RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 ST3GAL4Q11206 333 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 IL24Q13007 206 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 PDCD1Q15116 288 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 KRTAP24-1Q3LI83 254 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 ATPAF1Q5TC12 328 aaPredicted RBP5.43□□□□□ -1.54
TRAF4-213ENST00000578917 OGFRL1Q5TC84 451 aaPredicted RBP5.43□□□□□ -1.54
TRAF4-213ENST00000578917 TMEM42Q69YG0 159 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 STUMQ69YW2 141 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 FDX2Q6P4F2 183 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 RPL22L1Q6P5R6 122 aaKnown RBP5.43□□□□□ -1.54
TRAF4-213ENST00000578917 DUX4L9Q6RFH8 374 aaPredicted RBP5.43□□□□□ -1.54
TRAF4-213ENST00000578917 BRD3OSQ6XYD6 125 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 ACP7Q6ZNF0 438 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 USP43Q70EL4 1123 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 KRT74Q7RTS7 529 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 SATL1Q86VE3 508 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 CALHM1Q8IU99 346 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 SERPINA12Q8IW75 414 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 FAM185AQ8N0U4 392 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 STX19Q8N4C7 294 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 ASCC1Q8N9N2 400 aaKnown RBP5.43□□□□□ -1.54
TRAF4-213ENST00000578917 BPIFB6Q8NFQ5 453 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 OR13C9Q8NGT0 318 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 ANGPTL6Q8NI99 470 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 TBC1D15Q8TC07 691 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 APH1BQ8WW43 257 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 GATAD2BQ8WXI9 593 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 LHX4Q969G2 390 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 SLAMF9Q96A28 289 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 SLC25A28Q96A46 364 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 UPRTQ96BW1 309 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 ADAT3Q96EY9 351 aaPredicted RBP5.43□□□□□ -1.54
TRAF4-213ENST00000578917 CEP19Q96LK0 163 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 WDFY2Q96P53 400 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 PKIBQ9C010 78 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 CHST5Q9GZS9 411 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 FGF23Q9GZV9 251 aaPredicted RBP5.43□□□□□ -1.54
TRAF4-213ENST00000578917 ELL3Q9HB65 397 aaPredicted RBP5.43□□□□□ -1.54
TRAF4-213ENST00000578917 FGF20Q9NP95 211 aaPredicted RBP5.43□□□□□ -1.54
TRAF4-213ENST00000578917 TNFRSF19Q9NS68 423 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 MRPS18AQ9NVS2 196 aaKnown RBP5.43□□□□□ -1.54
TRAF4-213ENST00000578917 BABAM2Q9NXR7 383 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 DUX4Q9UBX2 424 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 RPUSD1Q9UJJ7 312 aaKnown RBP5.43□□□□□ -1.54
TRAF4-213ENST00000578917 CAB39Q9Y376 341 aaPredicted RBP5.43□□□□□ -1.54
TRAF4-213ENST00000578917 EXOSC1Q9Y3B2 195 aaKnown RBP5.43□□□□□ -1.54
TRAF4-213ENST00000578917 PCDHGB5Q9Y5G0 923 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 HSPE1-MOB4S4R3N1 261 aa5.43□□□□□ -1.54
TRAF4-213ENST00000578917 IGKV1D-17A0A075B6S4 117 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 PTGES3LE9PB15 166 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 E9PI62 339 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 E9PQ18 207 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 SH2D1BO14796 132 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 NOS1APO75052 506 aaPredicted RBP5.42□□□□□ -1.54
TRAF4-213ENST00000578917 ZFPL1O95159 310 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 CRYBA1P05813 215 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 CHRM2P08172 466 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 GNAO1P09471 354 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 LIMS3P0CW19 117 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 LIMS4P0CW20 117 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 PGA5P0DJD9 388 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 CALCBP10092 127 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 SELLP14151 372 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 RAB3AP20336 220 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 GABRR1P24046 479 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 AZGP1P25311 298 aaKnown RBP5.42□□□□□ -1.54
TRAF4-213ENST00000578917 SOX2P48431 317 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 GTF2A1P52655 376 aaPredicted RBP5.42□□□□□ -1.54
TRAF4-213ENST00000578917 SNU13P55769 128 aaKnown RBP5.42□□□□□ -1.54
TRAF4-213ENST00000578917 HILS1P60008 231 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 RPL31P62899 125 aaKnown RBP5.42□□□□□ -1.54
TRAF4-213ENST00000578917 SCN1BQ07699 218 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 DGUOKQ16854 277 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 CCDC58Q4VC31 144 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 KLF17Q5JT82 389 aaPredicted RBP5.42□□□□□ -1.54
TRAF4-213ENST00000578917 OR2G6Q5TZ20 316 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 ZNF788Q6ZQV5 615 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 LHFPL2Q6ZUX7 228 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 UTS2BQ765I0 119 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 GDPD3Q7L5L3 318 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 PHC2Q8IXK0 858 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 Q8IYB0 196 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 BCL6BQ8N143 479 aaPredicted RBP5.42□□□□□ -1.54
TRAF4-213ENST00000578917 FGFRL1Q8N441 504 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 ZNF561Q8N587 486 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 CD177Q8N6Q3 437 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 DNAAF1Q8NEP3 725 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 OR4M1Q8NGD0 313 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 OR51A4Q8NGJ6 313 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 OR10AC1Q8NH08 325 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 GPR148Q8TDV2 347 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 EMG1Q92979 244 aaKnown RBP5.42□□□□□ -1.54
TRAF4-213ENST00000578917 MYDGFQ969H8 173 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 RFT1Q96AA3 541 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 SPSB1Q96BD6 273 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 CPNE2Q96FN4 548 aaPredicted RBP5.42□□□□□ -1.54
TRAF4-213ENST00000578917 OPALINQ96PE5 141 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 GAFA1Q96PS6 74 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 DUX5Q96PT3 197 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 SPACA5Q96QH8 159 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms