RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 JAGN1Q8N5M9 183 aa14.02□□□□□ -0.17
COMMD4-224ENST00000568877 PNLDC1Q8NA58 520 aaKnown RBP14.02□□□□□ -0.17
COMMD4-224ENST00000568877 OR13F1Q8NGS4 319 aa14.02□□□□□ -0.17
COMMD4-224ENST00000568877 TNFAIP8L1Q8WVP5 186 aa14.02□□□□□ -0.17
COMMD4-224ENST00000568877 TMIGD2Q96BF3 282 aa14.02□□□□□ -0.17
COMMD4-224ENST00000568877 SEH1LQ96EE3 360 aa14.02□□□□□ -0.17
COMMD4-224ENST00000568877 NKX3-1Q99801 234 aaPredicted RBP14.02□□□□□ -0.17
COMMD4-224ENST00000568877 CHCHD6Q9BRQ6 235 aa14.02□□□□□ -0.17
COMMD4-224ENST00000568877 TMEM246Q9BRR3 403 aa14.02□□□□□ -0.17
COMMD4-224ENST00000568877 DNAJB11Q9UBS4 358 aa14.02□□□□□ -0.17
COMMD4-224ENST00000568877 GSTK1Q9Y2Q3 226 aa14.02□□□□□ -0.17
COMMD4-224ENST00000568877 TRAV1-2A0A0B4J238 106 aa14.01□□□□□ -0.17
COMMD4-224ENST00000568877 IGKV1-12A0A0C4DH73 117 aa14.01□□□□□ -0.17
COMMD4-224ENST00000568877 F8VVB4 439 aa14.01□□□□□ -0.17
COMMD4-224ENST00000568877 F8VWA3 439 aa14.01□□□□□ -0.17
COMMD4-224ENST00000568877 TRAPPC2LH3BP13 241 aa14.01□□□□□ -0.17
COMMD4-224ENST00000568877 NXPH2O95156 264 aa14.01□□□□□ -0.17
COMMD4-224ENST00000568877 IGKV1D-12P01611 117 aa14.01□□□□□ -0.17
COMMD4-224ENST00000568877 MYL9P24844 172 aa14.01□□□□□ -0.17
COMMD4-224ENST00000568877 PTGFRP43088 359 aa14.01□□□□□ -0.17
COMMD4-224ENST00000568877 OR3A4PP47883 348 aa14.01□□□□□ -0.17
COMMD4-224ENST00000568877 NPBWR2P48146 333 aa14.01□□□□□ -0.17
COMMD4-224ENST00000568877 ALDH3B2P48448 385 aa14.01□□□□□ -0.17
COMMD4-224ENST00000568877 TIMM50Q3ZCQ8 353 aa14.01□□□□□ -0.17
COMMD4-224ENST00000568877 GLT8D1Q68CQ7 371 aa14.01□□□□□ -0.17
COMMD4-224ENST00000568877 ACP7Q6ZNF0 438 aa14.01□□□□□ -0.17
COMMD4-224ENST00000568877 FAM90A1Q86YD7 464 aa14.01□□□□□ -0.17
COMMD4-224ENST00000568877 Q8IYB0 196 aa14.01□□□□□ -0.17
COMMD4-224ENST00000568877 MAPK1IP1LQ8NDC0 245 aa14.01□□□□□ -0.17
COMMD4-224ENST00000568877 PXT1Q8NFP0 134 aa14.01□□□□□ -0.17
COMMD4-224ENST00000568877 C12orf43Q96C57 262 aaKnown RBP14.01□□□□□ -0.17
COMMD4-224ENST00000568877 FOXRED1Q96CU9 486 aaPredicted RBP14.01□□□□□ -0.17
COMMD4-224ENST00000568877 FAM192AQ9GZU8 254 aa14.01□□□□□ -0.17
COMMD4-224ENST00000568877 HES4Q9HCC6 221 aa14.01□□□□□ -0.17
COMMD4-224ENST00000568877 SMURF1Q9HCE7 757 aa14.01□□□□□ -0.17
COMMD4-224ENST00000568877 NLKQ9UBE8 527 aa14.01□□□□□ -0.17
COMMD4-224ENST00000568877 MAP1AP78559 2803 aaPredicted RBP14.01□□□□□ -0.17
COMMD4-224ENST00000568877 LOC100506127A0A0U1RQW1 187 aa14□□□□□ -0.17
COMMD4-224ENST00000568877 CEACAM18A8MTB9 384 aa14□□□□□ -0.17
COMMD4-224ENST00000568877 TNFRSF13BO14836 293 aaPredicted RBP14□□□□□ -0.17
COMMD4-224ENST00000568877 NDUFA2O43678 99 aa14□□□□□ -0.17
COMMD4-224ENST00000568877 KDM4BO94953 1096 aa14□□□□□ -0.17
COMMD4-224ENST00000568877 GYPAP02724 150 aa14□□□□□ -0.17
COMMD4-224ENST00000568877 BCL3P20749 454 aa14□□□□□ -0.17
COMMD4-224ENST00000568877 LMO4P61968 165 aa14□□□□□ -0.17
COMMD4-224ENST00000568877 SMIM21Q3B7S5 101 aa14□□□□□ -0.17
COMMD4-224ENST00000568877 ASCL4Q6XD76 172 aa14□□□□□ -0.17
COMMD4-224ENST00000568877 GDPGP1Q6ZNW5 385 aa14□□□□□ -0.17
COMMD4-224ENST00000568877 DCDC5Q6ZRR9 648 aa14□□□□□ -0.17
COMMD4-224ENST00000568877 C1QL2Q7Z5L3 287 aa14□□□□□ -0.17
COMMD4-224ENST00000568877 OR5T2Q8NGG2 359 aa14□□□□□ -0.17
COMMD4-224ENST00000568877 COX4I2Q96KJ9 171 aa14□□□□□ -0.17
COMMD4-224ENST00000568877 UQCC2Q9BRT2 126 aa14□□□□□ -0.17
COMMD4-224ENST00000568877 ZNF665Q9H7R5 613 aa14□□□□□ -0.17
COMMD4-224ENST00000568877 CNTD2Q9H8S5 307 aa14□□□□□ -0.17
COMMD4-224ENST00000568877 PCDHB10Q9UN67 800 aa14□□□□□ -0.17
COMMD4-224ENST00000568877 AK6Q9Y3D8 172 aaKnown RBP14□□□□□ -0.17
COMMD4-224ENST00000568877 MYO9AB2RTY4 2548 aa14□□□□□ -0.17
COMMD4-224ENST00000568877 SHISA3A0PJX4 238 aa13.99□□□□□ -0.17
COMMD4-224ENST00000568877 OR2AT4A6NND4 320 aa13.99□□□□□ -0.17
COMMD4-224ENST00000568877 SMAD7O15105 426 aaKnown RBP13.99□□□□□ -0.17
COMMD4-224ENST00000568877 IGHV2-5P01817 119 aa13.99□□□□□ -0.17
COMMD4-224ENST00000568877 HEXAP06865 529 aa13.99□□□□□ -0.17
COMMD4-224ENST00000568877 CD37P11049 281 aa13.99□□□□□ -0.17
COMMD4-224ENST00000568877 IL2RGP31785 369 aa13.99□□□□□ -0.17
COMMD4-224ENST00000568877 STUMQ69YW2 141 aa13.99□□□□□ -0.17
COMMD4-224ENST00000568877 OR4D6Q8NGJ1 314 aa13.99□□□□□ -0.17
COMMD4-224ENST00000568877 ANGPTL6Q8NI99 470 aa13.99□□□□□ -0.17
COMMD4-224ENST00000568877 EMG1Q92979 244 aaKnown RBP13.99□□□□□ -0.17
COMMD4-224ENST00000568877 RAB39BQ96DA2 213 aa13.99□□□□□ -0.17
COMMD4-224ENST00000568877 KCTD7Q96MP8 289 aa13.99□□□□□ -0.17
COMMD4-224ENST00000568877 S100A13Q99584 98 aa13.99□□□□□ -0.17
COMMD4-224ENST00000568877 GFI1Q99684 422 aa13.99□□□□□ -0.17
COMMD4-224ENST00000568877 CENPOQ9BU64 300 aa13.99□□□□□ -0.17
COMMD4-224ENST00000568877 TMUB1Q9BVT8 246 aa13.99□□□□□ -0.17
COMMD4-224ENST00000568877 FUNDC2Q9BWH2 189 aa13.99□□□□□ -0.17
COMMD4-224ENST00000568877 ELL3Q9HB65 397 aaPredicted RBP13.99□□□□□ -0.17
COMMD4-224ENST00000568877 PATZ1Q9HBE1 687 aaKnown RBP13.99□□□□□ -0.17
COMMD4-224ENST00000568877 RHOFQ9HBH0 211 aa13.99□□□□□ -0.17
COMMD4-224ENST00000568877 RBFOX1Q9NWB1 397 aaKnown RBP13.99□□□□□ -0.17
COMMD4-224ENST00000568877 MIOXQ9UGB7 285 aa13.99□□□□□ -0.17
COMMD4-224ENST00000568877 SCOCQ9UIL1 159 aa13.99□□□□□ -0.17
COMMD4-224ENST00000568877 ING4Q9UNL4 249 aa13.99□□□□□ -0.17
COMMD4-224ENST00000568877 F5H0A9 414 aaPredicted RBP13.98□□□□□ -0.17
COMMD4-224ENST00000568877 PDCD5O14737 125 aa13.98□□□□□ -0.17
COMMD4-224ENST00000568877 AIREO43918 545 aa13.98□□□□□ -0.17
COMMD4-224ENST00000568877 CDRT1O95170 752 aa13.98□□□□□ -0.17
COMMD4-224ENST00000568877 KNG1P01042 644 aa13.98□□□□□ -0.17
COMMD4-224ENST00000568877 SFTPBP07988 381 aa13.98□□□□□ -0.17
COMMD4-224ENST00000568877 WNT2P09544 360 aa13.98□□□□□ -0.17
COMMD4-224ENST00000568877 PSG2P11465 335 aa13.98□□□□□ -0.17
COMMD4-224ENST00000568877 CD99P14209 185 aa13.98□□□□□ -0.17
COMMD4-224ENST00000568877 RPS2P15880 293 aaKnown RBP13.98□□□□□ -0.17
COMMD4-224ENST00000568877 CPT2P23786 658 aa13.98□□□□□ -0.17
COMMD4-224ENST00000568877 PSMD7P51665 324 aa13.98□□□□□ -0.17
COMMD4-224ENST00000568877 RSU1Q15404 277 aa13.98□□□□□ -0.17
COMMD4-224ENST00000568877 LYPD2Q6UXB3 125 aa13.98□□□□□ -0.17
COMMD4-224ENST00000568877 GPR141Q7Z602 305 aa13.98□□□□□ -0.17
COMMD4-224ENST00000568877 FAM58AQ8N1B3 248 aa13.98□□□□□ -0.17
COMMD4-224ENST00000568877 C18orf12Q96KH6 178 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms