RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 ARMCX4Q5H9R4 360 aa11.12□□□□□ -0.63
CCDC40-205ENST00000571028 WDR82Q6UXN9 313 aa11.12□□□□□ -0.63
CCDC40-205ENST00000571028 KRT74Q7RTS7 529 aa11.12□□□□□ -0.63
CCDC40-205ENST00000571028 ZDHHC22Q8N966 263 aa11.12□□□□□ -0.63
CCDC40-205ENST00000571028 OR5D14Q8NGL3 314 aa11.12□□□□□ -0.63
CCDC40-205ENST00000571028 SEH1LQ96EE3 360 aa11.12□□□□□ -0.63
CCDC40-205ENST00000571028 ZNF488Q96MN9 340 aa11.12□□□□□ -0.63
CCDC40-205ENST00000571028 NKX3-1Q99801 234 aaPredicted RBP11.12□□□□□ -0.63
CCDC40-205ENST00000571028 NEK6Q9HC98 313 aa11.12□□□□□ -0.63
CCDC40-205ENST00000571028 ESM1Q9NQ30 184 aa11.12□□□□□ -0.63
CCDC40-205ENST00000571028 IGKV1-27A0A075B6S5 117 aa11.11□□□□□ -0.63
CCDC40-205ENST00000571028 TRBV5-5A0A0J9YX44 114 aa11.11□□□□□ -0.63
CCDC40-205ENST00000571028 ZNF879B4DU55 563 aa11.11□□□□□ -0.63
CCDC40-205ENST00000571028 MAGEB3O15480 346 aa11.11□□□□□ -0.63
CCDC40-205ENST00000571028 SULT1B1O43704 296 aa11.11□□□□□ -0.63
CCDC40-205ENST00000571028 SYNGR1O43759 233 aa11.11□□□□□ -0.63
CCDC40-205ENST00000571028 TNFAIP8O95379 198 aa11.11□□□□□ -0.63
CCDC40-205ENST00000571028 PTBP3O95758 552 aaKnown RBP11.11□□□□□ -0.63
CCDC40-205ENST00000571028 IGHV2-70P01814 119 aa11.11□□□□□ -0.63
CCDC40-205ENST00000571028 ADRA2CP18825 462 aa11.11□□□□□ -0.63
CCDC40-205ENST00000571028 RAB3AP20336 220 aa11.11□□□□□ -0.63
CCDC40-205ENST00000571028 ZFP36P26651 326 aaKnown RBP11.11□□□□□ -0.63
CCDC40-205ENST00000571028 MTCP1P56278 107 aa11.11□□□□□ -0.63
CCDC40-205ENST00000571028 PPP3R1P63098 170 aa11.11□□□□□ -0.63
CCDC40-205ENST00000571028 MLLT11Q13015 90 aaPredicted RBP11.11□□□□□ -0.63
CCDC40-205ENST00000571028 ACSM3Q53FZ2 586 aa11.11□□□□□ -0.63
CCDC40-205ENST00000571028 UTS2BQ765I0 119 aa11.11□□□□□ -0.63
CCDC40-205ENST00000571028 RNF144BQ7Z419 303 aa11.11□□□□□ -0.63
CCDC40-205ENST00000571028 ZNF573Q86YE8 665 aa11.11□□□□□ -0.63
CCDC40-205ENST00000571028 PARP16Q8N5Y8 322 aa11.11□□□□□ -0.63
CCDC40-205ENST00000571028 GCSAMQ8N6F7 178 aa11.11□□□□□ -0.63
CCDC40-205ENST00000571028 TSPAN14Q8NG11 270 aa11.11□□□□□ -0.63
CCDC40-205ENST00000571028 OR51A2Q8NGJ7 313 aa11.11□□□□□ -0.63
CCDC40-205ENST00000571028 OR5D18Q8NGL1 313 aa11.11□□□□□ -0.63
CCDC40-205ENST00000571028 Q8TCH9 128 aa11.11□□□□□ -0.63
CCDC40-205ENST00000571028 C22orf15Q8WYQ4 148 aa11.11□□□□□ -0.63
CCDC40-205ENST00000571028 AQP3Q92482 292 aa11.11□□□□□ -0.63
CCDC40-205ENST00000571028 ISYNA1Q9NPH2 558 aa11.11□□□□□ -0.63
CCDC40-205ENST00000571028 SNTG1Q9NSN8 517 aa11.11□□□□□ -0.63
CCDC40-205ENST00000571028 DNAJB11Q9UBS4 358 aa11.11□□□□□ -0.63
CCDC40-205ENST00000571028 J3QLI3 93 aa11.1□□□□□ -0.63
CCDC40-205ENST00000571028 J3QT63 122 aa11.1□□□□□ -0.63
CCDC40-205ENST00000571028 CD1AP06126 327 aa11.1□□□□□ -0.63
CCDC40-205ENST00000571028 TGFBR2P37173 567 aa11.1□□□□□ -0.63
CCDC40-205ENST00000571028 RBP2P50120 134 aa11.1□□□□□ -0.63
CCDC40-205ENST00000571028 TPBGQ13641 420 aa11.1□□□□□ -0.63
CCDC40-205ENST00000571028 ZNF181Q2M3W8 571 aa11.1□□□□□ -0.63
CCDC40-205ENST00000571028 FAM27D1Q5T7N8 215 aa11.1□□□□□ -0.63
CCDC40-205ENST00000571028 DCAF12L2Q5VW00 463 aa11.1□□□□□ -0.63
CCDC40-205ENST00000571028 HIST2H2BDQ6DRA6 164 aa11.1□□□□□ -0.63
CCDC40-205ENST00000571028 C1orf229Q6ZS94 237 aaPredicted RBP11.1□□□□□ -0.63
CCDC40-205ENST00000571028 SLC25A26Q70HW3 274 aa11.1□□□□□ -0.63
CCDC40-205ENST00000571028 CEACAM19Q7Z692 300 aa11.1□□□□□ -0.63
CCDC40-205ENST00000571028 CALHM1Q8IU99 346 aa11.1□□□□□ -0.63
CCDC40-205ENST00000571028 OR5T2Q8NGG2 359 aa11.1□□□□□ -0.63
CCDC40-205ENST00000571028 ZNF671Q8TAW3 534 aa11.1□□□□□ -0.63
CCDC40-205ENST00000571028 SLAMF9Q96A28 289 aa11.1□□□□□ -0.63
CCDC40-205ENST00000571028 RAB39BQ96DA2 213 aa11.1□□□□□ -0.63
CCDC40-205ENST00000571028 TECTBQ96PL2 329 aa11.1□□□□□ -0.63
CCDC40-205ENST00000571028 GPER1Q99527 375 aa11.1□□□□□ -0.63
CCDC40-205ENST00000571028 TLNRD1Q9H1K6 362 aa11.1□□□□□ -0.63
CCDC40-205ENST00000571028 WDR13Q9H1Z4 485 aa11.1□□□□□ -0.63
CCDC40-205ENST00000571028 TMEM165Q9HC07 324 aa11.1□□□□□ -0.63
CCDC40-205ENST00000571028 NOX4Q9NPH5 578 aa11.1□□□□□ -0.63
CCDC40-205ENST00000571028 CKLFQ9UBR5 152 aa11.1□□□□□ -0.63
CCDC40-205ENST00000571028 TRRAPQ9Y4A5 3859 aa11.1□□□□□ -0.63
CCDC40-205ENST00000571028 TRAV8-7A0A075B6U6 113 aa11.09□□□□□ -0.63
CCDC40-205ENST00000571028 A0A087WXM4 84 aa11.09□□□□□ -0.63
CCDC40-205ENST00000571028 LGALS8O00214 317 aa11.09□□□□□ -0.63
CCDC40-205ENST00000571028 PIN1P1O15428 100 aa11.09□□□□□ -0.63
CCDC40-205ENST00000571028 AVPP01185 164 aa11.09□□□□□ -0.63
CCDC40-205ENST00000571028 GYPAP02724 150 aa11.09□□□□□ -0.63
CCDC40-205ENST00000571028 TFF1P04155 84 aa11.09□□□□□ -0.63
CCDC40-205ENST00000571028 MAS1P04201 325 aa11.09□□□□□ -0.63
CCDC40-205ENST00000571028 CALCBP10092 127 aa11.09□□□□□ -0.63
CCDC40-205ENST00000571028 CPEP16870 476 aa11.09□□□□□ -0.63
CCDC40-205ENST00000571028 GLRA1P23415 457 aa11.09□□□□□ -0.63
CCDC40-205ENST00000571028 MDH2P40926 338 aaKnown RBP11.09□□□□□ -0.63
CCDC40-205ENST00000571028 IL13RA1P78552 427 aa11.09□□□□□ -0.63
CCDC40-205ENST00000571028 SSX1Q16384 188 aa11.09□□□□□ -0.63
CCDC40-205ENST00000571028 FAM76BQ5HYJ3 339 aa11.09□□□□□ -0.63
CCDC40-205ENST00000571028 UBE2UQ5VVX9 321 aa11.09□□□□□ -0.63
CCDC40-205ENST00000571028 ASPHD2Q6ICH7 369 aa11.09□□□□□ -0.63
CCDC40-205ENST00000571028 LYPD2Q6UXB3 125 aa11.09□□□□□ -0.63
CCDC40-205ENST00000571028 LHFPL2Q6ZUX7 228 aa11.09□□□□□ -0.63
CCDC40-205ENST00000571028 LRRC28Q86X40 367 aaPredicted RBP11.09□□□□□ -0.63
CCDC40-205ENST00000571028 MS4A15Q8N5U1 240 aa11.09□□□□□ -0.63
CCDC40-205ENST00000571028 FCGR1BQ92637 280 aa11.09□□□□□ -0.63
CCDC40-205ENST00000571028 SPSB1Q96BD6 273 aa11.09□□□□□ -0.63
CCDC40-205ENST00000571028 DERL3Q96Q80 235 aa11.09□□□□□ -0.63
CCDC40-205ENST00000571028 TMEM246Q9BRR3 403 aa11.09□□□□□ -0.63
CCDC40-205ENST00000571028 TMPRSS13Q9BYE2 586 aa11.09□□□□□ -0.63
CCDC40-205ENST00000571028 ZNF665Q9H7R5 613 aa11.09□□□□□ -0.63
CCDC40-205ENST00000571028 ZMAT3Q9HA38 289 aaKnown RBP11.09□□□□□ -0.63
CCDC40-205ENST00000571028 POLDIP2Q9Y2S7 368 aa11.09□□□□□ -0.63
CCDC40-205ENST00000571028 TRBV5-7A0A0A0MS05 114 aa11.08□□□□□ -0.64
CCDC40-205ENST00000571028 OOEPA6NGQ2 149 aa11.08□□□□□ -0.64
CCDC40-205ENST00000571028 POM121CA8CG34 1229 aa11.08□□□□□ -0.64
CCDC40-205ENST00000571028 ANGPTL7O43827 346 aa11.08□□□□□ -0.64
CCDC40-205ENST00000571028 CYB5AP00167 134 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms