RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 CALHM1Q8IU99 346 aa11.96□□□□□ -0.49
NDE1-203ENST00000570727 ELMOD2Q8IZ81 293 aa11.96□□□□□ -0.49
NDE1-203ENST00000570727 BATF2Q8N1L9 274 aa11.96□□□□□ -0.49
NDE1-203ENST00000570727 OR2T6Q8NHC8 308 aa11.96□□□□□ -0.49
NDE1-203ENST00000570727 NRBF2Q96F24 287 aa11.96□□□□□ -0.49
NDE1-203ENST00000570727 RAB18Q9NP72 206 aa11.96□□□□□ -0.49
NDE1-203ENST00000570727 PAPOLBQ9NRJ5 636 aaKnown RBP11.96□□□□□ -0.49
NDE1-203ENST00000570727 SERTAD4Q9NUC0 356 aa11.96□□□□□ -0.49
NDE1-203ENST00000570727 USE1Q9NZ43 259 aa11.96□□□□□ -0.49
NDE1-203ENST00000570727 OR52A1Q9UKL2 312 aa11.96□□□□□ -0.49
NDE1-203ENST00000570727 R4GMQ9 66 aa11.96□□□□□ -0.49
NDE1-203ENST00000570727 VGLL3A8MV65 326 aa11.95□□□□□ -0.5
NDE1-203ENST00000570727 LOC110117498-PIK3R3F6TDL0 507 aa11.95□□□□□ -0.5
NDE1-203ENST00000570727 K7N7A8 449 aa11.95□□□□□ -0.5
NDE1-203ENST00000570727 M0R129 80 aa11.95□□□□□ -0.5
NDE1-203ENST00000570727 RAB13P51153 203 aa11.95□□□□□ -0.5
NDE1-203ENST00000570727 LGALS4P56470 323 aa11.95□□□□□ -0.5
NDE1-203ENST00000570727 AADACL4Q5VUY2 407 aa11.95□□□□□ -0.5
NDE1-203ENST00000570727 ZNF322Q6U7Q0 402 aaPredicted RBP11.95□□□□□ -0.5
NDE1-203ENST00000570727 ZNF782Q6ZMW2 699 aaPredicted RBP11.95□□□□□ -0.5
NDE1-203ENST00000570727 PLEKHG7Q6ZR37 379 aa11.95□□□□□ -0.5
NDE1-203ENST00000570727 SLC35F2Q8IXU6 374 aa11.95□□□□□ -0.5
NDE1-203ENST00000570727 DNAJC9Q8WXX5 260 aa11.95□□□□□ -0.5
NDE1-203ENST00000570727 CNN2Q99439 309 aaKnown RBP11.95□□□□□ -0.5
NDE1-203ENST00000570727 ZNF702PQ9H963 129 aa11.95□□□□□ -0.5
NDE1-203ENST00000570727 ADGRL4Q9HBW9 690 aa11.95□□□□□ -0.5
NDE1-203ENST00000570727 OR14J1Q9UGF5 321 aa11.95□□□□□ -0.5
NDE1-203ENST00000570727 MRM2Q9UI43 246 aaKnown RBP11.95□□□□□ -0.5
NDE1-203ENST00000570727 GTF2A1LQ9UNN4 478 aa11.95□□□□□ -0.5
NDE1-203ENST00000570727 POLDIP2Q9Y2S7 368 aa11.95□□□□□ -0.5
NDE1-203ENST00000570727 hCG_1809904A0A1W2PP81 198 aa11.94□□□□□ -0.5
NDE1-203ENST00000570727 A0A1W2PPE2 198 aa11.94□□□□□ -0.5
NDE1-203ENST00000570727 A0A1W2PR64 198 aa11.94□□□□□ -0.5
NDE1-203ENST00000570727 A0A1W2PRV1 198 aa11.94□□□□□ -0.5
NDE1-203ENST00000570727 VSIG10L2P0DP72 767 aa11.94□□□□□ -0.5
NDE1-203ENST00000570727 PIPP12273 146 aaPredicted RBP11.94□□□□□ -0.5
NDE1-203ENST00000570727 EPHA2P29317 976 aa11.94□□□□□ -0.5
NDE1-203ENST00000570727 ESRRGP62508 458 aa11.94□□□□□ -0.5
NDE1-203ENST00000570727 COL10A1Q03692 680 aa11.94□□□□□ -0.5
NDE1-203ENST00000570727 FLOT2Q14254 428 aa11.94□□□□□ -0.5
NDE1-203ENST00000570727 HABP2Q14520 560 aaPredicted RBP11.94□□□□□ -0.5
NDE1-203ENST00000570727 FBLN7Q53RD9 439 aa11.94□□□□□ -0.5
NDE1-203ENST00000570727 BCL2L15Q5TBC7 163 aa11.94□□□□□ -0.5
NDE1-203ENST00000570727 LIAT1Q6ZQX7 453 aa11.94□□□□□ -0.5
NDE1-203ENST00000570727 Q8N2B8 174 aa11.94□□□□□ -0.5
NDE1-203ENST00000570727 TCEANCQ8N8B7 351 aa11.94□□□□□ -0.5
NDE1-203ENST00000570727 UTP4Q969X6 686 aaKnown RBP11.94□□□□□ -0.5
NDE1-203ENST00000570727 NPFFR1Q9GZQ6 430 aa11.94□□□□□ -0.5
NDE1-203ENST00000570727 MOB1AQ9H8S9 216 aa11.94□□□□□ -0.5
NDE1-203ENST00000570727 SLC22A13Q9Y226 551 aa11.94□□□□□ -0.5
NDE1-203ENST00000570727 POMPQ9Y244 141 aa11.94□□□□□ -0.5
NDE1-203ENST00000570727 MEX3AA1L020 520 aaKnown RBP11.93□□□□□ -0.5
NDE1-203ENST00000570727 A6NDX4 124 aa11.93□□□□□ -0.5
NDE1-203ENST00000570727 DHRS7CA6NNS2 312 aa11.93□□□□□ -0.5
NDE1-203ENST00000570727 ODF3BA8MYP8 253 aa11.93□□□□□ -0.5
NDE1-203ENST00000570727 F8VVB4 439 aa11.93□□□□□ -0.5
NDE1-203ENST00000570727 F8VWA3 439 aa11.93□□□□□ -0.5
NDE1-203ENST00000570727 MITFO75030 526 aaPredicted RBP11.93□□□□□ -0.5
NDE1-203ENST00000570727 ZNF737O75373 536 aa11.93□□□□□ -0.5
NDE1-203ENST00000570727 PRB2P02812 416 aaPredicted RBP11.93□□□□□ -0.5
NDE1-203ENST00000570727 CCL1P22362 96 aa11.93□□□□□ -0.5
NDE1-203ENST00000570727 ACTR3P61158 418 aa11.93□□□□□ -0.5
NDE1-203ENST00000570727 IL24Q13007 206 aa11.93□□□□□ -0.5
NDE1-203ENST00000570727 NXNL2Q5VZ03 156 aa11.93□□□□□ -0.5
NDE1-203ENST00000570727 SSX6Q7RTT6 188 aa11.93□□□□□ -0.5
NDE1-203ENST00000570727 LYG1Q8N1E2 194 aa11.93□□□□□ -0.5
NDE1-203ENST00000570727 WIPF2Q8TF74 440 aaPredicted RBP11.93□□□□□ -0.5
NDE1-203ENST00000570727 SLC7A6OSQ96CW6 309 aaPredicted RBP11.93□□□□□ -0.5
NDE1-203ENST00000570727 MALSU1Q96EH3 234 aa11.93□□□□□ -0.5
NDE1-203ENST00000570727 MNTQ99583 582 aa11.93□□□□□ -0.5
NDE1-203ENST00000570727 NKX3-1Q99801 234 aaPredicted RBP11.93□□□□□ -0.5
NDE1-203ENST00000570727 PKIBQ9C010 78 aa11.93□□□□□ -0.5
NDE1-203ENST00000570727 CLN6Q9NWW5 311 aa11.93□□□□□ -0.5
NDE1-203ENST00000570727 MTCH1Q9NZJ7 389 aa11.93□□□□□ -0.5
NDE1-203ENST00000570727 TCF19Q9Y242 345 aa11.93□□□□□ -0.5
NDE1-203ENST00000570727 SNX5Q9Y5X3 404 aa11.93□□□□□ -0.5
NDE1-203ENST00000570727 IGKV1-27A0A075B6S5 117 aa11.92□□□□□ -0.5
NDE1-203ENST00000570727 ZAR1LA6NP61 321 aa11.92□□□□□ -0.5
NDE1-203ENST00000570727 ZNF670-ZNF695F2Z2N8 137 aa11.92□□□□□ -0.5
NDE1-203ENST00000570727 GYG2O15488 501 aa11.92□□□□□ -0.5
NDE1-203ENST00000570727 ARG1P05089 322 aa11.92□□□□□ -0.5
NDE1-203ENST00000570727 CHRM2P08172 466 aa11.92□□□□□ -0.5
NDE1-203ENST00000570727 CD28P10747 220 aa11.92□□□□□ -0.5
NDE1-203ENST00000570727 UBE2V2Q15819 145 aa11.92□□□□□ -0.5
NDE1-203ENST00000570727 PLA1AQ53H76 456 aa11.92□□□□□ -0.5
NDE1-203ENST00000570727 SLX4IPQ5VYV7 408 aa11.92□□□□□ -0.5
NDE1-203ENST00000570727 C12orf73Q69YU5 71 aa11.92□□□□□ -0.5
NDE1-203ENST00000570727 DTX3Q8N9I9 347 aa11.92□□□□□ -0.5
NDE1-203ENST00000570727 OR11H6Q8NGC7 330 aa11.92□□□□□ -0.5
NDE1-203ENST00000570727 TRMT10AQ8TBZ6 339 aaKnown RBP11.92□□□□□ -0.5
NDE1-203ENST00000570727 TMEM163Q8TC26 289 aa11.92□□□□□ -0.5
NDE1-203ENST00000570727 CDCA4Q9BXL8 241 aa11.92□□□□□ -0.5
NDE1-203ENST00000570727 H2AFY2Q9P0M6 372 aaPredicted RBP11.92□□□□□ -0.5
NDE1-203ENST00000570727 TBL2Q9Y4P3 447 aaKnown RBP11.92□□□□□ -0.5
NDE1-203ENST00000570727 FAM230AA0A1W2PPH8 454 aa11.91□□□□□ -0.5
NDE1-203ENST00000570727 RPP14O95059 124 aaKnown RBP11.91□□□□□ -0.5
NDE1-203ENST00000570727 RBP4P02753 201 aa11.91□□□□□ -0.5
NDE1-203ENST00000570727 ZNF728P0DKX0 622 aa11.91□□□□□ -0.5
NDE1-203ENST00000570727 IGHV1-8P0DP01 117 aa11.91□□□□□ -0.5
NDE1-203ENST00000570727 FAM189A2Q15884 450 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms