RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 PFN4Q8NHR9 129 aa4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 ITFG2Q969R8 447 aa4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 EAF1Q96JC9 268 aaPredicted RBP4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 OR8B4Q96RC9 309 aa4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 OR52E6Q96RD3 313 aa4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 RTL8AQ9BWD3 113 aa4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 NDEL1Q9GZM8 345 aa4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 FN3KQ9H479 309 aa4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 CCDC134Q9H6E4 229 aa4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 PNRC2Q9NPJ4 139 aaKnown RBP4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 PCDHB16Q9NRJ7 776 aa4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 SLC2A8Q9NY64 477 aa4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 MEX3AA1L020 520 aaKnown RBP4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 PRSS37A4D1T9 235 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 IZUMO1RA6ND01 250 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 FAM90A10PA6NDY2 464 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 ZNF850A8MQ14 1090 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 OR11H12B2RN74 326 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 IGLL5B9A064 214 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 C5orf58C9J3I9 102 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 RFXANKO14593 260 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 XRCC2O43543 280 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 SPRY2O43597 315 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 PLIN3O60664 434 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 SLC16A7O60669 478 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 LGALS1P09382 135 aaKnown RBP4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 CD7P09564 240 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 CD34P28906 385 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 OTX1P32242 354 aaPredicted RBP4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 RBM34P42696 430 aaKnown RBP4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 GLIPR1P48060 266 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 FAM3AP98173 230 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 MEF2CQ06413 473 aaPredicted RBP4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 RAB40BQ12829 278 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 FADDQ13158 208 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 EBI3Q14213 229 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 HNF4GQ14541 408 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 RGNQ15493 299 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 HLA-DRB5Q30154 266 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 OR52W1Q6IF63 320 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 SLC18B1Q6NT16 456 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 DRAM2Q6UX65 266 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 IL34Q6ZMJ4 242 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 Q6ZWC4 215 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 OR6V1Q8N148 313 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 ANKRD42Q8N9B4 389 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 Q8N9W7 124 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 OR6T1Q8NGN1 323 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 ZNF671Q8TAW3 534 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 FRZBQ92765 325 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 SPTSSAQ969W0 71 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 PKNOX2Q96KN3 472 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 HRASLS5Q96KN8 279 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 MNTQ99583 582 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 TMEM109Q9BVC6 243 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 GGTLC1Q9BX51 225 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 WFDC10AQ9H1F0 79 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 EGLN3Q9H6Z9 239 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 ABCB9Q9NP78 766 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 ETAA1Q9NY74 926 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 ZIM2Q9NZV7 527 aa4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 MRM2Q9UI43 246 aaKnown RBP4.94□□□□□ -1.62
HERPUD1-217ENST00000569429 FAT4Q6V0I7 4981 aa4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 hCG_2014768A0A024R1R8 64 aa4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 hADV38S2A0JD32 116 aa4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 KRTAP29-1A8MX34 341 aaPredicted RBP4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 MPZL2O60487 215 aa4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 TRIM13O60858 407 aa4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 SERPINB7O75635 380 aa4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 MMP23AO75900 390 aa4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 IGKV1D-33P01593 117 aa4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 IGKV1-33P01594 117 aa4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 GPR4P46093 362 aa4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 NPBWR2P48146 333 aa4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 MECP2P51608 486 aaKnown RBP4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 EDDM3BP56851 147 aa4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 NANOS2P60321 138 aaKnown RBP4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 MAGOHP61326 146 aaKnown RBP4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 TNP2Q05952 138 aa4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 GALEQ14376 348 aa4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 MEP1BQ16820 701 aa4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 SMIM21Q3B7S5 101 aa4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 HSP90B2PQ58FF3 399 aa4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 MESTQ5EB52 335 aa4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 REEP3Q6NUK4 255 aa4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 CCDC80Q76M96 950 aa4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 SLC16A9Q7RTY1 509 aa4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 CSNK2A3Q8NEV1 391 aa4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 OR2K2Q8NGT1 345 aa4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 AGR3Q8TD06 166 aa4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 MZB1Q8WU39 189 aa4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 FBLIM1Q8WUP2 373 aa4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 OR5P3Q8WZ94 311 aa4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 VPS33AQ96AX1 596 aa4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 APOPT1Q96IL0 206 aa4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 RNF170Q96K19 258 aa4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 HSPB9Q9BQS6 159 aa4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 PAPOLGQ9BWT3 736 aaKnown RBP4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 FGF23Q9GZV9 251 aaPredicted RBP4.93□□□□□ -1.62
HERPUD1-217ENST00000569429 SYT4Q9H2B2 425 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms