RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 ARL6IP5O75915 188 aa15.04■□□□□ -0
COMMD4-222ENST00000568034 IGHV2-5P01817 119 aa15.04■□□□□ -0
COMMD4-222ENST00000568034 CD37P11049 281 aa15.04■□□□□ -0
COMMD4-222ENST00000568034 AMY2BP19961 511 aa15.04■□□□□ -0
COMMD4-222ENST00000568034 GLRA1P23415 457 aa15.04■□□□□ -0
COMMD4-222ENST00000568034 CALRP27797 417 aaKnown RBP15.04■□□□□ -0
COMMD4-222ENST00000568034 FGF9P31371 208 aaPredicted RBP15.04■□□□□ -0
COMMD4-222ENST00000568034 ZNF93P35789 620 aaPredicted RBP15.04■□□□□ -0
COMMD4-222ENST00000568034 OR3A4PP47883 348 aa15.04■□□□□ -0
COMMD4-222ENST00000568034 NPBWR2P48146 333 aa15.04■□□□□ -0
COMMD4-222ENST00000568034 ALDH3B2P48448 385 aa15.04■□□□□ -0
COMMD4-222ENST00000568034 STUMQ69YW2 141 aa15.04■□□□□ -0
COMMD4-222ENST00000568034 C22orf42Q6IC83 251 aa15.04■□□□□ -0
COMMD4-222ENST00000568034 ACP7Q6ZNF0 438 aa15.04■□□□□ -0
COMMD4-222ENST00000568034 MUC20Q8N307 709 aaPredicted RBP15.04■□□□□ -0
COMMD4-222ENST00000568034 ZSCAN4Q8NAM6 433 aaPredicted RBP15.04■□□□□ -0
COMMD4-222ENST00000568034 OR13F1Q8NGS4 319 aa15.04■□□□□ -0
COMMD4-222ENST00000568034 TMIGD2Q96BF3 282 aa15.04■□□□□ -0
COMMD4-222ENST00000568034 CEP19Q96LK0 163 aa15.04■□□□□ -0
COMMD4-222ENST00000568034 GAL3ST1Q99999 423 aa15.04■□□□□ -0
COMMD4-222ENST00000568034 TCF7L1Q9HCS4 588 aa15.04■□□□□ -0
COMMD4-222ENST00000568034 TXNL4BQ9NX01 149 aaKnown RBP15.04■□□□□ -0
COMMD4-222ENST00000568034 CELSR1Q9NYQ6 3014 aa15.04■□□□□ -0
COMMD4-222ENST00000568034 HIVEP1P15822 2718 aa15.03■□□□□ -0
COMMD4-222ENST00000568034 TRAV38-1A0A0B4J264 116 aa15.03■□□□□ -0
COMMD4-222ENST00000568034 MAGEB3O15480 346 aa15.03■□□□□ -0
COMMD4-222ENST00000568034 KDM4BO94953 1096 aa15.03■□□□□ -0
COMMD4-222ENST00000568034 BCL3P20749 454 aa15.03■□□□□ -0
COMMD4-222ENST00000568034 ASCL4Q6XD76 172 aa15.03■□□□□ -0
COMMD4-222ENST00000568034 SATL1Q86VE3 508 aa15.03■□□□□ -0
COMMD4-222ENST00000568034 CDH26Q8IXH8 852 aa15.03■□□□□ -0
COMMD4-222ENST00000568034 MKXQ8IYA7 352 aa15.03■□□□□ -0
COMMD4-222ENST00000568034 SAXO1Q8IYX7 474 aa15.03■□□□□ -0
COMMD4-222ENST00000568034 NKAIN3Q8N8D7 197 aa15.03■□□□□ -0
COMMD4-222ENST00000568034 C12orf43Q96C57 262 aaKnown RBP15.03■□□□□ -0
COMMD4-222ENST00000568034 C1orf159Q96HA4 380 aa15.03■□□□□ -0
COMMD4-222ENST00000568034 RBFOX1Q9NWB1 397 aaKnown RBP15.03■□□□□ -0
COMMD4-222ENST00000568034 RASL12Q9NYN1 266 aa15.03■□□□□ -0
COMMD4-222ENST00000568034 ZNF222Q9UK12 451 aa15.03■□□□□ -0
COMMD4-222ENST00000568034 F8P00451 2351 aa15.03■□□□□ -0
COMMD4-222ENST00000568034 MEGF11A6BM72 1044 aa15.02■□□□□ -0
COMMD4-222ENST00000568034 FCN3O75636 299 aa15.02■□□□□ -0
COMMD4-222ENST00000568034 GYPAP02724 150 aa15.02■□□□□ -0
COMMD4-222ENST00000568034 TFF1P04155 84 aa15.02■□□□□ -0
COMMD4-222ENST00000568034 SFTPBP07988 381 aa15.02■□□□□ -0
COMMD4-222ENST00000568034 MUC1P15941 1255 aaPredicted RBP15.02■□□□□ -0
COMMD4-222ENST00000568034 KRTAP1-1Q07627 177 aa15.02■□□□□ -0
COMMD4-222ENST00000568034 LYPD2Q6UXB3 125 aa15.02■□□□□ -0
COMMD4-222ENST00000568034 DCDC5Q6ZRR9 648 aa15.02■□□□□ -0
COMMD4-222ENST00000568034 SPICQ8N5J4 248 aa15.02■□□□□ -0
COMMD4-222ENST00000568034 PXT1Q8NFP0 134 aa15.02■□□□□ -0
COMMD4-222ENST00000568034 OR51F2Q8NH61 342 aa15.02■□□□□ -0
COMMD4-222ENST00000568034 ANGPTL6Q8NI99 470 aa15.02■□□□□ -0
COMMD4-222ENST00000568034 TNFAIP8L1Q8WVP5 186 aa15.02■□□□□ -0
COMMD4-222ENST00000568034 CPNE2Q96FN4 548 aaPredicted RBP15.02■□□□□ -0
COMMD4-222ENST00000568034 GPER1Q99527 375 aa15.02■□□□□ -0
COMMD4-222ENST00000568034 CHCHD6Q9BRQ6 235 aa15.02■□□□□ -0
COMMD4-222ENST00000568034 RNF167Q9H6Y7 350 aa15.02■□□□□ -0
COMMD4-222ENST00000568034 ZNF665Q9H7R5 613 aa15.02■□□□□ -0
COMMD4-222ENST00000568034 CNTD2Q9H8S5 307 aa15.02■□□□□ -0
COMMD4-222ENST00000568034 PATZ1Q9HBE1 687 aaKnown RBP15.02■□□□□ -0
COMMD4-222ENST00000568034 SMURF1Q9HCE7 757 aa15.02■□□□□ -0
COMMD4-222ENST00000568034 EXOSC4Q9NPD3 245 aaKnown RBP15.02■□□□□ -0
COMMD4-222ENST00000568034 SNTG1Q9NSN8 517 aa15.02■□□□□ -0
COMMD4-222ENST00000568034 NLKQ9UBE8 527 aa15.02■□□□□ -0
COMMD4-222ENST00000568034 IL36RNQ9UBH0 155 aa15.02■□□□□ -0
COMMD4-222ENST00000568034 CTSZQ9UBR2 303 aa15.02■□□□□ -0
COMMD4-222ENST00000568034 IGKV1D-17A0A075B6S4 117 aa15.01□□□□□ -0.01
COMMD4-222ENST00000568034 TRAV1-2A0A0B4J238 106 aa15.01□□□□□ -0.01
COMMD4-222ENST00000568034 A0A1B0GW55 424 aa15.01□□□□□ -0.01
COMMD4-222ENST00000568034 FAM157AC9JC47 383 aa15.01□□□□□ -0.01
COMMD4-222ENST00000568034 SMAD7O15105 426 aaKnown RBP15.01□□□□□ -0.01
COMMD4-222ENST00000568034 NXPH2O95156 264 aa15.01□□□□□ -0.01
COMMD4-222ENST00000568034 WNT2P09544 360 aa15.01□□□□□ -0.01
COMMD4-222ENST00000568034 DUX4L2P0CJ85 424 aa15.01□□□□□ -0.01
COMMD4-222ENST00000568034 DUX4L3P0CJ86 424 aa15.01□□□□□ -0.01
COMMD4-222ENST00000568034 DUX4L4P0CJ87 422 aa15.01□□□□□ -0.01
COMMD4-222ENST00000568034 DUX4L5P0CJ88 424 aa15.01□□□□□ -0.01
COMMD4-222ENST00000568034 DUX4L6P0CJ89 424 aa15.01□□□□□ -0.01
COMMD4-222ENST00000568034 DUX4L7P0CJ90 424 aa15.01□□□□□ -0.01
COMMD4-222ENST00000568034 TMEM225BP0DP42 221 aa15.01□□□□□ -0.01
COMMD4-222ENST00000568034 PSG2P11465 335 aa15.01□□□□□ -0.01
COMMD4-222ENST00000568034 PTGFRP43088 359 aa15.01□□□□□ -0.01
COMMD4-222ENST00000568034 MICBQ29980 383 aa15.01□□□□□ -0.01
COMMD4-222ENST00000568034 TMEM249Q2WGJ8 235 aa15.01□□□□□ -0.01
COMMD4-222ENST00000568034 DUX4L9Q6RFH8 374 aaPredicted RBP15.01□□□□□ -0.01
COMMD4-222ENST00000568034 JAGN1Q8N5M9 183 aa15.01□□□□□ -0.01
COMMD4-222ENST00000568034 OR5T2Q8NGG2 359 aa15.01□□□□□ -0.01
COMMD4-222ENST00000568034 OR4D6Q8NGJ1 314 aa15.01□□□□□ -0.01
COMMD4-222ENST00000568034 C1orf147Q96MC9 270 aaPredicted RBP15.01□□□□□ -0.01
COMMD4-222ENST00000568034 CENPOQ9BU64 300 aa15.01□□□□□ -0.01
COMMD4-222ENST00000568034 DNAJB11Q9UBS4 358 aa15.01□□□□□ -0.01
COMMD4-222ENST00000568034 DUX4Q9UBX2 424 aa15.01□□□□□ -0.01
COMMD4-222ENST00000568034 SSR3Q9UNL2 185 aa15.01□□□□□ -0.01
COMMD4-222ENST00000568034 CSPG4Q6UVK1 2322 aa15.01□□□□□ -0.01
COMMD4-222ENST00000568034 TRAPPC2LH3BP13 241 aa15□□□□□ -0.01
COMMD4-222ENST00000568034 CDRT1O95170 752 aa15□□□□□ -0.01
COMMD4-222ENST00000568034 IGHV4-31P0DP07 118 aa15□□□□□ -0.01
COMMD4-222ENST00000568034 SEC61A1P61619 476 aaKnown RBP15□□□□□ -0.01
COMMD4-222ENST00000568034 SMIM21Q3B7S5 101 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms