RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 CLDN25C9JDP6 229 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 TSTD3H0UI37 97 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 H3BNH8 94 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 GFYI3L273 518 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 M0R143 59 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 CCL25O15444 150 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 MBTPS2O43462 519 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 RAD51CO43502 376 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 CDC40O60508 579 aaKnown RBP eCLIP2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 RAD1O60671 282 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 UTS2O95399 124 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 CNIH1O95406 144 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 SLC25A27O95847 323 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 MT-CO2P00403 227 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 PDYNP01213 254 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 JCHAINP01591 159 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 IGHV2-5P01817 119 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 CD74P04233 296 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 BPGMP07738 259 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 OR10J4P0C629 311 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 OR8U8P0C7N1 319 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 PET100P0DJ07 73 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 PPIAL4GP0DN37 164 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 SPNP16150 400 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 IL1RNP18510 177 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 GABRR2P28476 465 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 CTRLP40313 264 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 GCLMP48507 274 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 RORCP51449 518 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 TAS2R41P59536 307 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 CKS1BP61024 79 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 HERVK_113P61574 105 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 GNG11P61952 73 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 MXD1Q05195 221 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 PJVKQ0ZLH3 352 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 MLLT11Q13015 90 aaPredicted RBP2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 CARTPTQ16568 116 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 GUCA2BQ16661 112 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 PLPPR5Q32ZL2 321 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 KRTAP21-2Q3LI59 83 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 TMEM176BQ3YBM2 270 aaPredicted RBP2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 CCSMST1Q4G0I0 132 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 PTPN20Q4JDL3 420 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 ANKRD22Q5VYY1 191 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 LAMTOR1Q6IAA8 161 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 OR2A2Q6IF42 318 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 CASP12Q6UXS9 341 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 IZUMO2Q6UXV1 221 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 LINC01551Q86U37 167 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 NAA40Q86UY6 237 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 LRRC28Q86X40 367 aaPredicted RBP2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 OR6V1Q8N148 313 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 MTURNQ8N3F0 131 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 STPG2Q8N412 459 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 GDPD1Q8N9F7 314 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 C8orf31Q8N9H6 132 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 SLC26A10Q8NG04 563 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 OR5L1Q8NGL2 311 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 OR4P4Q8NGL7 312 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 OR8U1Q8NH10 309 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 OR4A16Q8NH70 328 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 RNASEH2CQ8TDP1 164 aaKnown RBP2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 PHF10Q8WUB8 498 aaKnown RBP2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 TFGQ92734 400 aaPredicted RBP2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 FCRL1Q96LA6 429 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 HSFY1Q96LI6 401 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 C12orf42Q96LP6 360 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 VSTM2LQ96N03 204 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 GPR137Q96N19 417 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 OR52B2Q96RD2 323 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 ARHGDIGQ99819 225 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 C1orf50Q9BV19 199 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 SUCNR1Q9BXA5 334 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 OSBPL11Q9BXB4 747 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 NMNAT2Q9BZQ4 307 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 ANKHQ9HCJ1 492 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 MMP26Q9NRE1 261 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 RASL12Q9NYN1 266 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 SS18L2Q9UHA2 77 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 ZNF391Q9UJN7 358 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 ANGPT4Q9Y264 503 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 UFC1Q9Y3C8 167 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 RBM7Q9Y580 266 aaKnown RBP2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 RFNGQ9Y644 331 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 NPHP4O75161 1426 aaPredicted RBP2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 NOS1P29475 1434 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 FGD6Q6ZV73 1430 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 CEP152O94986 1710 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 FLT4P35916 1363 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 ABCC12Q96J65 1359 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 ARHGEF11O15085 1522 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 SLIT3O75094 1523 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 MAP3K1Q13233 1512 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 FANCAO15360 1455 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 POLA1P09884 1462 aaPredicted RBP2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 DAPK1P53355 1430 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 A0A096LPI6 279 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 PRORSD1PA6NEY8 169 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 SMIM9A6NGZ8 99 aa2.46□□□□□ -2.02
SMCHD1-202ENST00000577300 GJE1A6NN92 205 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms