RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 IGFBP3P17936 291 aaPredicted RBP10.18□□□□□ -0.78
SF3B3-208ENST00000567250 PITPNBP48739 271 aa10.18□□□□□ -0.78
SF3B3-208ENST00000567250 GMFBP60983 142 aa10.18□□□□□ -0.78
SF3B3-208ENST00000567250 GNB2P62879 340 aa10.18□□□□□ -0.78
SF3B3-208ENST00000567250 HNRNPA0Q13151 305 aaKnown RBP10.18□□□□□ -0.78
SF3B3-208ENST00000567250 ACSM3Q53FZ2 586 aa10.18□□□□□ -0.78
SF3B3-208ENST00000567250 HSD17B12Q53GQ0 312 aa10.18□□□□□ -0.78
SF3B3-208ENST00000567250 STUMQ69YW2 141 aa10.18□□□□□ -0.78
SF3B3-208ENST00000567250 ACP7Q6ZNF0 438 aa10.18□□□□□ -0.78
SF3B3-208ENST00000567250 ANGPTL5Q86XS5 388 aa10.18□□□□□ -0.78
SF3B3-208ENST00000567250 SAXO1Q8IYX7 474 aa10.18□□□□□ -0.78
SF3B3-208ENST00000567250 C19orf18Q8NEA5 215 aa10.18□□□□□ -0.78
SF3B3-208ENST00000567250 TSPAN14Q8NG11 270 aa10.18□□□□□ -0.78
SF3B3-208ENST00000567250 OR51A2Q8NGJ7 313 aa10.18□□□□□ -0.78
SF3B3-208ENST00000567250 SLAMF9Q96A28 289 aa10.18□□□□□ -0.78
SF3B3-208ENST00000567250 S100A13Q99584 98 aa10.18□□□□□ -0.78
SF3B3-208ENST00000567250 NRIP2Q9BQI9 281 aa10.18□□□□□ -0.78
SF3B3-208ENST00000567250 SSBP3Q9BWW4 388 aaPredicted RBP10.18□□□□□ -0.78
SF3B3-208ENST00000567250 WDR13Q9H1Z4 485 aa10.18□□□□□ -0.78
SF3B3-208ENST00000567250 ZNF696Q9H7X3 374 aa10.18□□□□□ -0.78
SF3B3-208ENST00000567250 TCF7L1Q9HCS4 588 aa10.18□□□□□ -0.78
SF3B3-208ENST00000567250 KAAG1Q9UBP8 84 aa10.18□□□□□ -0.78
SF3B3-208ENST00000567250 CLN8Q9UBY8 286 aa10.18□□□□□ -0.78
SF3B3-208ENST00000567250 OR5V1Q9UGF6 321 aa10.18□□□□□ -0.78
SF3B3-208ENST00000567250 KCNS2Q9ULS6 477 aa10.18□□□□□ -0.78
SF3B3-208ENST00000567250 ZNF469Q96JG9 3925 aaPredicted RBP10.17□□□□□ -0.78
SF3B3-208ENST00000567250 IGHV3OR15-7A0A075B7D8 119 aa10.17□□□□□ -0.78
SF3B3-208ENST00000567250 TRAV20A0A0B4J274 112 aa10.17□□□□□ -0.78
SF3B3-208ENST00000567250 MEGF11A6BM72 1044 aa10.17□□□□□ -0.78
SF3B3-208ENST00000567250 OR2AT4A6NND4 320 aa10.17□□□□□ -0.78
SF3B3-208ENST00000567250 FAM157AC9JC47 383 aa10.17□□□□□ -0.78
SF3B3-208ENST00000567250 TMPRSS2O15393 492 aa10.17□□□□□ -0.78
SF3B3-208ENST00000567250 GYPAP02724 150 aa10.17□□□□□ -0.78
SF3B3-208ENST00000567250 GALP22466 123 aa10.17□□□□□ -0.78
SF3B3-208ENST00000567250 ZNF93P35789 620 aaPredicted RBP10.17□□□□□ -0.78
SF3B3-208ENST00000567250 TGFBR2P37173 567 aa10.17□□□□□ -0.78
SF3B3-208ENST00000567250 RBMXP38159 391 aaKnown RBP10.17□□□□□ -0.78
SF3B3-208ENST00000567250 BMXP51813 675 aa10.17□□□□□ -0.78
SF3B3-208ENST00000567250 DVL1P1P54792 670 aaPredicted RBP10.17□□□□□ -0.78
SF3B3-208ENST00000567250 RPS25P62851 125 aaKnown RBP10.17□□□□□ -0.78
SF3B3-208ENST00000567250 PDZK1IP1Q13113 114 aa10.17□□□□□ -0.78
SF3B3-208ENST00000567250 SATL1Q86VE3 508 aa10.17□□□□□ -0.78
SF3B3-208ENST00000567250 CDH26Q8IXH8 852 aa10.17□□□□□ -0.78
SF3B3-208ENST00000567250 ZSCAN4Q8NAM6 433 aaPredicted RBP10.17□□□□□ -0.78
SF3B3-208ENST00000567250 OR5D18Q8NGL1 313 aa10.17□□□□□ -0.78
SF3B3-208ENST00000567250 EMG1Q92979 244 aaKnown RBP10.17□□□□□ -0.78
SF3B3-208ENST00000567250 TMEM203Q969S6 136 aa10.17□□□□□ -0.78
SF3B3-208ENST00000567250 RFT1Q96AA3 541 aa10.17□□□□□ -0.78
SF3B3-208ENST00000567250 MSI2Q96DH6 328 aaKnown RBP10.17□□□□□ -0.78
SF3B3-208ENST00000567250 SPACA5Q96QH8 159 aa10.17□□□□□ -0.78
SF3B3-208ENST00000567250 NR1H4Q96RI1 486 aaPredicted RBP10.17□□□□□ -0.78
SF3B3-208ENST00000567250 FAM192AQ9GZU8 254 aa10.17□□□□□ -0.78
SF3B3-208ENST00000567250 HES4Q9HCC6 221 aa10.17□□□□□ -0.78
SF3B3-208ENST00000567250 NOX4Q9NPH5 578 aa10.17□□□□□ -0.78
SF3B3-208ENST00000567250 DOCK11Q5JSL3 2073 aa10.16□□□□□ -0.78
SF3B3-208ENST00000567250 TRAV8-7A0A075B6U6 113 aa10.16□□□□□ -0.78
SF3B3-208ENST00000567250 A0A1W2PPK0 400 aa10.16□□□□□ -0.78
SF3B3-208ENST00000567250 GABRPO00591 440 aa10.16□□□□□ -0.78
SF3B3-208ENST00000567250 SPRY1O43609 319 aaPredicted RBP10.16□□□□□ -0.78
SF3B3-208ENST00000567250 LY6G6DO95868 133 aa10.16□□□□□ -0.78
SF3B3-208ENST00000567250 KNG1P01042 644 aa10.16□□□□□ -0.78
SF3B3-208ENST00000567250 TGFAP01135 160 aa10.16□□□□□ -0.78
SF3B3-208ENST00000567250 MAS1P04201 325 aa10.16□□□□□ -0.78
SF3B3-208ENST00000567250 WNT2P09544 360 aa10.16□□□□□ -0.78
SF3B3-208ENST00000567250 UCHL1P09936 223 aa10.16□□□□□ -0.78
SF3B3-208ENST00000567250 TMEM225BP0DP42 221 aa10.16□□□□□ -0.78
SF3B3-208ENST00000567250 GATA3P23771 443 aa10.16□□□□□ -0.78
SF3B3-208ENST00000567250 ERVK11-1P61568 191 aa10.16□□□□□ -0.78
SF3B3-208ENST00000567250 IL13RA1P78552 427 aa10.16□□□□□ -0.78
SF3B3-208ENST00000567250 KRTAP1-1Q07627 177 aa10.16□□□□□ -0.78
SF3B3-208ENST00000567250 NEDD8Q15843 81 aa10.16□□□□□ -0.78
SF3B3-208ENST00000567250 SSX1Q16384 188 aa10.16□□□□□ -0.78
SF3B3-208ENST00000567250 C11orf91Q3C1V1 193 aa10.16□□□□□ -0.78
SF3B3-208ENST00000567250 LRRC10Q5BKY1 277 aa10.16□□□□□ -0.78
SF3B3-208ENST00000567250 SPIN3Q5JUX0 258 aa10.16□□□□□ -0.78
SF3B3-208ENST00000567250 ASPHD2Q6ICH7 369 aa10.16□□□□□ -0.78
SF3B3-208ENST00000567250 UNQ9370/PRO34162Q6UXP9 181 aa10.16□□□□□ -0.78
SF3B3-208ENST00000567250 CEACAM19Q7Z692 300 aa10.16□□□□□ -0.78
SF3B3-208ENST00000567250 PXT1Q8NFP0 134 aa10.16□□□□□ -0.78
SF3B3-208ENST00000567250 OR52N4Q8NGI2 321 aa10.16□□□□□ -0.78
SF3B3-208ENST00000567250 TNFAIP8L1Q8WVP5 186 aa10.16□□□□□ -0.78
SF3B3-208ENST00000567250 TMEM186Q96B77 213 aa10.16□□□□□ -0.78
SF3B3-208ENST00000567250 MED30Q96HR3 178 aa10.16□□□□□ -0.78
SF3B3-208ENST00000567250 PCDHB16Q9NRJ7 776 aa10.16□□□□□ -0.78
SF3B3-208ENST00000567250 SNTG1Q9NSN8 517 aa10.16□□□□□ -0.78
SF3B3-208ENST00000567250 MTCH1Q9NZJ7 389 aa10.16□□□□□ -0.78
SF3B3-208ENST00000567250 GLS2Q9UI32 602 aa10.16□□□□□ -0.78
SF3B3-208ENST00000567250 NSD1Q96L73 2696 aaPredicted RBP10.15□□□□□ -0.78
SF3B3-208ENST00000567250 PPIAL4CA0A0B4J2A2 164 aa10.15□□□□□ -0.78
SF3B3-208ENST00000567250 A0A0G2JMP0 313 aa10.15□□□□□ -0.78
SF3B3-208ENST00000567250 A0A0X1KG70 313 aa10.15□□□□□ -0.78
SF3B3-208ENST00000567250 A8MV72 311 aaPredicted RBP10.15□□□□□ -0.78
SF3B3-208ENST00000567250 NDUFB3O43676 98 aa10.15□□□□□ -0.78
SF3B3-208ENST00000567250 ZNF780AO75290 641 aaPredicted RBP10.15□□□□□ -0.78
SF3B3-208ENST00000567250 KDM4BO94953 1096 aa10.15□□□□□ -0.78
SF3B3-208ENST00000567250 MYL9P24844 172 aa10.15□□□□□ -0.78
SF3B3-208ENST00000567250 RANBP1P43487 201 aa10.15□□□□□ -0.78
SF3B3-208ENST00000567250 GABRA2P47869 451 aa10.15□□□□□ -0.78
SF3B3-208ENST00000567250 MTNR1BP49286 362 aa10.15□□□□□ -0.78
SF3B3-208ENST00000567250 ZP1P60852 638 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms