RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 SHISA8B8ZZ34 492 aa11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 ACTL6BO94805 426 aa11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 RPS15P62841 145 aaKnown RBP11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 HIST1H3AP68431 136 aa11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 MYBPHQ13203 477 aa11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 SLC26A10Q8NG04 563 aa11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 OR10A7Q8NGE5 316 aa11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 EXTL1Q92935 676 aa11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 PITPNC1Q9UKF7 332 aa11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 OR8U8P0C7N1 319 aa11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 ERGP11308 486 aa11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 CSNK1EP49674 416 aaKnown RBP11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 THBS3P49746 956 aa11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 LIAT1Q6ZQX7 453 aa11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 FGF14Q92915 247 aa11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 MRGPRX1Q96LB2 322 aa11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 ANKRD31Q8N7Z5 1873 aa11.64□□□□□ -0.55
PCDHGB3-201ENST00000576222 LINC00587B1AMM8 73 aa11.63□□□□□ -0.55
PCDHGB3-201ENST00000576222 TMEM52Q8NDY8 209 aa11.63□□□□□ -0.55
PCDHGB3-201ENST00000576222 RAB9BQ9NP90 201 aa11.63□□□□□ -0.55
PCDHGB3-201ENST00000576222 GSN-AS1Q9NRJ2 163 aa11.63□□□□□ -0.55
PCDHGB3-201ENST00000576222 LIN7CQ9NUP9 197 aaKnown RBP11.63□□□□□ -0.55
PCDHGB3-201ENST00000576222 UBE2L5PA0A1B0GUS4 154 aa11.63□□□□□ -0.55
PCDHGB3-201ENST00000576222 IGHV3-9P01782 118 aa11.63□□□□□ -0.55
PCDHGB3-201ENST00000576222 MMP16P51512 607 aa11.63□□□□□ -0.55
PCDHGB3-201ENST00000576222 FUT6P51993 359 aa11.63□□□□□ -0.55
PCDHGB3-201ENST00000576222 TMEM267Q0VDI3 215 aaPredicted RBP11.63□□□□□ -0.55
PCDHGB3-201ENST00000576222 ZNF260Q3ZCT1 412 aa11.63□□□□□ -0.55
PCDHGB3-201ENST00000576222 DHRS11Q6UWP2 260 aa11.63□□□□□ -0.55
PCDHGB3-201ENST00000576222 SYT13Q7L8C5 426 aa11.63□□□□□ -0.55
PCDHGB3-201ENST00000576222 HOGA1Q86XE5 327 aa11.63□□□□□ -0.55
PCDHGB3-201ENST00000576222 OR8B12Q8NGG6 310 aa11.63□□□□□ -0.55
PCDHGB3-201ENST00000576222 OR1N1Q8NGS0 311 aa11.63□□□□□ -0.55
PCDHGB3-201ENST00000576222 RAB40CQ96S21 281 aa11.63□□□□□ -0.55
PCDHGB3-201ENST00000576222 YBX2Q9Y2T7 364 aaKnown RBP11.63□□□□□ -0.55
PCDHGB3-201ENST00000576222 CARHSP1Q9Y2V2 147 aaKnown RBP11.63□□□□□ -0.55
PCDHGB3-201ENST00000576222 HDGFL3Q9Y3E1 203 aa11.63□□□□□ -0.55
PCDHGB3-201ENST00000576222 GEMIN2O14893 280 aaKnown RBP11.63□□□□□ -0.55
PCDHGB3-201ENST00000576222 CTGFP29279 349 aa11.63□□□□□ -0.55
PCDHGB3-201ENST00000576222 ERVS71-1P61550 626 aa11.63□□□□□ -0.55
PCDHGB3-201ENST00000576222 FUT7Q11130 342 aa11.63□□□□□ -0.55
PCDHGB3-201ENST00000576222 ROBO4Q8WZ75 1007 aa11.63□□□□□ -0.55
PCDHGB3-201ENST00000576222 SMDT1Q9H4I9 107 aa11.63□□□□□ -0.55
PCDHGB3-201ENST00000576222 FAM60AQ9NP50 221 aa11.63□□□□□ -0.55
PCDHGB3-201ENST00000576222 GPR132Q9UNW8 380 aa11.63□□□□□ -0.55
PCDHGB3-201ENST00000576222 DMRT1Q9Y5R6 373 aa11.63□□□□□ -0.55
PCDHGB3-201ENST00000576222 UBE2G2P60604 165 aa11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 TGFBR3Q03167 851 aa11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 BSXQ3C1V8 233 aa11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 LYZL2Q7Z4W2 148 aa11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 C22orf15Q8WYQ4 148 aa11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 ADGRG7Q96K78 797 aa11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 AMELYQ99218 206 aa11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 RIMS4Q9H426 269 aaPredicted RBP11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 APOA2P02652 100 aa11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 THY1P04216 161 aa11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 MMP7P09237 267 aaPredicted RBP11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 DYNLT3P51808 116 aa11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 RRADP55042 308 aa11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 FGF8P55075 233 aaPredicted RBP11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 VAMP3Q15836 100 aa11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 KLHDC1Q8N7A1 406 aa11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 ADAT3Q96EY9 351 aaPredicted RBP11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 AQP10Q96PS8 301 aa11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 METTL1Q9UBP6 276 aaKnown RBP11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 GREM1O60565 184 aa11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 ZNF737O75373 536 aa11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 CT45A8P0DMV1 189 aa11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 CT45A9P0DMV2 189 aa11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 FSTP19883 344 aa11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 GCH1P30793 250 aa11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 HAAOP46952 286 aa11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 IL24Q13007 206 aa11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 SRSF5Q13243 272 aaKnown RBP11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 CT45A2Q5DJT8 189 aa11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 VAX1Q5SQQ9 334 aa11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 OIT3Q8WWZ8 545 aa11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 KCNE5Q9UJ90 142 aa11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 LHX6Q9UPM6 363 aa11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 C1QL1O75973 258 aa11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 EDN3P14138 238 aa11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 ZNF25P17030 456 aaPredicted RBP11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 DTYMKP23919 212 aa11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 PEBP1P30086 187 aaKnown RBP11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 ARL3P36405 182 aa11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 EWSR1Q01844 656 aaKnown RBP eCLIP11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 ZNF92Q03936 586 aa11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 SKP2Q13309 424 aa11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 ADAMTS17Q8TE56 1095 aa11.62□□□□□ -0.55
PCDHGB3-201ENST00000576222 RBBP6Q7Z6E9 1792 aaKnown RBP11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 EN2P19622 333 aaPredicted RBP11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 ERGIC1Q969X5 290 aa11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 FAM234AQ9H0X4 552 aa11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 CALHM2Q9HA72 323 aa11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 COL11A2P13942 1736 aaPredicted RBP11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 IGHV3-15A0A0B4J1V0 119 aa11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 A0A1W2PNV4 684 aa11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 IGKV1D-16P01601 117 aa11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 NGFRP08138 427 aa11.61□□□□□ -0.55
PCDHGB3-201ENST00000576222 FAM157BP0CG42 384 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms