RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 STUMQ69YW2 141 aa18.44■□□□□ 0.54
RAB40B-207ENST00000572603 ACP7Q6ZNF0 438 aa18.44■□□□□ 0.54
RAB40B-207ENST00000572603 SPICQ8N5J4 248 aa18.44■□□□□ 0.54
RAB40B-207ENST00000572603 YIPF6Q96EC8 236 aa18.44■□□□□ 0.54
RAB40B-207ENST00000572603 ZNF665Q9H7R5 613 aa18.44■□□□□ 0.54
RAB40B-207ENST00000572603 STUB1Q9UNE7 303 aa18.44■□□□□ 0.54
RAB40B-207ENST00000572603 CSPG4Q6UVK1 2322 aa18.44■□□□□ 0.54
RAB40B-207ENST00000572603 TRAV38-1A0A0B4J264 116 aa18.43■□□□□ 0.54
RAB40B-207ENST00000572603 SHISA3A0PJX4 238 aa18.43■□□□□ 0.54
RAB40B-207ENST00000572603 MAGEB3O15480 346 aa18.43■□□□□ 0.54
RAB40B-207ENST00000572603 ARL6IP5O75915 188 aa18.43■□□□□ 0.54
RAB40B-207ENST00000572603 MUC1P15941 1255 aaPredicted RBP18.43■□□□□ 0.54
RAB40B-207ENST00000572603 CD36P16671 472 aa18.43■□□□□ 0.54
RAB40B-207ENST00000572603 AMY2BP19961 511 aa18.43■□□□□ 0.54
RAB40B-207ENST00000572603 ZNF93P35789 620 aaPredicted RBP18.43■□□□□ 0.54
RAB40B-207ENST00000572603 OR3A4PP47883 348 aa18.43■□□□□ 0.54
RAB40B-207ENST00000572603 KRTAP1-1Q07627 177 aa18.43■□□□□ 0.54
RAB40B-207ENST00000572603 TMEM249Q2WGJ8 235 aa18.43■□□□□ 0.54
RAB40B-207ENST00000572603 LYPD2Q6UXB3 125 aa18.43■□□□□ 0.54
RAB40B-207ENST00000572603 DCDC5Q6ZRR9 648 aa18.43■□□□□ 0.54
RAB40B-207ENST00000572603 C1QL2Q7Z5L3 287 aa18.43■□□□□ 0.54
RAB40B-207ENST00000572603 SAXO1Q8IYX7 474 aa18.43■□□□□ 0.54
RAB40B-207ENST00000572603 CPNE2Q96FN4 548 aaPredicted RBP18.43■□□□□ 0.54
RAB40B-207ENST00000572603 C1orf159Q96HA4 380 aa18.43■□□□□ 0.54
RAB40B-207ENST00000572603 C18orf12Q96KH6 178 aa18.43■□□□□ 0.54
RAB40B-207ENST00000572603 CEP19Q96LK0 163 aa18.43■□□□□ 0.54
RAB40B-207ENST00000572603 GFI1Q99684 422 aa18.43■□□□□ 0.54
RAB40B-207ENST00000572603 OR51E2Q9H255 320 aa18.43■□□□□ 0.54
RAB40B-207ENST00000572603 PATZ1Q9HBE1 687 aaKnown RBP18.43■□□□□ 0.54
RAB40B-207ENST00000572603 TCF7L1Q9HCS4 588 aa18.43■□□□□ 0.54
RAB40B-207ENST00000572603 DOCK11Q5JSL3 2073 aa18.43■□□□□ 0.54
RAB40B-207ENST00000572603 KDM4BO94953 1096 aa18.42■□□□□ 0.54
RAB40B-207ENST00000572603 SRMP19623 302 aa18.42■□□□□ 0.54
RAB40B-207ENST00000572603 BCL3P20749 454 aa18.42■□□□□ 0.54
RAB40B-207ENST00000572603 GADD45AP24522 165 aa18.42■□□□□ 0.54
RAB40B-207ENST00000572603 CALRP27797 417 aaKnown RBP18.42■□□□□ 0.54
RAB40B-207ENST00000572603 FGF9P31371 208 aaPredicted RBP18.42■□□□□ 0.54
RAB40B-207ENST00000572603 NPBWR2P48146 333 aa18.42■□□□□ 0.54
RAB40B-207ENST00000572603 SATL1Q86VE3 508 aa18.42■□□□□ 0.54
RAB40B-207ENST00000572603 MKXQ8IYA7 352 aa18.42■□□□□ 0.54
RAB40B-207ENST00000572603 NKAIN3Q8N8D7 197 aa18.42■□□□□ 0.54
RAB40B-207ENST00000572603 ZSCAN4Q8NAM6 433 aaPredicted RBP18.42■□□□□ 0.54
RAB40B-207ENST00000572603 TNFAIP8L1Q8WVP5 186 aa18.42■□□□□ 0.54
RAB40B-207ENST00000572603 C12orf43Q96C57 262 aaKnown RBP18.42■□□□□ 0.54
RAB40B-207ENST00000572603 SNTG1Q9NSN8 517 aa18.42■□□□□ 0.54
RAB40B-207ENST00000572603 RBFOX1Q9NWB1 397 aaKnown RBP18.42■□□□□ 0.54
RAB40B-207ENST00000572603 TXNL4BQ9NX01 149 aaKnown RBP18.42■□□□□ 0.54
RAB40B-207ENST00000572603 RASL12Q9NYN1 266 aa18.42■□□□□ 0.54
RAB40B-207ENST00000572603 NLKQ9UBE8 527 aa18.42■□□□□ 0.54
RAB40B-207ENST00000572603 CTSZQ9UBR2 303 aa18.42■□□□□ 0.54
RAB40B-207ENST00000572603 ZNF222Q9UK12 451 aa18.42■□□□□ 0.54
RAB40B-207ENST00000572603 MALRD1Q5VYJ5 2156 aa18.42■□□□□ 0.54
RAB40B-207ENST00000572603 FAM157AC9JC47 383 aa18.41■□□□□ 0.54
RAB40B-207ENST00000572603 FCN3O75636 299 aa18.41■□□□□ 0.54
RAB40B-207ENST00000572603 GYPAP02724 150 aa18.41■□□□□ 0.54
RAB40B-207ENST00000572603 TFF1P04155 84 aa18.41■□□□□ 0.54
RAB40B-207ENST00000572603 IGHV4-31P0DP07 118 aa18.41■□□□□ 0.54
RAB40B-207ENST00000572603 CD37P11049 281 aa18.41■□□□□ 0.54
RAB40B-207ENST00000572603 CD99P14209 185 aa18.41■□□□□ 0.54
RAB40B-207ENST00000572603 SEC61A1P61619 476 aaKnown RBP18.41■□□□□ 0.54
RAB40B-207ENST00000572603 SMIM21Q3B7S5 101 aa18.41■□□□□ 0.54
RAB40B-207ENST00000572603 C22orf42Q6IC83 251 aa18.41■□□□□ 0.54
RAB40B-207ENST00000572603 ASCL4Q6XD76 172 aa18.41■□□□□ 0.54
RAB40B-207ENST00000572603 CDH26Q8IXH8 852 aa18.41■□□□□ 0.54
RAB40B-207ENST00000572603 PXT1Q8NFP0 134 aa18.41■□□□□ 0.54
RAB40B-207ENST00000572603 OR13F1Q8NGS4 319 aa18.41■□□□□ 0.54
RAB40B-207ENST00000572603 OR51F2Q8NH61 342 aa18.41■□□□□ 0.54
RAB40B-207ENST00000572603 ANGPTL6Q8NI99 470 aa18.41■□□□□ 0.54
RAB40B-207ENST00000572603 TMIGD2Q96BF3 282 aa18.41■□□□□ 0.54
RAB40B-207ENST00000572603 GPER1Q99527 375 aa18.41■□□□□ 0.54
RAB40B-207ENST00000572603 SMURF1Q9HCE7 757 aa18.41■□□□□ 0.54
RAB40B-207ENST00000572603 IL36RNQ9UBH0 155 aa18.41■□□□□ 0.54
RAB40B-207ENST00000572603 DNAJB11Q9UBS4 358 aa18.41■□□□□ 0.54
RAB40B-207ENST00000572603 ARHGAP32A7KAX9 2087 aa18.41■□□□□ 0.54
RAB40B-207ENST00000572603 IGKV1D-17A0A075B6S4 117 aa18.4■□□□□ 0.54
RAB40B-207ENST00000572603 A0A1B0GW55 424 aa18.4■□□□□ 0.54
RAB40B-207ENST00000572603 NXPH2O95156 264 aa18.4■□□□□ 0.54
RAB40B-207ENST00000572603 TFAP2AP05549 437 aa18.4■□□□□ 0.54
RAB40B-207ENST00000572603 SFTPBP07988 381 aa18.4■□□□□ 0.54
RAB40B-207ENST00000572603 INHBBP09529 407 aa18.4■□□□□ 0.54
RAB40B-207ENST00000572603 DUX4L2P0CJ85 424 aa18.4■□□□□ 0.54
RAB40B-207ENST00000572603 DUX4L3P0CJ86 424 aa18.4■□□□□ 0.54
RAB40B-207ENST00000572603 DUX4L4P0CJ87 422 aa18.4■□□□□ 0.54
RAB40B-207ENST00000572603 DUX4L5P0CJ88 424 aa18.4■□□□□ 0.54
RAB40B-207ENST00000572603 DUX4L6P0CJ89 424 aa18.4■□□□□ 0.54
RAB40B-207ENST00000572603 DUX4L7P0CJ90 424 aa18.4■□□□□ 0.54
RAB40B-207ENST00000572603 PSG2P11465 335 aa18.4■□□□□ 0.54
RAB40B-207ENST00000572603 ALDH3B2P48448 385 aa18.4■□□□□ 0.54
RAB40B-207ENST00000572603 MICBQ29980 383 aa18.4■□□□□ 0.54
RAB40B-207ENST00000572603 DUX4L9Q6RFH8 374 aaPredicted RBP18.4■□□□□ 0.54
RAB40B-207ENST00000572603 JAGN1Q8N5M9 183 aa18.4■□□□□ 0.54
RAB40B-207ENST00000572603 OR5T2Q8NGG2 359 aa18.4■□□□□ 0.54
RAB40B-207ENST00000572603 RAB39BQ96DA2 213 aa18.4■□□□□ 0.54
RAB40B-207ENST00000572603 CNTD2Q9H8S5 307 aa18.4■□□□□ 0.54
RAB40B-207ENST00000572603 DUX4Q9UBX2 424 aa18.4■□□□□ 0.54
RAB40B-207ENST00000572603 ANK3Q12955 4377 aaKnown RBP18.39■□□□□ 0.53
RAB40B-207ENST00000572603 MEGF11A6BM72 1044 aa18.39■□□□□ 0.53
RAB40B-207ENST00000572603 OR2AT4A6NND4 320 aa18.39■□□□□ 0.53
RAB40B-207ENST00000572603 TRAPPC2LH3BP13 241 aa18.39■□□□□ 0.53
RAB40B-207ENST00000572603 CYB5AP00167 134 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms