RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 TMEM186Q96B77 213 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 MED30Q96HR3 178 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 PGLYRP3Q96LB9 341 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 OPALINQ96PE5 141 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 OR5M11Q96RB7 305 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 SSBP3Q9BWW4 388 aaPredicted RBP9.21□□□□□ -0.94
CHD3-216ENST00000573936 HIF1ANQ9NWT6 349 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 NLKQ9UBE8 527 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 KAAG1Q9UBP8 84 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 LPAR3Q9UBY5 353 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 POLR3KQ9Y2Y1 108 aaPredicted RBP9.21□□□□□ -0.94
CHD3-216ENST00000573936 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.21□□□□□ -0.945e-6■□□□□ 9.9
CHD3-216ENST00000573936 IGHV3OR15-7A0A075B7D8 119 aa9.2□□□□□ -0.94
CHD3-216ENST00000573936 PNMA8CA0A1B0GUJ8 204 aa9.2□□□□□ -0.94
CHD3-216ENST00000573936 NKX6-3A6NJ46 265 aa9.2□□□□□ -0.94
CHD3-216ENST00000573936 SYNGR1O43759 233 aa9.2□□□□□ -0.94
CHD3-216ENST00000573936 ALDOBP05062 364 aa9.2□□□□□ -0.94
CHD3-216ENST00000573936 HCKP08631 526 aa9.2□□□□□ -0.94
CHD3-216ENST00000573936 PGA5P0DJD9 388 aa9.2□□□□□ -0.94
CHD3-216ENST00000573936 PITPNBP48739 271 aa9.2□□□□□ -0.94
CHD3-216ENST00000573936 PPP3R1P63098 170 aa9.2□□□□□ -0.94
CHD3-216ENST00000573936 LCN2P80188 198 aa9.2□□□□□ -0.94
CHD3-216ENST00000573936 NEDD8Q15843 81 aa9.2□□□□□ -0.94
CHD3-216ENST00000573936 SMIM21Q3B7S5 101 aa9.2□□□□□ -0.94
CHD3-216ENST00000573936 CD276Q5ZPR3 534 aa9.2□□□□□ -0.94
CHD3-216ENST00000573936 LYPD2Q6UXB3 125 aa9.2□□□□□ -0.94
CHD3-216ENST00000573936 ACP7Q6ZNF0 438 aa9.2□□□□□ -0.94
CHD3-216ENST00000573936 CALHM1Q8IU99 346 aa9.2□□□□□ -0.94
CHD3-216ENST00000573936 TEX29Q8N6K0 151 aa9.2□□□□□ -0.94
CHD3-216ENST00000573936 RGP1Q92546 391 aaPredicted RBP9.2□□□□□ -0.94
CHD3-216ENST00000573936 BEX2Q9BXY8 128 aa9.2□□□□□ -0.94
CHD3-216ENST00000573936 MRPS26Q9BYN8 205 aaKnown RBP9.2□□□□□ -0.94
CHD3-216ENST00000573936 RHOFQ9HBH0 211 aa9.2□□□□□ -0.94
CHD3-216ENST00000573936 LPAR2Q9HBW0 351 aa9.2□□□□□ -0.94
CHD3-216ENST00000573936 CKLFQ9UBR5 152 aa9.2□□□□□ -0.94
CHD3-216ENST00000573936 CLN8Q9UBY8 286 aa9.2□□□□□ -0.94
CHD3-216ENST00000573936 OR5V1Q9UGF6 321 aa9.2□□□□□ -0.94
CHD3-216ENST00000573936 CDC42EP3Q9UKI2 254 aa9.2□□□□□ -0.94
CHD3-216ENST00000573936 IGKV1-27A0A075B6S5 117 aa9.19□□□□□ -0.94
CHD3-216ENST00000573936 A0A0G2JMP0 313 aa9.19□□□□□ -0.94
CHD3-216ENST00000573936 A0A0X1KG70 313 aa9.19□□□□□ -0.94
CHD3-216ENST00000573936 OR2AT4A6NND4 320 aa9.19□□□□□ -0.94
CHD3-216ENST00000573936 ZNF879B4DU55 563 aa9.19□□□□□ -0.94
CHD3-216ENST00000573936 TRAPPC2LH3BP13 241 aa9.19□□□□□ -0.94
CHD3-216ENST00000573936 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.19□□□□□ -0.94
CHD3-216ENST00000573936 J3QLI3 93 aa9.19□□□□□ -0.94
CHD3-216ENST00000573936 GPR37O15354 613 aa9.19□□□□□ -0.94
CHD3-216ENST00000573936 TMPRSS2O15393 492 aa9.19□□□□□ -0.94
CHD3-216ENST00000573936 GPX5O75715 221 aa9.19□□□□□ -0.94
CHD3-216ENST00000573936 NXPH2O95156 264 aa9.19□□□□□ -0.94
CHD3-216ENST00000573936 FAM157CP0CG43 387 aa9.19□□□□□ -0.94
CHD3-216ENST00000573936 GMFBP60983 142 aa9.19□□□□□ -0.94
CHD3-216ENST00000573936 RPS11P62280 158 aaKnown RBP eCLIP9.19□□□□□ -0.94
CHD3-216ENST00000573936 MLLT11Q13015 90 aaPredicted RBP9.19□□□□□ -0.94
CHD3-216ENST00000573936 PDZK1IP1Q13113 114 aa9.19□□□□□ -0.94
CHD3-216ENST00000573936 TRAM1Q15629 374 aa9.19□□□□□ -0.94
CHD3-216ENST00000573936 UBE2UQ5VVX9 321 aa9.19□□□□□ -0.94
CHD3-216ENST00000573936 DCAF12L2Q5VW00 463 aa9.19□□□□□ -0.94
CHD3-216ENST00000573936 WDR25Q64LD2 544 aaPredicted RBP9.19□□□□□ -0.94
CHD3-216ENST00000573936 STUMQ69YW2 141 aa9.19□□□□□ -0.94
CHD3-216ENST00000573936 ZNF529Q6P280 563 aa9.19□□□□□ -0.94
CHD3-216ENST00000573936 FIP1L1Q6UN15 594 aaKnown RBP9.19□□□□□ -0.94
CHD3-216ENST00000573936 ZNF841Q6ZN19 808 aa9.19□□□□□ -0.94
CHD3-216ENST00000573936 SLC25A26Q70HW3 274 aa9.19□□□□□ -0.94
CHD3-216ENST00000573936 ZNF367Q7RTV3 350 aa9.19□□□□□ -0.94
CHD3-216ENST00000573936 SAXO1Q8IYX7 474 aa9.19□□□□□ -0.94
CHD3-216ENST00000573936 ZSCAN4Q8NAM6 433 aaPredicted RBP9.19□□□□□ -0.94
CHD3-216ENST00000573936 OR4M2Q8NGB6 313 aa9.19□□□□□ -0.94
CHD3-216ENST00000573936 FCGR1BQ92637 280 aa9.19□□□□□ -0.94
CHD3-216ENST00000573936 CEP19Q96LK0 163 aa9.19□□□□□ -0.94
CHD3-216ENST00000573936 NRIP2Q9BQI9 281 aa9.19□□□□□ -0.94
CHD3-216ENST00000573936 SHARPINQ9H0F6 387 aa9.19□□□□□ -0.94
CHD3-216ENST00000573936 WDR13Q9H1Z4 485 aa9.19□□□□□ -0.94
CHD3-216ENST00000573936 TMEM138Q9NPI0 162 aa9.19□□□□□ -0.94
CHD3-216ENST00000573936 TAS2R4Q9NYW5 299 aa9.19□□□□□ -0.94
CHD3-216ENST00000573936 FOXJ3Q9UPW0 622 aa9.19□□□□□ -0.94
CHD3-216ENST00000573936 LOC105371242A0A075B767 164 aa9.18□□□□□ -0.94
CHD3-216ENST00000573936 TRBV5-7A0A0A0MS05 114 aa9.18□□□□□ -0.94
CHD3-216ENST00000573936 NDUFB3O43676 98 aa9.18□□□□□ -0.94
CHD3-216ENST00000573936 INMTO95050 263 aa9.18□□□□□ -0.94
CHD3-216ENST00000573936 ECDO95905 644 aaPredicted RBP9.18□□□□□ -0.94
CHD3-216ENST00000573936 KNG1P01042 644 aa9.18□□□□□ -0.94
CHD3-216ENST00000573936 HSMCR30P0CW71 290 aa9.18□□□□□ -0.94
CHD3-216ENST00000573936 PSG2P11465 335 aa9.18□□□□□ -0.94
CHD3-216ENST00000573936 JUNBP17275 347 aaPredicted RBP9.18□□□□□ -0.94
CHD3-216ENST00000573936 PSMA1P25786 263 aaKnown RBP9.18□□□□□ -0.94
CHD3-216ENST00000573936 ZFP36P26651 326 aaKnown RBP9.18□□□□□ -0.94
CHD3-216ENST00000573936 BDKRB2P30411 391 aa9.18□□□□□ -0.94
CHD3-216ENST00000573936 TGFBR2P37173 567 aa9.18□□□□□ -0.94
CHD3-216ENST00000573936 GABRA2P47869 451 aa9.18□□□□□ -0.94
CHD3-216ENST00000573936 POU3F4P49335 361 aa9.18□□□□□ -0.94
CHD3-216ENST00000573936 ERVK11-1P61568 191 aa9.18□□□□□ -0.94
CHD3-216ENST00000573936 SEC61A1P61619 476 aaKnown RBP9.18□□□□□ -0.94
CHD3-216ENST00000573936 HOXA4Q00056 320 aaPredicted RBP9.18□□□□□ -0.94
CHD3-216ENST00000573936 TPBGQ13641 420 aa9.18□□□□□ -0.94
CHD3-216ENST00000573936 KISS1Q15726 138 aa9.18□□□□□ -0.94
CHD3-216ENST00000573936 CR1LQ2VPA4 569 aa9.18□□□□□ -0.94
CHD3-216ENST00000573936 LRRC10Q5BKY1 277 aa9.18□□□□□ -0.94
CHD3-216ENST00000573936 BTNL3Q6UXE8 466 aa9.18□□□□□ -0.94
CHD3-216ENST00000573936 UNQ9370/PRO34162Q6UXP9 181 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms