RNA–Protein interactions for RNA: ENST00000582232.1

GGA3-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-211ENST00000582232 MRI1Q9BV20 369 aa9.69□□□□□ -0.86
GGA3-211ENST00000582232 PLGRKTQ9HBL7 147 aa9.69□□□□□ -0.86
GGA3-211ENST00000582232 HES4Q9HCC6 221 aa9.69□□□□□ -0.86
GGA3-211ENST00000582232 PCDHB16Q9NRJ7 776 aa9.69□□□□□ -0.86
GGA3-211ENST00000582232 RASL12Q9NYN1 266 aa9.69□□□□□ -0.86
GGA3-211ENST00000582232 FBLN5Q9UBX5 448 aa9.69□□□□□ -0.86
GGA3-211ENST00000582232 MRPS28Q9Y2Q9 187 aaKnown RBP9.69□□□□□ -0.86
GGA3-211ENST00000582232 CSMD1Q96PZ7 3565 aa9.68□□□□□ -0.86
GGA3-211ENST00000582232 TRAPPC2LH3BP13 241 aa9.68□□□□□ -0.86
GGA3-211ENST00000582232 CDC14BO60729 498 aa9.68□□□□□ -0.86
GGA3-211ENST00000582232 BPNT1O95861 308 aa9.68□□□□□ -0.86
GGA3-211ENST00000582232 IRF2P14316 349 aa9.68□□□□□ -0.86
GGA3-211ENST00000582232 RORCP51449 518 aa9.68□□□□□ -0.86
GGA3-211ENST00000582232 BMXP51813 675 aa9.68□□□□□ -0.86
GGA3-211ENST00000582232 ATP5J2P56134 94 aa9.68□□□□□ -0.86
GGA3-211ENST00000582232 CAV3P56539 151 aa9.68□□□□□ -0.86
GGA3-211ENST00000582232 TMEM33P57088 247 aa9.68□□□□□ -0.86
GGA3-211ENST00000582232 QRFPP83859 136 aa9.68□□□□□ -0.86
GGA3-211ENST00000582232 DYNC1I2Q13409 638 aaKnown RBP9.68□□□□□ -0.86
GGA3-211ENST00000582232 RAB11BQ15907 218 aa9.68□□□□□ -0.86
GGA3-211ENST00000582232 AWAT2Q6E213 333 aa9.68□□□□□ -0.86
GGA3-211ENST00000582232 GLIPR1L1Q6UWM5 242 aa9.68□□□□□ -0.86
GGA3-211ENST00000582232 DNM1P46Q6ZS02 220 aa9.68□□□□□ -0.86
GGA3-211ENST00000582232 FAM90A1Q86YD7 464 aa9.68□□□□□ -0.86
GGA3-211ENST00000582232 TGIF2LYQ8IUE0 185 aa9.68□□□□□ -0.86
GGA3-211ENST00000582232 LRRC29Q8WV35 223 aa9.68□□□□□ -0.86
GGA3-211ENST00000582232 CCL17Q92583 94 aa9.68□□□□□ -0.86
GGA3-211ENST00000582232 SLAMF9Q96A28 289 aa9.68□□□□□ -0.86
GGA3-211ENST00000582232 KCTD12Q96CX2 325 aaKnown RBP9.68□□□□□ -0.86
GGA3-211ENST00000582232 MRPS24Q96EL2 167 aaKnown RBP9.68□□□□□ -0.86
GGA3-211ENST00000582232 POM121Q96HA1 1249 aa9.68□□□□□ -0.86
GGA3-211ENST00000582232 S100A13Q99584 98 aa9.68□□□□□ -0.86
GGA3-211ENST00000582232 NKX3-1Q99801 234 aaPredicted RBP9.68□□□□□ -0.86
GGA3-211ENST00000582232 BARHL1Q9BZE3 327 aa9.68□□□□□ -0.86
GGA3-211ENST00000582232 METTL9Q9H1A3 318 aa9.68□□□□□ -0.86
GGA3-211ENST00000582232 CHODLQ9H9P2 273 aa9.68□□□□□ -0.86
GGA3-211ENST00000582232 SMURF1Q9HCE7 757 aa9.68□□□□□ -0.86
GGA3-211ENST00000582232 CCDC59Q9P031 241 aaKnown RBP9.68□□□□□ -0.86
GGA3-211ENST00000582232 NPTNQ9Y639 398 aa9.68□□□□□ -0.86
GGA3-211ENST00000582232 CACNG2Q9Y698 323 aa9.68□□□□□ -0.86
GGA3-211ENST00000582232 hCG_1807616A0A1W2PRN6 198 aa9.67□□□□□ -0.86
GGA3-211ENST00000582232 SMIM30A4D0T7 59 aa9.67□□□□□ -0.86
GGA3-211ENST00000582232 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.67□□□□□ -0.86
GGA3-211ENST00000582232 LDLRAD4O15165 306 aa9.67□□□□□ -0.86
GGA3-211ENST00000582232 AKR7A2O43488 359 aa9.67□□□□□ -0.86
GGA3-211ENST00000582232 ANGPTL7O43827 346 aa9.67□□□□□ -0.86
GGA3-211ENST00000582232 LY6HO94772 140 aa9.67□□□□□ -0.86
GGA3-211ENST00000582232 PLATP00750 562 aa9.67□□□□□ -0.86
GGA3-211ENST00000582232 SFTPBP07988 381 aa9.67□□□□□ -0.86
GGA3-211ENST00000582232 CSF3P09919 207 aa9.67□□□□□ -0.86
GGA3-211ENST00000582232 CALCBP10092 127 aa9.67□□□□□ -0.86
GGA3-211ENST00000582232 ARSBP15848 533 aa9.67□□□□□ -0.86
GGA3-211ENST00000582232 ZNF182P17025 639 aaPredicted RBP9.67□□□□□ -0.86
GGA3-211ENST00000582232 BCL3P20749 454 aa9.67□□□□□ -0.86
GGA3-211ENST00000582232 GIFP27352 417 aa9.67□□□□□ -0.86
GGA3-211ENST00000582232 NPBWR2P48146 333 aa9.67□□□□□ -0.86
GGA3-211ENST00000582232 HNRNPA0Q13151 305 aaKnown RBP9.67□□□□□ -0.86
GGA3-211ENST00000582232 RSU1Q15404 277 aa9.67□□□□□ -0.86
GGA3-211ENST00000582232 DGUOKQ16854 277 aa9.67□□□□□ -0.86
GGA3-211ENST00000582232 NHLRC3Q5JS37 347 aa9.67□□□□□ -0.86
GGA3-211ENST00000582232 HES5Q5TA89 166 aa9.67□□□□□ -0.86
GGA3-211ENST00000582232 TEX36Q5VZQ5 186 aa9.67□□□□□ -0.86
GGA3-211ENST00000582232 OR2W3Q7Z3T1 314 aa9.67□□□□□ -0.86
GGA3-211ENST00000582232 CDH24Q86UP0 819 aa9.67□□□□□ -0.86
GGA3-211ENST00000582232 LURAP1LQ8IV03 231 aa9.67□□□□□ -0.86
GGA3-211ENST00000582232 OR51T1Q8NGJ9 327 aa9.67□□□□□ -0.86
GGA3-211ENST00000582232 PTX4Q96A99 478 aa9.67□□□□□ -0.86
GGA3-211ENST00000582232 FAM3DQ96BQ1 224 aa9.67□□□□□ -0.86
GGA3-211ENST00000582232 LIN7BQ9HAP6 207 aa9.67□□□□□ -0.86
GGA3-211ENST00000582232 SEBOXQ9HB31 216 aaPredicted RBP9.67□□□□□ -0.86
GGA3-211ENST00000582232 DCAF16Q9NXF7 216 aa9.67□□□□□ -0.86
GGA3-211ENST00000582232 ABRACLQ9P1F3 81 aa9.67□□□□□ -0.86
GGA3-211ENST00000582232 DAPK2Q9UIK4 370 aa9.67□□□□□ -0.86
GGA3-211ENST00000582232 ING4Q9UNL4 249 aa9.67□□□□□ -0.86
GGA3-211ENST00000582232 PPIAL4EA0A075B759 164 aa9.66□□□□□ -0.86
GGA3-211ENST00000582232 TMEM14DPA8MWL7 114 aa9.66□□□□□ -0.86
GGA3-211ENST00000582232 CLDN25C9JDP6 229 aa9.66□□□□□ -0.86
GGA3-211ENST00000582232 PPIAL4DF5H284 164 aa9.66□□□□□ -0.86
GGA3-211ENST00000582232 F8VVB4 439 aa9.66□□□□□ -0.86
GGA3-211ENST00000582232 F8VWA3 439 aa9.66□□□□□ -0.86
GGA3-211ENST00000582232 LYNX1G3V0Z9 82 aa9.66□□□□□ -0.86
GGA3-211ENST00000582232 NDUFS8O00217 210 aa9.66□□□□□ -0.86
GGA3-211ENST00000582232 SSX4O60224 188 aa9.66□□□□□ -0.86
GGA3-211ENST00000582232 NXPH2O95156 264 aa9.66□□□□□ -0.86
GGA3-211ENST00000582232 CYB5R3P00387 301 aaPredicted RBP9.66□□□□□ -0.86
GGA3-211ENST00000582232 PPIAL4FP0DN26 164 aa9.66□□□□□ -0.86
GGA3-211ENST00000582232 LYNX1P0DP58 116 aa9.66□□□□□ -0.86
GGA3-211ENST00000582232 VSIG8P0DPA2 414 aa9.66□□□□□ -0.86
GGA3-211ENST00000582232 SLC2A2P11168 524 aaPredicted RBP9.66□□□□□ -0.86
GGA3-211ENST00000582232 MUC1P15941 1255 aaPredicted RBP9.66□□□□□ -0.86
GGA3-211ENST00000582232 EGR1P18146 543 aa9.66□□□□□ -0.86
GGA3-211ENST00000582232 GLRA1P23415 457 aa9.66□□□□□ -0.86
GGA3-211ENST00000582232 SOX6P35712 828 aa9.66□□□□□ -0.86
GGA3-211ENST00000582232 PDLIM4P50479 330 aa9.66□□□□□ -0.86
GGA3-211ENST00000582232 DSCR9P59020 149 aa9.66□□□□□ -0.86
GGA3-211ENST00000582232 FGF12P61328 243 aa9.66□□□□□ -0.86
GGA3-211ENST00000582232 SMIM21Q3B7S5 101 aa9.66□□□□□ -0.86
GGA3-211ENST00000582232 C2orf76Q3KRA6 126 aa9.66□□□□□ -0.86
GGA3-211ENST00000582232 PRSS57Q6UWY2 283 aa9.66□□□□□ -0.86
GGA3-211ENST00000582232 ACP7Q6ZNF0 438 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms