RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 Q499Y3 187 aa12.67□□□□□ -0.38
LITAF-217ENST00000575426 LRRC10Q5BKY1 277 aa12.67□□□□□ -0.38
LITAF-217ENST00000575426 ATPAF1Q5TC12 328 aaPredicted RBP12.67□□□□□ -0.38
LITAF-217ENST00000575426 STUMQ69YW2 141 aa12.67□□□□□ -0.38
LITAF-217ENST00000575426 BTNL3Q6UXE8 466 aa12.67□□□□□ -0.38
LITAF-217ENST00000575426 ACP7Q6ZNF0 438 aa12.67□□□□□ -0.38
LITAF-217ENST00000575426 RGP1Q92546 391 aaPredicted RBP12.67□□□□□ -0.38
LITAF-217ENST00000575426 SGCDQ92629 289 aa12.67□□□□□ -0.38
LITAF-217ENST00000575426 THRSPQ92748 146 aa12.67□□□□□ -0.38
LITAF-217ENST00000575426 SLAMF9Q96A28 289 aa12.67□□□□□ -0.38
LITAF-217ENST00000575426 CEP19Q96LK0 163 aa12.67□□□□□ -0.38
LITAF-217ENST00000575426 ZNF488Q96MN9 340 aa12.67□□□□□ -0.38
LITAF-217ENST00000575426 MRI1Q9BV20 369 aa12.67□□□□□ -0.38
LITAF-217ENST00000575426 YTHDF1Q9BYJ9 559 aaKnown RBP12.67□□□□□ -0.38
LITAF-217ENST00000575426 CKLFQ9UBR5 152 aa12.67□□□□□ -0.38
LITAF-217ENST00000575426 SETD2Q9BYW2 2564 aaPredicted RBP12.67□□□□□ -0.38
LITAF-217ENST00000575426 KIAA1324LA8MWY0 1029 aaPredicted RBP12.66□□□□□ -0.38
LITAF-217ENST00000575426 DVL1O14640 695 aa12.66□□□□□ -0.38
LITAF-217ENST00000575426 INMTO95050 263 aa12.66□□□□□ -0.38
LITAF-217ENST00000575426 PSG2P11465 335 aa12.66□□□□□ -0.38
LITAF-217ENST00000575426 IL13RA1P78552 427 aa12.66□□□□□ -0.38
LITAF-217ENST00000575426 IRF3Q14653 427 aa12.66□□□□□ -0.38
LITAF-217ENST00000575426 FIP1L1Q6UN15 594 aaKnown RBP12.66□□□□□ -0.38
LITAF-217ENST00000575426 ZNF841Q6ZN19 808 aa12.66□□□□□ -0.38
LITAF-217ENST00000575426 IL17RELQ6ZVW7 336 aa12.66□□□□□ -0.38
LITAF-217ENST00000575426 SATL1Q86VE3 508 aa12.66□□□□□ -0.38
LITAF-217ENST00000575426 Q8IYB0 196 aa12.66□□□□□ -0.38
LITAF-217ENST00000575426 MS4A15Q8N5U1 240 aa12.66□□□□□ -0.38
LITAF-217ENST00000575426 ANGPTL6Q8NI99 470 aa12.66□□□□□ -0.38
LITAF-217ENST00000575426 RAB40AQ8WXH6 277 aa12.66□□□□□ -0.38
LITAF-217ENST00000575426 ST8SIA4Q92187 359 aa12.66□□□□□ -0.38
LITAF-217ENST00000575426 UFD1Q92890 307 aa12.66□□□□□ -0.38
LITAF-217ENST00000575426 RFT1Q96AA3 541 aa12.66□□□□□ -0.38
LITAF-217ENST00000575426 PGLYRP3Q96LB9 341 aa12.66□□□□□ -0.38
LITAF-217ENST00000575426 SPACA5Q96QH8 159 aa12.66□□□□□ -0.38
LITAF-217ENST00000575426 OR5M11Q96RB7 305 aa12.66□□□□□ -0.38
LITAF-217ENST00000575426 GPER1Q99527 375 aa12.66□□□□□ -0.38
LITAF-217ENST00000575426 NRIP2Q9BQI9 281 aa12.66□□□□□ -0.38
LITAF-217ENST00000575426 C7orf69Q9H7B7 122 aa12.66□□□□□ -0.38
LITAF-217ENST00000575426 TAS2R4Q9NYW5 299 aa12.66□□□□□ -0.38
LITAF-217ENST00000575426 CTSZQ9UBR2 303 aa12.66□□□□□ -0.38
LITAF-217ENST00000575426 FN1P02751 2386 aaKnown RBP12.66□□□□□ -0.38
LITAF-217ENST00000575426 TRBV5-5A0A0J9YX44 114 aa12.65□□□□□ -0.38
LITAF-217ENST00000575426 RFPL4AA6NLU0 287 aa12.65□□□□□ -0.38
LITAF-217ENST00000575426 RFPL4AL1F8VTS6 287 aa12.65□□□□□ -0.38
LITAF-217ENST00000575426 GPR37O15354 613 aa12.65□□□□□ -0.38
LITAF-217ENST00000575426 ENSAO43768 121 aaKnown RBP12.65□□□□□ -0.38
LITAF-217ENST00000575426 ECDO95905 644 aaPredicted RBP12.65□□□□□ -0.38
LITAF-217ENST00000575426 HSMCR30P0CW71 290 aa12.65□□□□□ -0.38
LITAF-217ENST00000575426 TMEM225BP0DP42 221 aa12.65□□□□□ -0.38
LITAF-217ENST00000575426 SRD5A1P18405 259 aa12.65□□□□□ -0.38
LITAF-217ENST00000575426 MAPK3P27361 379 aaPredicted RBP12.65□□□□□ -0.38
LITAF-217ENST00000575426 GABARAPL2P60520 117 aa12.65□□□□□ -0.38
LITAF-217ENST00000575426 PDZK1IP1Q13113 114 aa12.65□□□□□ -0.38
LITAF-217ENST00000575426 IKZF1Q13422 519 aa12.65□□□□□ -0.38
LITAF-217ENST00000575426 KISS1Q15726 138 aa12.65□□□□□ -0.38
LITAF-217ENST00000575426 C11orf91Q3C1V1 193 aa12.65□□□□□ -0.38
LITAF-217ENST00000575426 ZNF788Q6ZQV5 615 aa12.65□□□□□ -0.38
LITAF-217ENST00000575426 BATF2Q8N1L9 274 aa12.65□□□□□ -0.38
LITAF-217ENST00000575426 OR13C5Q8NGS8 318 aa12.65□□□□□ -0.38
LITAF-217ENST00000575426 NUDT16L1Q9BRJ7 211 aaKnown RBP12.65□□□□□ -0.38
LITAF-217ENST00000575426 ISYNA1Q9NPH2 558 aa12.65□□□□□ -0.38
LITAF-217ENST00000575426 MMP26Q9NRE1 261 aa12.65□□□□□ -0.38
LITAF-217ENST00000575426 MTCH1Q9NZJ7 389 aa12.65□□□□□ -0.38
LITAF-217ENST00000575426 OR14J1Q9UGF5 321 aa12.65□□□□□ -0.38
LITAF-217ENST00000575426 LSM2Q9Y333 95 aaKnown RBP12.65□□□□□ -0.38
LITAF-217ENST00000575426 INSIG2Q9Y5U4 225 aa12.65□□□□□ -0.38
LITAF-217ENST00000575426 IGHV2-70DA0A0C4DH43 119 aa12.64□□□□□ -0.39
LITAF-217ENST00000575426 ZNF879B4DU55 563 aa12.64□□□□□ -0.39
LITAF-217ENST00000575426 SPRY1O43609 319 aaPredicted RBP12.64□□□□□ -0.39
LITAF-217ENST00000575426 MRPS14O60783 128 aaKnown RBP12.64□□□□□ -0.39
LITAF-217ENST00000575426 ALDOBP05062 364 aa12.64□□□□□ -0.39
LITAF-217ENST00000575426 PRDX2P32119 198 aa12.64□□□□□ -0.39
LITAF-217ENST00000575426 TGFBR2P37173 567 aa12.64□□□□□ -0.39
LITAF-217ENST00000575426 CAPZA1P52907 286 aa12.64□□□□□ -0.39
LITAF-217ENST00000575426 GPR50Q13585 617 aa12.64□□□□□ -0.39
LITAF-217ENST00000575426 SVOPQ8N4V2 548 aa12.64□□□□□ -0.39
LITAF-217ENST00000575426 FAM216BQ8N7L0 139 aa12.64□□□□□ -0.39
LITAF-217ENST00000575426 PNLDC1Q8NA58 520 aaKnown RBP12.64□□□□□ -0.39
LITAF-217ENST00000575426 EMG1Q92979 244 aaKnown RBP12.64□□□□□ -0.39
LITAF-217ENST00000575426 GAFA1Q96PS6 74 aa12.64□□□□□ -0.39
LITAF-217ENST00000575426 OR14A2Q96R54 314 aa12.64□□□□□ -0.39
LITAF-217ENST00000575426 HES4Q9HCC6 221 aa12.64□□□□□ -0.39
LITAF-217ENST00000575426 SMURF1Q9HCE7 757 aa12.64□□□□□ -0.39
LITAF-217ENST00000575426 TMEM138Q9NPI0 162 aa12.64□□□□□ -0.39
LITAF-217ENST00000575426 GLS2Q9UI32 602 aa12.64□□□□□ -0.39
LITAF-217ENST00000575426 AUP1Q9Y679 476 aa12.64□□□□□ -0.39
LITAF-217ENST00000575426 IGKV1D-17A0A075B6S4 117 aa12.63□□□□□ -0.39
LITAF-217ENST00000575426 KIR2DS1A0A191URI9 304 aa12.63□□□□□ -0.39
LITAF-217ENST00000575426 SIGLEC5O15389 551 aa12.63□□□□□ -0.39
LITAF-217ENST00000575426 KNG1P01042 644 aa12.63□□□□□ -0.39
LITAF-217ENST00000575426 LIPFP07098 398 aa12.63□□□□□ -0.39
LITAF-217ENST00000575426 FAM157CP0CG43 387 aa12.63□□□□□ -0.39
LITAF-217ENST00000575426 HOXB4P17483 251 aaPredicted RBP12.63□□□□□ -0.39
LITAF-217ENST00000575426 NDUFB7P17568 137 aa12.63□□□□□ -0.39
LITAF-217ENST00000575426 BDKRB2P30411 391 aa12.63□□□□□ -0.39
LITAF-217ENST00000575426 MAP2K4P45985 399 aa12.63□□□□□ -0.39
LITAF-217ENST00000575426 ERVK11-1P61568 191 aa12.63□□□□□ -0.39
LITAF-217ENST00000575426 RPS11P62280 158 aaKnown RBP eCLIP12.63□□□□□ -0.39
LITAF-217ENST00000575426 ZNF529Q6P280 563 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms