RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	IL6	P05231	212 aa		4.58	□□□□□ -1.68
KPNB1-209	ENST00000580158	PIP	P12273	146 aa	Predicted RBP	4.58	□□□□□ -1.68
KPNB1-209	ENST00000580158	ZNF823	P16415	610 aa		4.58	□□□□□ -1.68
KPNB1-209	ENST00000580158	LBP	P18428	481 aa		4.58	□□□□□ -1.68
KPNB1-209	ENST00000580158	VDAC1	P21796	283 aa		4.58	□□□□□ -1.68
KPNB1-209	ENST00000580158	RBM34	P42696	430 aa	Known RBP	4.58	□□□□□ -1.68
KPNB1-209	ENST00000580158	DLX6	P56179	175 aa		4.58	□□□□□ -1.68
KPNB1-209	ENST00000580158	NME5	P56597	212 aa		4.58	□□□□□ -1.68
KPNB1-209	ENST00000580158	UFM1	P61960	85 aa		4.58	□□□□□ -1.68
KPNB1-209	ENST00000580158	HES1	Q14469	280 aa		4.58	□□□□□ -1.68
KPNB1-209	ENST00000580158	RFX4	Q33E94	735 aa		4.58	□□□□□ -1.68
KPNB1-209	ENST00000580158	SNAI3	Q3KNW1	292 aa		4.58	□□□□□ -1.68
KPNB1-209	ENST00000580158	KRTAP27-1	Q3LI81	207 aa		4.58	□□□□□ -1.68
KPNB1-209	ENST00000580158	GLYATL3	Q5SZD4	288 aa		4.58	□□□□□ -1.68
KPNB1-209	ENST00000580158	ASPHD1	Q5U4P2	390 aa		4.58	□□□□□ -1.68
KPNB1-209	ENST00000580158	AGBL2	Q5U5Z8	902 aa		4.58	□□□□□ -1.68
KPNB1-209	ENST00000580158	CORO6	Q6QEF8	472 aa		4.58	□□□□□ -1.68
KPNB1-209	ENST00000580158	ZNF575	Q86XF7	245 aa		4.58	□□□□□ -1.68
KPNB1-209	ENST00000580158	FTMT	Q8N4E7	242 aa		4.58	□□□□□ -1.68
KPNB1-209	ENST00000580158	C5orf56	Q8N8D9	126 aa		4.58	□□□□□ -1.68
KPNB1-209	ENST00000580158	SPATA4	Q8NEY3	305 aa		4.58	□□□□□ -1.68
KPNB1-209	ENST00000580158	OR6T1	Q8NGN1	323 aa		4.58	□□□□□ -1.68
KPNB1-209	ENST00000580158	PFN4	Q8NHR9	129 aa		4.58	□□□□□ -1.68
KPNB1-209	ENST00000580158	ZNF671	Q8TAW3	534 aa		4.58	□□□□□ -1.68
KPNB1-209	ENST00000580158	ARPC1A	Q92747	370 aa		4.58	□□□□□ -1.68
KPNB1-209	ENST00000580158	SNX22	Q96L94	193 aa		4.58	□□□□□ -1.68
KPNB1-209	ENST00000580158	ZNF714	Q96N38	554 aa		4.58	□□□□□ -1.68
KPNB1-209	ENST00000580158	CENPO	Q9BU64	300 aa		4.58	□□□□□ -1.68
KPNB1-209	ENST00000580158	PAIP1	Q9H074	479 aa	Known RBP	4.58	□□□□□ -1.68
KPNB1-209	ENST00000580158	PYCARD	Q9ULZ3	195 aa		4.58	□□□□□ -1.68
KPNB1-209	ENST00000580158	STUB1	Q9UNE7	303 aa		4.58	□□□□□ -1.68
KPNB1-209	ENST00000580158	VSIG4	Q9Y279	399 aa		4.58	□□□□□ -1.68
KPNB1-209	ENST00000580158	MED31	Q9Y3C7	131 aa		4.58	□□□□□ -1.68
KPNB1-209	ENST00000580158	HERC1	Q15751	4861 aa		4.58	□□□□□ -1.68
KPNB1-209	ENST00000580158	PRSS37	A4D1T9	235 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	RFPL4A	A6NLU0	287 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	RFPL4AL1	F8VTS6	287 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	LINC01619	G3V211	115 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158		I3L521	148 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	XRCC2	O43543	280 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	NDUFB8	O95169	186 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	LYPD3	O95274	346 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	TNFRSF6B	O95407	300 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	IGLV1-51	P01701	117 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	IGHG4	P01861	327 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	TK1	P04183	234 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	ANXA2	P07355	339 aa	Known RBP	4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	TMEM11	P17152	192 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	GCA	P28676	217 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	ALDH3A1	P30838	453 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	EDDM3B	P56851	147 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	ESRRG	P62508	458 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	RUNX1	Q01196	453 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	SCARB2	Q14108	478 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	ANKDD1A	Q495B1	522 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	C6orf10	Q5SRN2	563 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	LRIF1	Q5T3J3	769 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	GCNT6	Q5T4J0	391 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	OR52W1	Q6IF63	320 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	SMARCD3	Q6STE5	483 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	CCDC80	Q76M96	950 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	RTN4RL2	Q86UN3	420 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	OR6V1	Q8N148	313 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	SMYD1	Q8NB12	490 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	OR5AN1	Q8NGI8	311 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	OR4P4	Q8NGL7	312 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	TRMT10A	Q8TBZ6	339 aa	Known RBP	4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	TMEM255B	Q8WV15	326 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	PHLDA1	Q8WV24	401 aa	Predicted RBP	4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	TMEM239	Q8WW34	195 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	RGP1	Q92546	391 aa	Predicted RBP	4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	VPS33A	Q96AX1	596 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	ZNF503	Q96F45	646 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	PRSS27	Q9BQR3	290 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	CHCHD6	Q9BRQ6	235 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	C1orf43	Q9BWL3	253 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	PAPOLG	Q9BWT3	736 aa	Known RBP	4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	TINAGL1	Q9GZM7	467 aa	Predicted RBP	4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	NDEL1	Q9GZM8	345 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	TMEM133	Q9H2Q1	129 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	SP140L	Q9H930	580 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	ABCB9	Q9NP78	766 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	ZDHHC18	Q9NUE0	388 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	ING3	Q9NXR8	418 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	RASL12	Q9NYN1	266 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	ZNF222	Q9UK12	451 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	N6AMT1	Q9Y5N5	214 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	LHFPL6	Q9Y693	200 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	SESN1	Q9Y6P5	492 aa		4.57	□□□□□ -1.68
KPNB1-209	ENST00000580158	HTR3E	A5X5Y0	456 aa		4.56	□□□□□ -1.68
KPNB1-209	ENST00000580158	ARRDC5	A6NEK1	342 aa		4.56	□□□□□ -1.68
KPNB1-209	ENST00000580158	OOSP1	A8MZH6	123 aa		4.56	□□□□□ -1.68
KPNB1-209	ENST00000580158	TOR1A	O14656	332 aa		4.56	□□□□□ -1.68
KPNB1-209	ENST00000580158	ZSCAN12	O43309	604 aa		4.56	□□□□□ -1.68
KPNB1-209	ENST00000580158	OR5H8	P0DN80	308 aa		4.56	□□□□□ -1.68
KPNB1-209	ENST00000580158	PSMB8	P28062	276 aa		4.56	□□□□□ -1.68
KPNB1-209	ENST00000580158	IL12A	P29459	219 aa		4.56	□□□□□ -1.68
KPNB1-209	ENST00000580158	CRABP1	P29762	137 aa		4.56	□□□□□ -1.68
KPNB1-209	ENST00000580158	AQP1	P29972	269 aa		4.56	□□□□□ -1.68

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