RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 DUX4L9Q6RFH8 374 aaPredicted RBP10.45□□□□□ -0.74
SNORD55-201ENST00000581525 C1orf122Q6ZSJ8 110 aa10.45□□□□□ -0.74
SNORD55-201ENST00000581525 LHFPL2Q6ZUX7 228 aa10.45□□□□□ -0.74
SNORD55-201ENST00000581525 BTN2A1Q7KYR7 527 aa10.45□□□□□ -0.74
SNORD55-201ENST00000581525 NANOGP1Q8N7R0 232 aa10.45□□□□□ -0.74
SNORD55-201ENST00000581525 OR5T2Q8NGG2 359 aa10.45□□□□□ -0.74
SNORD55-201ENST00000581525 OR5D14Q8NGL3 314 aa10.45□□□□□ -0.74
SNORD55-201ENST00000581525 RGP1Q92546 391 aaPredicted RBP10.45□□□□□ -0.74
SNORD55-201ENST00000581525 BORCS8Q96FH0 119 aa10.45□□□□□ -0.74
SNORD55-201ENST00000581525 MRI1Q9BV20 369 aa10.45□□□□□ -0.74
SNORD55-201ENST00000581525 CDCA4Q9BXL8 241 aa10.45□□□□□ -0.74
SNORD55-201ENST00000581525 COMMD4Q9H0A8 199 aa10.45□□□□□ -0.74
SNORD55-201ENST00000581525 VCX3BQ9H321 246 aa10.45□□□□□ -0.74
SNORD55-201ENST00000581525 DUSP21Q9H596 190 aa10.45□□□□□ -0.74
SNORD55-201ENST00000581525 RHOFQ9HBH0 211 aa10.45□□□□□ -0.74
SNORD55-201ENST00000581525 DUX4Q9UBX2 424 aa10.45□□□□□ -0.74
SNORD55-201ENST00000581525 RPUSD1Q9UJJ7 312 aaKnown RBP10.45□□□□□ -0.74
SNORD55-201ENST00000581525 COL6A5A8TX70 2615 aa10.45□□□□□ -0.74
SNORD55-201ENST00000581525 TRBV5-5A0A0J9YX44 114 aa10.44□□□□□ -0.74
SNORD55-201ENST00000581525 ZNF879B4DU55 563 aa10.44□□□□□ -0.74
SNORD55-201ENST00000581525 H3BSH0 61 aa10.44□□□□□ -0.74
SNORD55-201ENST00000581525 NDUFB3O43676 98 aa10.44□□□□□ -0.74
SNORD55-201ENST00000581525 ATP6V1G2O95670 118 aa10.44□□□□□ -0.74
SNORD55-201ENST00000581525 KNG1P01042 644 aa10.44□□□□□ -0.74
SNORD55-201ENST00000581525 CDK1P06493 297 aa10.44□□□□□ -0.74
SNORD55-201ENST00000581525 AZGP1P25311 298 aaKnown RBP10.44□□□□□ -0.74
SNORD55-201ENST00000581525 HSPA13P48723 471 aa10.44□□□□□ -0.74
SNORD55-201ENST00000581525 ATP1B3P54709 279 aa10.44□□□□□ -0.74
SNORD55-201ENST00000581525 RPS11P62280 158 aaKnown RBP eCLIP10.44□□□□□ -0.74
SNORD55-201ENST00000581525 SLC35A2P78381 396 aa10.44□□□□□ -0.74
SNORD55-201ENST00000581525 IL13RA1P78552 427 aa10.44□□□□□ -0.74
SNORD55-201ENST00000581525 BDH1Q02338 343 aa10.44□□□□□ -0.74
SNORD55-201ENST00000581525 PDZK1IP1Q13113 114 aa10.44□□□□□ -0.74
SNORD55-201ENST00000581525 DGUOKQ16854 277 aa10.44□□□□□ -0.74
SNORD55-201ENST00000581525 ASPHD2Q6ICH7 369 aa10.44□□□□□ -0.74
SNORD55-201ENST00000581525 SAXO1Q8IYX7 474 aa10.44□□□□□ -0.74
SNORD55-201ENST00000581525 CD177Q8N6Q3 437 aa10.44□□□□□ -0.74
SNORD55-201ENST00000581525 PNLDC1Q8NA58 520 aaKnown RBP10.44□□□□□ -0.74
SNORD55-201ENST00000581525 BPIFB6Q8NFQ5 453 aa10.44□□□□□ -0.74
SNORD55-201ENST00000581525 OR13C3Q8NGS6 347 aa10.44□□□□□ -0.74
SNORD55-201ENST00000581525 GPR148Q8TDV2 347 aa10.44□□□□□ -0.74
SNORD55-201ENST00000581525 GATAD2BQ8WXI9 593 aa10.44□□□□□ -0.74
SNORD55-201ENST00000581525 SMIM19Q96E16 107 aa10.44□□□□□ -0.74
SNORD55-201ENST00000581525 PGLYRP3Q96LB9 341 aa10.44□□□□□ -0.74
SNORD55-201ENST00000581525 DCTN5Q9BTE1 182 aa10.44□□□□□ -0.74
SNORD55-201ENST00000581525 SIRPDQ9H106 197 aa10.44□□□□□ -0.74
SNORD55-201ENST00000581525 PRDM13Q9H4Q3 707 aa10.44□□□□□ -0.74
SNORD55-201ENST00000581525 ZCCHC4Q9H5U6 513 aa10.44□□□□□ -0.74
SNORD55-201ENST00000581525 CNTD2Q9H8S5 307 aa10.44□□□□□ -0.74
SNORD55-201ENST00000581525 SNTG1Q9NSN8 517 aa10.44□□□□□ -0.74
SNORD55-201ENST00000581525 CHCHD3Q9NX63 227 aaKnown RBP10.44□□□□□ -0.74
SNORD55-201ENST00000581525 DNAJB11Q9UBS4 358 aa10.44□□□□□ -0.74
SNORD55-201ENST00000581525 NUP50Q9UKX7 468 aa10.44□□□□□ -0.74
SNORD55-201ENST00000581525 ZNF281Q9Y2X9 895 aa10.44□□□□□ -0.74
SNORD55-201ENST00000581525 PCDHGB5Q9Y5G0 923 aa10.44□□□□□ -0.74
SNORD55-201ENST00000581525 KPTNQ9Y664 436 aa10.44□□□□□ -0.74
SNORD55-201ENST00000581525 FAM230AA0A1W2PPH8 454 aa10.43□□□□□ -0.74
SNORD55-201ENST00000581525 RFPL4AA6NLU0 287 aa10.43□□□□□ -0.74
SNORD55-201ENST00000581525 RFPL4AL1F8VTS6 287 aa10.43□□□□□ -0.74
SNORD55-201ENST00000581525 F8VVB4 439 aa10.43□□□□□ -0.74
SNORD55-201ENST00000581525 F8VWA3 439 aa10.43□□□□□ -0.74
SNORD55-201ENST00000581525 SLC1A7O00341 560 aa10.43□□□□□ -0.74
SNORD55-201ENST00000581525 ALDOBP05062 364 aa10.43□□□□□ -0.74
SNORD55-201ENST00000581525 ZNF20P17024 532 aa10.43□□□□□ -0.74
SNORD55-201ENST00000581525 EPHA1P21709 976 aa10.43□□□□□ -0.74
SNORD55-201ENST00000581525 PRDX2P32119 198 aa10.43□□□□□ -0.74
SNORD55-201ENST00000581525 TAS2R43P59537 309 aa10.43□□□□□ -0.74
SNORD55-201ENST00000581525 IRF3Q14653 427 aa10.43□□□□□ -0.74
SNORD55-201ENST00000581525 SMIM21Q3B7S5 101 aa10.43□□□□□ -0.74
SNORD55-201ENST00000581525 LRRC10Q5BKY1 277 aa10.43□□□□□ -0.74
SNORD55-201ENST00000581525 ASCL4Q6XD76 172 aa10.43□□□□□ -0.74
SNORD55-201ENST00000581525 MKXQ8IYA7 352 aa10.43□□□□□ -0.74
SNORD55-201ENST00000581525 Q8IYB0 196 aa10.43□□□□□ -0.74
SNORD55-201ENST00000581525 ZNF561Q8N587 486 aa10.43□□□□□ -0.74
SNORD55-201ENST00000581525 KIR3DL3Q8N743 410 aa10.43□□□□□ -0.74
SNORD55-201ENST00000581525 FAM216BQ8N7L0 139 aa10.43□□□□□ -0.74
SNORD55-201ENST00000581525 ZSCAN4Q8NAM6 433 aaPredicted RBP10.43□□□□□ -0.74
SNORD55-201ENST00000581525 Q8NFD4 153 aa10.43□□□□□ -0.74
SNORD55-201ENST00000581525 CEP19Q96LK0 163 aa10.43□□□□□ -0.74
SNORD55-201ENST00000581525 ZNF488Q96MN9 340 aa10.43□□□□□ -0.74
SNORD55-201ENST00000581525 OPALINQ96PE5 141 aa10.43□□□□□ -0.74
SNORD55-201ENST00000581525 MDFIQ99750 246 aa10.43□□□□□ -0.74
SNORD55-201ENST00000581525 UNKLQ9H9P5 680 aaKnown RBP10.43□□□□□ -0.74
SNORD55-201ENST00000581525 H0YHG0 523 aa10.42□□□□□ -0.74
SNORD55-201ENST00000581525 SULT1B1O43704 296 aa10.42□□□□□ -0.74
SNORD55-201ENST00000581525 NXPH2O95156 264 aa10.42□□□□□ -0.74
SNORD55-201ENST00000581525 MTCP1P56278 107 aa10.42□□□□□ -0.74
SNORD55-201ENST00000581525 WNT4P56705 351 aa10.42□□□□□ -0.74
SNORD55-201ENST00000581525 DOC2BQ14184 412 aa10.42□□□□□ -0.74
SNORD55-201ENST00000581525 ZNF146Q15072 292 aa10.42□□□□□ -0.74
SNORD55-201ENST00000581525 METAP1DQ6UB28 335 aaPredicted RBP10.42□□□□□ -0.74
SNORD55-201ENST00000581525 AHSA2Q719I0 299 aa10.42□□□□□ -0.74
SNORD55-201ENST00000581525 RNF144BQ7Z419 303 aa10.42□□□□□ -0.74
SNORD55-201ENST00000581525 FGFRL1Q8N441 504 aa10.42□□□□□ -0.74
SNORD55-201ENST00000581525 STX19Q8N4C7 294 aa10.42□□□□□ -0.74
SNORD55-201ENST00000581525 ZNRF1Q8ND25 227 aa10.42□□□□□ -0.74
SNORD55-201ENST00000581525 TRMT10AQ8TBZ6 339 aaKnown RBP10.42□□□□□ -0.74
SNORD55-201ENST00000581525 ZFAND2BQ8WV99 257 aa10.42□□□□□ -0.74
SNORD55-201ENST00000581525 GHSRQ92847 366 aa10.42□□□□□ -0.74
SNORD55-201ENST00000581525 WDFY2Q96P53 400 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms