RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 EIF4EP06730 217 aaKnown RBP13.04□□□□□ -0.32
HERPUD1-219ENST00000570273 RAB6AP20340 208 aa13.04□□□□□ -0.32
HERPUD1-219ENST00000570273 GATA4P43694 442 aa13.04□□□□□ -0.32
HERPUD1-219ENST00000570273 EFNB2P52799 333 aa13.04□□□□□ -0.32
HERPUD1-219ENST00000570273 ART1P52961 327 aa13.04□□□□□ -0.32
HERPUD1-219ENST00000570273 UNC119Q13432 240 aa13.04□□□□□ -0.32
HERPUD1-219ENST00000570273 WDR82Q6UXN9 313 aa13.04□□□□□ -0.32
HERPUD1-219ENST00000570273 C11orf53Q8IXP5 236 aa13.04□□□□□ -0.32
HERPUD1-219ENST00000570273 TMEM104Q8NE00 496 aa13.04□□□□□ -0.32
HERPUD1-219ENST00000570273 PCDHB16Q9NRJ7 776 aa13.04□□□□□ -0.32
HERPUD1-219ENST00000570273 MTCH1Q9NZJ7 389 aa13.04□□□□□ -0.32
HERPUD1-219ENST00000570273 FBLN5Q9UBX5 448 aa13.04□□□□□ -0.32
HERPUD1-219ENST00000570273 RAB22AQ9UL26 194 aa13.04□□□□□ -0.32
HERPUD1-219ENST00000570273 CELSR2Q9HCU4 2923 aa13.03□□□□□ -0.32
HERPUD1-219ENST00000570273 SETXQ7Z333 2677 aaKnown RBP13.03□□□□□ -0.32
HERPUD1-219ENST00000570273 APOA1P02647 267 aa13.03□□□□□ -0.32
HERPUD1-219ENST00000570273 SFTPBP07988 381 aa13.03□□□□□ -0.32
HERPUD1-219ENST00000570273 PGA5P0DJD9 388 aa13.03□□□□□ -0.32
HERPUD1-219ENST00000570273 MGMTP16455 207 aa13.03□□□□□ -0.32
HERPUD1-219ENST00000570273 ELK1P19419 428 aa13.03□□□□□ -0.32
HERPUD1-219ENST00000570273 NPBWR2P48146 333 aa13.03□□□□□ -0.32
HERPUD1-219ENST00000570273 GMFBP60983 142 aa13.03□□□□□ -0.32
HERPUD1-219ENST00000570273 LRRC28Q86X40 367 aaPredicted RBP13.03□□□□□ -0.32
HERPUD1-219ENST00000570273 ZNF295-AS1Q8N0V1 137 aa13.03□□□□□ -0.32
HERPUD1-219ENST00000570273 POC1AQ8NBT0 407 aa13.03□□□□□ -0.32
HERPUD1-219ENST00000570273 OR11L1Q8NGX0 322 aa13.03□□□□□ -0.32
HERPUD1-219ENST00000570273 LRRC29Q8WV35 223 aa13.03□□□□□ -0.32
HERPUD1-219ENST00000570273 EMG1Q92979 244 aaKnown RBP13.03□□□□□ -0.32
HERPUD1-219ENST00000570273 ERGIC1Q969X5 290 aa13.03□□□□□ -0.32
HERPUD1-219ENST00000570273 PTX4Q96A99 478 aa13.03□□□□□ -0.32
HERPUD1-219ENST00000570273 CMTM3Q96MX0 182 aa13.03□□□□□ -0.32
HERPUD1-219ENST00000570273 WDFY2Q96P53 400 aa13.03□□□□□ -0.32
HERPUD1-219ENST00000570273 RAB1BQ9H0U4 201 aa13.03□□□□□ -0.32
HERPUD1-219ENST00000570273 PLEKHF2Q9H8W4 249 aa13.03□□□□□ -0.32
HERPUD1-219ENST00000570273 RBFOX1Q9NWB1 397 aaKnown RBP13.03□□□□□ -0.32
HERPUD1-219ENST00000570273 AKR7A2O43488 359 aa13.02□□□□□ -0.33
HERPUD1-219ENST00000570273 GTF2F2P13984 249 aa13.02□□□□□ -0.33
HERPUD1-219ENST00000570273 TNFSF8P32971 234 aa13.02□□□□□ -0.33
HERPUD1-219ENST00000570273 PMELP40967 661 aa13.02□□□□□ -0.33
HERPUD1-219ENST00000570273 CNIH2Q6PI25 160 aa13.02□□□□□ -0.33
HERPUD1-219ENST00000570273 Q8IYB0 196 aa13.02□□□□□ -0.33
HERPUD1-219ENST00000570273 CMTM4Q8IZR5 234 aa13.02□□□□□ -0.33
HERPUD1-219ENST00000570273 OSR2Q8N2R0 312 aa13.02□□□□□ -0.33
HERPUD1-219ENST00000570273 OR10Z1Q8NGY1 313 aa13.02□□□□□ -0.33
HERPUD1-219ENST00000570273 C14orf79Q96F83 325 aa13.02□□□□□ -0.33
HERPUD1-219ENST00000570273 DIRAS2Q96HU8 199 aa13.02□□□□□ -0.33
HERPUD1-219ENST00000570273 TSC22D3Q99576 134 aa13.02□□□□□ -0.33
HERPUD1-219ENST00000570273 NRIP2Q9BQI9 281 aa13.02□□□□□ -0.33
HERPUD1-219ENST00000570273 URM1Q9BTM9 101 aaKnown RBP13.02□□□□□ -0.33
HERPUD1-219ENST00000570273 SELENOIQ9C0D9 397 aa13.02□□□□□ -0.33
HERPUD1-219ENST00000570273 ATG5Q9H1Y0 275 aa13.02□□□□□ -0.33
HERPUD1-219ENST00000570273 GCM1Q9NP62 436 aa13.02□□□□□ -0.33
HERPUD1-219ENST00000570273 PPP1R3CQ9UQK1 317 aa13.02□□□□□ -0.33
HERPUD1-219ENST00000570273 DCHS2Q6V1P9 2916 aa13.01□□□□□ -0.33
HERPUD1-219ENST00000570273 F8VVB4 439 aa13.01□□□□□ -0.33
HERPUD1-219ENST00000570273 F8VWA3 439 aa13.01□□□□□ -0.33
HERPUD1-219ENST00000570273 NXPH2O95156 264 aa13.01□□□□□ -0.33
HERPUD1-219ENST00000570273 HPXP02790 462 aa13.01□□□□□ -0.33
HERPUD1-219ENST00000570273 IRF2P14316 349 aa13.01□□□□□ -0.33
HERPUD1-219ENST00000570273 PRKACAP17612 351 aa13.01□□□□□ -0.33
HERPUD1-219ENST00000570273 TALDO1P37837 337 aa13.01□□□□□ -0.33
HERPUD1-219ENST00000570273 SNU13P55769 128 aaKnown RBP13.01□□□□□ -0.33
HERPUD1-219ENST00000570273 RPS27AP62979 156 aaKnown RBP13.01□□□□□ -0.33
HERPUD1-219ENST00000570273 LSAMPQ13449 338 aa13.01□□□□□ -0.33
HERPUD1-219ENST00000570273 ELP2Q6IA86 826 aa13.01□□□□□ -0.33
HERPUD1-219ENST00000570273 CDH24Q86UP0 819 aa13.01□□□□□ -0.33
HERPUD1-219ENST00000570273 BOLLQ8N9W6 283 aaKnown RBP13.01□□□□□ -0.33
HERPUD1-219ENST00000570273 OR51T1Q8NGJ9 327 aa13.01□□□□□ -0.33
HERPUD1-219ENST00000570273 Q8TCH9 128 aa13.01□□□□□ -0.33
HERPUD1-219ENST00000570273 RAB40AQ8WXH6 277 aa13.01□□□□□ -0.33
HERPUD1-219ENST00000570273 HPS1Q92902 700 aa13.01□□□□□ -0.33
HERPUD1-219ENST00000570273 PHF21AQ96BD5 680 aa13.01□□□□□ -0.33
HERPUD1-219ENST00000570273 ABCG5Q9H222 651 aa13.01□□□□□ -0.33
HERPUD1-219ENST00000570273 TREM2Q9NZC2 230 aa13.01□□□□□ -0.33
HERPUD1-219ENST00000570273 RNF7Q9UBF6 113 aa13.01□□□□□ -0.33
HERPUD1-219ENST00000570273 EXTL2Q9UBQ6 330 aa13.01□□□□□ -0.33
HERPUD1-219ENST00000570273 RAI1Q7Z5J4 1906 aaPredicted RBP13□□□□□ -0.33
HERPUD1-219ENST00000570273 METTL21EPA6NDL7 271 aa13□□□□□ -0.33
HERPUD1-219ENST00000570273 LRRC30A6NM36 301 aa13□□□□□ -0.33
HERPUD1-219ENST00000570273 C3orf80F5H4A9 247 aa13□□□□□ -0.33
HERPUD1-219ENST00000570273 H7C417 338 aa13□□□□□ -0.33
HERPUD1-219ENST00000570273 WNT9BO14905 357 aa13□□□□□ -0.33
HERPUD1-219ENST00000570273 NOS1APO75052 506 aaPredicted RBP13□□□□□ -0.33
HERPUD1-219ENST00000570273 EGR1P18146 543 aa13□□□□□ -0.33
HERPUD1-219ENST00000570273 CPT2P23786 658 aa13□□□□□ -0.33
HERPUD1-219ENST00000570273 SSTR2P30874 369 aa13□□□□□ -0.33
HERPUD1-219ENST00000570273 CDKN1AP38936 164 aa13□□□□□ -0.33
HERPUD1-219ENST00000570273 FGF12P61328 243 aa13□□□□□ -0.33
HERPUD1-219ENST00000570273 ERVK11-1P61568 191 aa13□□□□□ -0.33
HERPUD1-219ENST00000570273 MADCAM1Q13477 382 aa13□□□□□ -0.33
HERPUD1-219ENST00000570273 FAM189A2Q15884 450 aa13□□□□□ -0.33
HERPUD1-219ENST00000570273 PIGYQ3MUY2 71 aa13□□□□□ -0.33
HERPUD1-219ENST00000570273 FIP1L1Q6UN15 594 aaKnown RBP13□□□□□ -0.33
HERPUD1-219ENST00000570273 LINC00299Q6ZSB3 139 aa13□□□□□ -0.33
HERPUD1-219ENST00000570273 CCDC190Q86UF4 302 aa13□□□□□ -0.33
HERPUD1-219ENST00000570273 FAM58AQ8N1B3 248 aa13□□□□□ -0.33
HERPUD1-219ENST00000570273 DTX3Q8N9I9 347 aa13□□□□□ -0.33
HERPUD1-219ENST00000570273 OR4M1Q8NGD0 313 aa13□□□□□ -0.33
HERPUD1-219ENST00000570273 MARVELD3Q96A59 401 aa13□□□□□ -0.33
HERPUD1-219ENST00000570273 MRPS24Q96EL2 167 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms