RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 C18orf12Q96KH6 178 aa11.71□□□□□ -0.53
RPAIN-217ENST00000575711 ZNF488Q96MN9 340 aa11.71□□□□□ -0.53
RPAIN-217ENST00000575711 NRIP2Q9BQI9 281 aa11.71□□□□□ -0.53
RPAIN-217ENST00000575711 WDR13Q9H1Z4 485 aa11.71□□□□□ -0.53
RPAIN-217ENST00000575711 PPIL3Q9H2H8 161 aaKnown RBP11.71□□□□□ -0.53
RPAIN-217ENST00000575711 SMURF1Q9HCE7 757 aa11.71□□□□□ -0.53
RPAIN-217ENST00000575711 SNTG1Q9NSN8 517 aa11.71□□□□□ -0.53
RPAIN-217ENST00000575711 MTCH1Q9NZJ7 389 aa11.71□□□□□ -0.53
RPAIN-217ENST00000575711 NLKQ9UBE8 527 aa11.71□□□□□ -0.53
RPAIN-217ENST00000575711 SSR3Q9UNL2 185 aa11.71□□□□□ -0.53
RPAIN-217ENST00000575711 VPS13CQ709C8 3753 aa11.71□□□□□ -0.53
RPAIN-217ENST00000575711 CEACAM18A8MTB9 384 aa11.7□□□□□ -0.54
RPAIN-217ENST00000575711 NDUFA2O43678 99 aa11.7□□□□□ -0.54
RPAIN-217ENST00000575711 ANGPTL7O43827 346 aa11.7□□□□□ -0.54
RPAIN-217ENST00000575711 IGHV2-5P01817 119 aa11.7□□□□□ -0.54
RPAIN-217ENST00000575711 GYPAP02724 150 aa11.7□□□□□ -0.54
RPAIN-217ENST00000575711 RPS2P15880 293 aaKnown RBP11.7□□□□□ -0.54
RPAIN-217ENST00000575711 MYL9P24844 172 aa11.7□□□□□ -0.54
RPAIN-217ENST00000575711 TIMM50Q3ZCQ8 353 aa11.7□□□□□ -0.54
RPAIN-217ENST00000575711 GLT8D1Q68CQ7 371 aa11.7□□□□□ -0.54
RPAIN-217ENST00000575711 C22orf42Q6IC83 251 aa11.7□□□□□ -0.54
RPAIN-217ENST00000575711 CRIP3Q6Q6R5 217 aa11.7□□□□□ -0.54
RPAIN-217ENST00000575711 ACP7Q6ZNF0 438 aa11.7□□□□□ -0.54
RPAIN-217ENST00000575711 LRRTM1Q86UE6 522 aa11.7□□□□□ -0.54
RPAIN-217ENST00000575711 FAM90A1Q86YD7 464 aa11.7□□□□□ -0.54
RPAIN-217ENST00000575711 BATF2Q8N1L9 274 aa11.7□□□□□ -0.54
RPAIN-217ENST00000575711 SEH1LQ96EE3 360 aa11.7□□□□□ -0.54
RPAIN-217ENST00000575711 TMUB1Q9BVT8 246 aa11.7□□□□□ -0.54
RPAIN-217ENST00000575711 OR51E2Q9H255 320 aa11.7□□□□□ -0.54
RPAIN-217ENST00000575711 ZNF665Q9H7R5 613 aa11.7□□□□□ -0.54
RPAIN-217ENST00000575711 PATZ1Q9HBE1 687 aaKnown RBP11.7□□□□□ -0.54
RPAIN-217ENST00000575711 MIOXQ9UGB7 285 aa11.7□□□□□ -0.54
RPAIN-217ENST00000575711 GSTK1Q9Y2Q3 226 aa11.7□□□□□ -0.54
RPAIN-217ENST00000575711 MYO9AB2RTY4 2548 aa11.7□□□□□ -0.54
RPAIN-217ENST00000575711 OTOGQ6ZRI0 2925 aa11.7□□□□□ -0.54
RPAIN-217ENST00000575711 NKX6-3A6NJ46 265 aa11.69□□□□□ -0.54
RPAIN-217ENST00000575711 OR2AT4A6NND4 320 aa11.69□□□□□ -0.54
RPAIN-217ENST00000575711 KDM4BO94953 1096 aa11.69□□□□□ -0.54
RPAIN-217ENST00000575711 INHBBP09529 407 aa11.69□□□□□ -0.54
RPAIN-217ENST00000575711 FOSL1P15407 271 aa11.69□□□□□ -0.54
RPAIN-217ENST00000575711 ADRA2CP18825 462 aa11.69□□□□□ -0.54
RPAIN-217ENST00000575711 BCL3P20749 454 aa11.69□□□□□ -0.54
RPAIN-217ENST00000575711 CPT2P23786 658 aa11.69□□□□□ -0.54
RPAIN-217ENST00000575711 GADD45AP24522 165 aa11.69□□□□□ -0.54
RPAIN-217ENST00000575711 FGF9P31371 208 aaPredicted RBP11.69□□□□□ -0.54
RPAIN-217ENST00000575711 IL2RGP31785 369 aa11.69□□□□□ -0.54
RPAIN-217ENST00000575711 PTGFRP43088 359 aa11.69□□□□□ -0.54
RPAIN-217ENST00000575711 OR3A4PP47883 348 aa11.69□□□□□ -0.54
RPAIN-217ENST00000575711 ERVK11-1P61568 191 aa11.69□□□□□ -0.54
RPAIN-217ENST00000575711 LMO4P61968 165 aa11.69□□□□□ -0.54
RPAIN-217ENST00000575711 TMEM249Q2WGJ8 235 aa11.69□□□□□ -0.54
RPAIN-217ENST00000575711 STUMQ69YW2 141 aa11.69□□□□□ -0.54
RPAIN-217ENST00000575711 FIP1L1Q6UN15 594 aaKnown RBP11.69□□□□□ -0.54
RPAIN-217ENST00000575711 NLRC3Q7RTR2 1065 aa11.69□□□□□ -0.54
RPAIN-217ENST00000575711 PXT1Q8NFP0 134 aa11.69□□□□□ -0.54
RPAIN-217ENST00000575711 OR8B3Q8NGG8 313 aa11.69□□□□□ -0.54
RPAIN-217ENST00000575711 EMG1Q92979 244 aaKnown RBP11.69□□□□□ -0.54
RPAIN-217ENST00000575711 FOXRED1Q96CU9 486 aaPredicted RBP11.69□□□□□ -0.54
RPAIN-217ENST00000575711 YIPF6Q96EC8 236 aa11.69□□□□□ -0.54
RPAIN-217ENST00000575711 OR8B2Q96RD0 313 aa11.69□□□□□ -0.54
RPAIN-217ENST00000575711 S100A13Q99584 98 aa11.69□□□□□ -0.54
RPAIN-217ENST00000575711 NKX3-1Q99801 234 aaPredicted RBP11.69□□□□□ -0.54
RPAIN-217ENST00000575711 CHCHD6Q9BRQ6 235 aa11.69□□□□□ -0.54
RPAIN-217ENST00000575711 UQCC2Q9BRT2 126 aa11.69□□□□□ -0.54
RPAIN-217ENST00000575711 ELL3Q9HB65 397 aaPredicted RBP11.69□□□□□ -0.54
RPAIN-217ENST00000575711 RHOFQ9HBH0 211 aa11.69□□□□□ -0.54
RPAIN-217ENST00000575711 HES4Q9HCC6 221 aa11.69□□□□□ -0.54
RPAIN-217ENST00000575711 TXNL4BQ9NX01 149 aaKnown RBP11.69□□□□□ -0.54
RPAIN-217ENST00000575711 TEX15Q9BXT5 2789 aa11.69□□□□□ -0.54
RPAIN-217ENST00000575711 TRAV1-2A0A0B4J238 106 aa11.68□□□□□ -0.54
RPAIN-217ENST00000575711 IGKV1-12A0A0C4DH73 117 aa11.68□□□□□ -0.54
RPAIN-217ENST00000575711 LOC100506127A0A0U1RQW1 187 aa11.68□□□□□ -0.54
RPAIN-217ENST00000575711 ADAM20O43506 726 aa11.68□□□□□ -0.54
RPAIN-217ENST00000575711 KNG1P01042 644 aa11.68□□□□□ -0.54
RPAIN-217ENST00000575711 IGKV1D-12P01611 117 aa11.68□□□□□ -0.54
RPAIN-217ENST00000575711 NPBWR2P48146 333 aa11.68□□□□□ -0.54
RPAIN-217ENST00000575711 GZMKP49863 264 aa11.68□□□□□ -0.54
RPAIN-217ENST00000575711 SLC36A1Q7Z2H8 476 aa11.68□□□□□ -0.54
RPAIN-217ENST00000575711 FAM58AQ8N1B3 248 aa11.68□□□□□ -0.54
RPAIN-217ENST00000575711 OR5T2Q8NGG2 359 aa11.68□□□□□ -0.54
RPAIN-217ENST00000575711 NEIL1Q96FI4 390 aaPredicted RBP11.68□□□□□ -0.54
RPAIN-217ENST00000575711 DNTTIP1Q9H147 329 aa11.68□□□□□ -0.54
RPAIN-217ENST00000575711 METTL9Q9H1A3 318 aa11.68□□□□□ -0.54
RPAIN-217ENST00000575711 CNTD2Q9H8S5 307 aa11.68□□□□□ -0.54
RPAIN-217ENST00000575711 RBFOX1Q9NWB1 397 aaKnown RBP11.68□□□□□ -0.54
RPAIN-217ENST00000575711 ING4Q9UNL4 249 aa11.68□□□□□ -0.54
RPAIN-217ENST00000575711 AK6Q9Y3D8 172 aaKnown RBP11.68□□□□□ -0.54
RPAIN-217ENST00000575711 RFPL4AA6NLU0 287 aa11.67□□□□□ -0.54
RPAIN-217ENST00000575711 F5H0A9 414 aaPredicted RBP11.67□□□□□ -0.54
RPAIN-217ENST00000575711 RFPL4AL1F8VTS6 287 aa11.67□□□□□ -0.54
RPAIN-217ENST00000575711 F8VVB4 439 aa11.67□□□□□ -0.54
RPAIN-217ENST00000575711 F8VWA3 439 aa11.67□□□□□ -0.54
RPAIN-217ENST00000575711 PDCD5O14737 125 aa11.67□□□□□ -0.54
RPAIN-217ENST00000575711 TNFRSF13BO14836 293 aaPredicted RBP11.67□□□□□ -0.54
RPAIN-217ENST00000575711 TMPRSS2O15393 492 aa11.67□□□□□ -0.54
RPAIN-217ENST00000575711 SFTPBP07988 381 aa11.67□□□□□ -0.54
RPAIN-217ENST00000575711 WNT2P09544 360 aa11.67□□□□□ -0.54
RPAIN-217ENST00000575711 PSG2P11465 335 aa11.67□□□□□ -0.54
RPAIN-217ENST00000575711 PRKACAP17612 351 aa11.67□□□□□ -0.54
RPAIN-217ENST00000575711 GABRA2P47869 451 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms