RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	BEAN1	Q3B7T3	259 aa		9.42	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	ZBTB37	Q5TC79	503 aa		9.42	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	ZNF573	Q86YE8	665 aa		9.42	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	CALHM1	Q8IU99	346 aa		9.42	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	SLC35F2	Q8IXU6	374 aa		9.42	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	TCEANC	Q8N8B7	351 aa		9.42	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	ASCC1	Q8N9N2	400 aa	Known RBP	9.42	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	OR14K1	Q8NGZ2	314 aa		9.42	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	TBX5	Q99593	518 aa		9.42	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	NRIP2	Q9BQI9	281 aa		9.42	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	NPFFR1	Q9GZQ6	430 aa		9.42	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	RAB18	Q9NP72	206 aa		9.42	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	OR52A1	Q9UKL2	312 aa		9.42	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	POLDIP2	Q9Y2S7	368 aa		9.42	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	TMEM14A	Q9Y6G1	99 aa		9.42	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114		R4GMQ9	66 aa		9.42	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114		A0A1B0GTI1	187 aa		9.41	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	hCG_1809904	A0A1W2PP81	198 aa		9.41	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114		A0A1W2PPE2	198 aa		9.41	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	FAM230A	A0A1W2PPH8	454 aa		9.41	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114		A0A1W2PR64	198 aa		9.41	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114		A0A1W2PRV1	198 aa		9.41	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	ZNF670-ZNF695	F2Z2N8	137 aa		9.41	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	APOL3	O95236	402 aa		9.41	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	CD28	P10747	220 aa		9.41	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	JUNB	P17275	347 aa	Predicted RBP	9.41	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	EPHA2	P29317	976 aa		9.41	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	EDDM3B	P56851	147 aa		9.41	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	DYNC1I2	Q13409	638 aa	Known RBP	9.41	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	PTGES3	Q15185	160 aa	Known RBP	9.41	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	TMEM42	Q69YG0	159 aa		9.41	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	CCBE1	Q6UXH8	406 aa	Predicted RBP	9.41	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	MEPCE	Q7L2J0	689 aa	Known RBP	9.41	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	SSX6	Q7RTT6	188 aa		9.41	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	ELMOD2	Q8IZ81	293 aa		9.41	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	CFHR4	Q92496	578 aa		9.41	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	SLAMF9	Q96A28	289 aa		9.41	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	OR5M11	Q96RB7	305 aa		9.41	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	IL4I1	Q96RQ9	567 aa		9.41	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	RANBP3	Q9H6Z4	567 aa	Predicted RBP	9.41	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	ZNF702P	Q9H963	129 aa		9.41	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	ADGRL4	Q9HBW9	690 aa		9.41	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	H2AFY2	Q9P0M6	372 aa	Predicted RBP	9.41	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	MRM2	Q9UI43	246 aa	Known RBP	9.41	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114		V9GYS6	101 aa		9.41	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	PLXNB1	O43157	2135 aa		9.4	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	TCRBV3S1	A0A5B6	114 aa		9.4	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114		F8VVB4	439 aa		9.4	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114		F8VWA3	439 aa		9.4	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	DLGAP1	O14490	977 aa		9.4	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	GYG2	O15488	501 aa		9.4	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	NOS1AP	O75052	506 aa	Predicted RBP	9.4	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	DLX6	P56179	175 aa		9.4	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	EDDM3A	Q14507	147 aa		9.4	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	SSX2	Q16385	188 aa		9.4	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	AANAT	Q16613	207 aa		9.4	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	LDLRAD2	Q5SZI1	272 aa		9.4	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	SAMD5	Q5TGI4	173 aa		9.4	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	FAHD1	Q6P587	224 aa		9.4	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	CADM1	Q9BY67	442 aa	Known RBP	9.4	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	MOB1A	Q9H8S9	216 aa		9.4	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	HES4	Q9HCC6	221 aa		9.4	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	ABCB10	Q9NRK6	738 aa		9.4	□□□□□ -0.9
CDK5RAP3-223	ENST00000582114	C17orf98	A8MV24	154 aa		9.39	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114		K7N7A8	449 aa		9.39	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	FBXO24	O75426	580 aa		9.39	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	CALCB	P10092	127 aa		9.39	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	MPZ	P25189	248 aa		9.39	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	ACTR3	P61158	418 aa		9.39	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	ERVK11-1	P61568	191 aa		9.39	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	TMEM95	Q3KNT9	176 aa		9.39	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	OXLD1	Q5BKU9	147 aa		9.39	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	ARSJ	Q5FYB0	599 aa	Predicted RBP	9.39	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	AADACL4	Q5VUY2	407 aa		9.39	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	C11orf88	Q6PI97	169 aa		9.39	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	LIAT1	Q6ZQX7	453 aa		9.39	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114		Q6ZS46	218 aa		9.39	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	GDPD3	Q7L5L3	318 aa		9.39	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	TPRX1	Q8N7U7	411 aa		9.39	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	YIPF7	Q8N8F6	280 aa		9.39	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	OR13D1	Q8NGV5	346 aa		9.39	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	DNAJC9	Q8WXX5	260 aa		9.39	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	PRRG3	Q9BZD7	231 aa		9.39	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	CHST6	Q9GZX3	395 aa		9.39	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	MMP28	Q9H239	520 aa		9.39	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	PLEKHA1	Q9HB21	404 aa		9.39	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	KRT84	Q9NSB2	600 aa		9.39	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	SERTAD4	Q9NUC0	356 aa		9.39	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	CLN6	Q9NWW5	311 aa		9.39	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	MTCH1	Q9NZJ7	389 aa		9.39	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	IL36RN	Q9UBH0	155 aa		9.39	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	TCF19	Q9Y242	345 aa		9.39	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	POMP	Q9Y244	141 aa		9.39	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	HILPDA	Q9Y5L2	63 aa		9.39	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	SNX5	Q9Y5X3	404 aa		9.39	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	IGKV1-27	A0A075B6S5	117 aa		9.38	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114		A6NDX4	124 aa		9.38	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	FAM90A8P	A6NJQ4	464 aa		9.38	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	ODF3B	A8MYP8	253 aa		9.38	□□□□□ -0.91
CDK5RAP3-223	ENST00000582114	PEX14	O75381	377 aa		9.38	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms