1Q9HBX3 110 aa2□□□□□ -2.09
SMCHD1-209ENST00000583441 DAZ1Q9NQZ3 744 aaKnown RBP2□□□□□ -2.09
SMCHD1-209ENST00000583441 PARP11Q9NR21 331 aa2□□□□□ -2.09
SMCHD1-209ENST00000583441 RMND1Q9NWS8 449 aa2□□□□□ -2.09
SMCHD1-209ENST00000583441 RBMX2Q9Y388 322 aaKnown RBP2□□□□□ -2.09
SMCHD1-209ENST00000583441 INSIG2Q9Y5U4 225 aa2□□□□□ -2.09
SMCHD1-209ENST00000583441 ZNF780BQ9Y6R6 833 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms