RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 DNTTIP1Q9H147 329 aa8.75□□□□□ -1.01
CCDC47-203ENST00000580986 PCDHB16Q9NRJ7 776 aa8.75□□□□□ -1.01
CCDC47-203ENST00000580986 UFSP2Q9NUQ7 469 aa8.75□□□□□ -1.01
CCDC47-203ENST00000580986 C1orf123Q9NWV4 160 aa8.75□□□□□ -1.01
CCDC47-203ENST00000580986 POLQO75417 2590 aa8.75□□□□□ -1.01
CCDC47-203ENST00000580986 hCG_1807616A0A1W2PRN6 198 aa8.74□□□□□ -1.01
CCDC47-203ENST00000580986 IFITM5A6NNB3 132 aa8.74□□□□□ -1.01
CCDC47-203ENST00000580986 NOTOA8MTQ0 251 aa8.74□□□□□ -1.01
CCDC47-203ENST00000580986 VWC2LB2RUY7 222 aa8.74□□□□□ -1.01
CCDC47-203ENST00000580986 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.74□□□□□ -1.01
CCDC47-203ENST00000580986 AIPO00170 330 aa8.74□□□□□ -1.01
CCDC47-203ENST00000580986 NDUFA2O43678 99 aa8.74□□□□□ -1.01
CCDC47-203ENST00000580986 SLC25A16P16260 332 aa8.74□□□□□ -1.01
CCDC47-203ENST00000580986 COL8A2P25067 703 aa8.74□□□□□ -1.01
CCDC47-203ENST00000580986 BTG1P62324 171 aa8.74□□□□□ -1.01
CCDC47-203ENST00000580986 DYNC1I2Q13409 638 aaKnown RBP8.74□□□□□ -1.01
CCDC47-203ENST00000580986 SMIM21Q3B7S5 101 aa8.74□□□□□ -1.01
CCDC47-203ENST00000580986 TMEM155Q4W5P6 130 aa8.74□□□□□ -1.01
CCDC47-203ENST00000580986 DMRTC1Q5HYR2 192 aa8.74□□□□□ -1.01
CCDC47-203ENST00000580986 NHLRC3Q5JS37 347 aa8.74□□□□□ -1.01
CCDC47-203ENST00000580986 SLC25A26Q70HW3 274 aa8.74□□□□□ -1.01
CCDC47-203ENST00000580986 MUC20Q8N307 709 aaPredicted RBP8.74□□□□□ -1.01
CCDC47-203ENST00000580986 JAGN1Q8N5M9 183 aa8.74□□□□□ -1.01
CCDC47-203ENST00000580986 ZNF525Q8N782 197 aa8.74□□□□□ -1.01
CCDC47-203ENST00000580986 OR51F2Q8NH61 342 aa8.74□□□□□ -1.01
CCDC47-203ENST00000580986 C10orf105Q8TEF2 133 aa8.74□□□□□ -1.01
CCDC47-203ENST00000580986 LRRC29Q8WV35 223 aa8.74□□□□□ -1.01
CCDC47-203ENST00000580986 FAM168AQ92567 244 aa8.74□□□□□ -1.01
CCDC47-203ENST00000580986 RAB1CQ92928 201 aa8.74□□□□□ -1.01
CCDC47-203ENST00000580986 CEP19Q96LK0 163 aa8.74□□□□□ -1.01
CCDC47-203ENST00000580986 GFI1Q99684 422 aa8.74□□□□□ -1.01
CCDC47-203ENST00000580986 CNTD2Q9H8S5 307 aa8.74□□□□□ -1.01
CCDC47-203ENST00000580986 SMURF1Q9HCE7 757 aa8.74□□□□□ -1.01
CCDC47-203ENST00000580986 MTCH1Q9NZJ7 389 aa8.74□□□□□ -1.01
CCDC47-203ENST00000580986 FBLN5Q9UBX5 448 aa8.74□□□□□ -1.01
CCDC47-203ENST00000580986 ARID1AO14497 2285 aa8.74□□□□□ -1.01
CCDC47-203ENST00000580986 PPIAL4EA0A075B759 164 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 TRAV38-1A0A0B4J264 116 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 A0A0G2JK05 382 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 OOEPA6NGQ2 149 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 PPIAL4DF5H284 164 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 TRAPPC2LH3BP13 241 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 LGALS8O00214 317 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 SYNGR1O43759 233 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 SSX4O60224 188 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 CDC14BO60729 498 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 NOL3O60936 208 aaKnown RBP8.73□□□□□ -1.01
CCDC47-203ENST00000580986 RHBDL1O75783 438 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 LY6HO94772 140 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 BPNT1O95861 308 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 KNG1P01042 644 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 IGHV2-70P01814 119 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 PPIAL4FP0DN26 164 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 TMEM225BP0DP42 221 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 HTR2CP28335 458 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 SDC2P34741 201 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 MDH2P40926 338 aaKnown RBP8.73□□□□□ -1.01
CCDC47-203ENST00000580986 POU3F4P49335 361 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 ZNF146Q15072 292 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 DGUOKQ16854 277 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 TUSC1Q2TAM9 212 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 ZNF404Q494X3 552 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 SPIN3Q5JUX0 258 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 ATPAF1Q5TC12 328 aaPredicted RBP8.73□□□□□ -1.01
CCDC47-203ENST00000580986 FIP1L1Q6UN15 594 aaKnown RBP8.73□□□□□ -1.01
CCDC47-203ENST00000580986 ZNF826PQ6ZT77 177 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 USP43Q70EL4 1123 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 LINC00596Q86U02 117 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 LRRC28Q86X40 367 aaPredicted RBP8.73□□□□□ -1.01
CCDC47-203ENST00000580986 ANGPTL5Q86XS5 388 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 KRTAP1-3Q8IUG1 177 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 CLVS1Q8IUQ0 354 aaPredicted RBP8.73□□□□□ -1.01
CCDC47-203ENST00000580986 OR4D6Q8NGJ1 314 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 OR51T1Q8NGJ9 327 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 TNFAIP8L1Q8WVP5 186 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 SLC25A46Q96AG3 418 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 ISOC1Q96CN7 298 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 C1orf147Q96MC9 270 aaPredicted RBP8.73□□□□□ -1.01
CCDC47-203ENST00000580986 SPACA5Q96QH8 159 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 S100A13Q99584 98 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 PIMREGQ9BSJ6 248 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 KAAG1Q9UBP8 84 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 STEAP1Q9UHE8 339 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 MRPS28Q9Y2Q9 187 aaKnown RBP8.73□□□□□ -1.01
CCDC47-203ENST00000580986 AK6Q9Y3D8 172 aaKnown RBP8.73□□□□□ -1.01
CCDC47-203ENST00000580986 PPIAL4AQ9Y536 164 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 CACNG2Q9Y698 323 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 CEPT1Q9Y6K0 416 aa8.73□□□□□ -1.01
CCDC47-203ENST00000580986 PRRC2AP48634 2157 aaKnown RBP8.72□□□□□ -1.01
CCDC47-203ENST00000580986 IGKV1-12A0A0C4DH73 117 aa8.72□□□□□ -1.01
CCDC47-203ENST00000580986 H3BUI4 141 aa8.72□□□□□ -1.01
CCDC47-203ENST00000580986 CYB5R3P00387 301 aaPredicted RBP8.72□□□□□ -1.01
CCDC47-203ENST00000580986 IGKV1D-12P01611 117 aa8.72□□□□□ -1.01
CCDC47-203ENST00000580986 GLRA1P23415 457 aa8.72□□□□□ -1.01
CCDC47-203ENST00000580986 NR4A2P43354 598 aa8.72□□□□□ -1.01
CCDC47-203ENST00000580986 GPR6P46095 362 aaPredicted RBP8.72□□□□□ -1.01
CCDC47-203ENST00000580986 OR3A4PP47883 348 aa8.72□□□□□ -1.01
CCDC47-203ENST00000580986 FGF12P61328 243 aa8.72□□□□□ -1.01
CCDC47-203ENST00000580986 NCS1P62166 190 aa8.72□□□□□ -1.01
CCDC47-203ENST00000580986 IL13RA2Q14627 380 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms