RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-215ENST00000566682 DUX4L2P0CJ85 424 aa11.38□□□□□ -0.59
SPG7-215ENST00000566682 DUX4L3P0CJ86 424 aa11.38□□□□□ -0.59
SPG7-215ENST00000566682 DUX4L4P0CJ87 422 aa11.38□□□□□ -0.59
SPG7-215ENST00000566682 DUX4L5P0CJ88 424 aa11.38□□□□□ -0.59
SPG7-215ENST00000566682 DUX4L6P0CJ89 424 aa11.38□□□□□ -0.59
SPG7-215ENST00000566682 DUX4L7P0CJ90 424 aa11.38□□□□□ -0.59
SPG7-215ENST00000566682 CELP19835 753 aa11.38□□□□□ -0.59
SPG7-215ENST00000566682 GATA3P23771 443 aa11.38□□□□□ -0.59
SPG7-215ENST00000566682 MTCP1P56278 107 aa11.38□□□□□ -0.59
SPG7-215ENST00000566682 PAX2Q02962 417 aa11.38□□□□□ -0.59
SPG7-215ENST00000566682 IRF3Q14653 427 aa11.38□□□□□ -0.59
SPG7-215ENST00000566682 RBM48Q5RL73 367 aaKnown RBP11.38□□□□□ -0.59
SPG7-215ENST00000566682 ATPAF1Q5TC12 328 aaPredicted RBP11.38□□□□□ -0.59
SPG7-215ENST00000566682 DUX4L9Q6RFH8 374 aaPredicted RBP11.38□□□□□ -0.59
SPG7-215ENST00000566682 LHFPL2Q6ZUX7 228 aa11.38□□□□□ -0.59
SPG7-215ENST00000566682 SLC36A1Q7Z2H8 476 aa11.38□□□□□ -0.59
SPG7-215ENST00000566682 BATF2Q8N1L9 274 aa11.38□□□□□ -0.59
SPG7-215ENST00000566682 OR13C5Q8NGS8 318 aa11.38□□□□□ -0.59
SPG7-215ENST00000566682 ANGPTL6Q8NI99 470 aa11.38□□□□□ -0.59
SPG7-215ENST00000566682 TMEM106AQ96A25 262 aa11.38□□□□□ -0.59
SPG7-215ENST00000566682 SPSB1Q96BD6 273 aa11.38□□□□□ -0.59
SPG7-215ENST00000566682 POM121Q96HA1 1249 aa11.38□□□□□ -0.59
SPG7-215ENST00000566682 OR5M11Q96RB7 305 aa11.38□□□□□ -0.59
SPG7-215ENST00000566682 C7orf69Q9H7B7 122 aa11.38□□□□□ -0.59
SPG7-215ENST00000566682 SMURF1Q9HCE7 757 aa11.38□□□□□ -0.59
SPG7-215ENST00000566682 MTCH1Q9NZJ7 389 aa11.38□□□□□ -0.59
SPG7-215ENST00000566682 DUX4Q9UBX2 424 aa11.38□□□□□ -0.59
SPG7-215ENST00000566682 OR5V1Q9UGF6 321 aa11.38□□□□□ -0.59
SPG7-215ENST00000566682 INSIG2Q9Y5U4 225 aa11.38□□□□□ -0.59
SPG7-215ENST00000566682 SETD2Q9BYW2 2564 aaPredicted RBP11.38□□□□□ -0.59
SPG7-215ENST00000566682 ZFHX3Q15911 3703 aa11.37□□□□□ -0.59
SPG7-215ENST00000566682 J3QLI3 93 aa11.37□□□□□ -0.59
SPG7-215ENST00000566682 SULT1B1O43704 296 aa11.37□□□□□ -0.59
SPG7-215ENST00000566682 INMTO95050 263 aa11.37□□□□□ -0.59
SPG7-215ENST00000566682 ALX3O95076 343 aa11.37□□□□□ -0.59
SPG7-215ENST00000566682 NXPH2O95156 264 aa11.37□□□□□ -0.59
SPG7-215ENST00000566682 CD2P06729 351 aa11.37□□□□□ -0.59
SPG7-215ENST00000566682 PSG2P11465 335 aa11.37□□□□□ -0.59
SPG7-215ENST00000566682 GABRA2P47869 451 aa11.37□□□□□ -0.59
SPG7-215ENST00000566682 ERVK11-1P61568 191 aa11.37□□□□□ -0.59
SPG7-215ENST00000566682 RPS11P62280 158 aaKnown RBP eCLIP11.37□□□□□ -0.59
SPG7-215ENST00000566682 BDH1Q02338 343 aa11.37□□□□□ -0.59
SPG7-215ENST00000566682 ACSM1Q08AH1 577 aa11.37□□□□□ -0.59
SPG7-215ENST00000566682 SPHARQ15513 63 aa11.37□□□□□ -0.59
SPG7-215ENST00000566682 MED22Q15528 200 aa11.37□□□□□ -0.59
SPG7-215ENST00000566682 YIF1BQ5BJH7 314 aa11.37□□□□□ -0.59
SPG7-215ENST00000566682 ASPHD2Q6ICH7 369 aa11.37□□□□□ -0.59
SPG7-215ENST00000566682 ZNF788Q6ZQV5 615 aa11.37□□□□□ -0.59
SPG7-215ENST00000566682 C1orf229Q6ZS94 237 aaPredicted RBP11.37□□□□□ -0.59
SPG7-215ENST00000566682 SLC25A26Q70HW3 274 aa11.37□□□□□ -0.59
SPG7-215ENST00000566682 RNF144BQ7Z419 303 aa11.37□□□□□ -0.59
SPG7-215ENST00000566682 RAB40AQ8WXH6 277 aa11.37□□□□□ -0.59
SPG7-215ENST00000566682 SLAMF9Q96A28 289 aa11.37□□□□□ -0.59
SPG7-215ENST00000566682 RFT1Q96AA3 541 aa11.37□□□□□ -0.59
SPG7-215ENST00000566682 SPACA5Q96QH8 159 aa11.37□□□□□ -0.59
SPG7-215ENST00000566682 NRIP2Q9BQI9 281 aa11.37□□□□□ -0.59
SPG7-215ENST00000566682 CCDC90BQ9GZT6 254 aa11.37□□□□□ -0.59
SPG7-215ENST00000566682 DNTTIP1Q9H147 329 aa11.37□□□□□ -0.59
SPG7-215ENST00000566682 Q9H521 79 aa11.37□□□□□ -0.59
SPG7-215ENST00000566682 NEK6Q9HC98 313 aa11.37□□□□□ -0.59
SPG7-215ENST00000566682 HES4Q9HCC6 221 aa11.37□□□□□ -0.59
SPG7-215ENST00000566682 LSM2Q9Y333 95 aaKnown RBP11.37□□□□□ -0.59
SPG7-215ENST00000566682 IGKV1D-17A0A075B6S4 117 aa11.36□□□□□ -0.59
SPG7-215ENST00000566682 LOC105371242A0A075B767 164 aa11.36□□□□□ -0.59
SPG7-215ENST00000566682 TRBV5-5A0A0J9YX44 114 aa11.36□□□□□ -0.59
SPG7-215ENST00000566682 F8VVB4 439 aa11.36□□□□□ -0.59
SPG7-215ENST00000566682 F8VWA3 439 aa11.36□□□□□ -0.59
SPG7-215ENST00000566682 SPRY1O43609 319 aaPredicted RBP11.36□□□□□ -0.59
SPG7-215ENST00000566682 NDUFB3O43676 98 aa11.36□□□□□ -0.59
SPG7-215ENST00000566682 CD1AP06126 327 aa11.36□□□□□ -0.59
SPG7-215ENST00000566682 HCKP08631 526 aa11.36□□□□□ -0.59
SPG7-215ENST00000566682 FAM157CP0CG43 387 aa11.36□□□□□ -0.59
SPG7-215ENST00000566682 SRD5A1P18405 259 aa11.36□□□□□ -0.59
SPG7-215ENST00000566682 RAB3AP20336 220 aa11.36□□□□□ -0.59
SPG7-215ENST00000566682 POU3F4P49335 361 aa11.36□□□□□ -0.59
SPG7-215ENST00000566682 IKZF1Q13422 519 aa11.36□□□□□ -0.59
SPG7-215ENST00000566682 SMIM21Q3B7S5 101 aa11.36□□□□□ -0.59
SPG7-215ENST00000566682 Q499Y3 187 aa11.36□□□□□ -0.59
SPG7-215ENST00000566682 CD276Q5ZPR3 534 aa11.36□□□□□ -0.59
SPG7-215ENST00000566682 ZNF529Q6P280 563 aa11.36□□□□□ -0.59
SPG7-215ENST00000566682 CRIP3Q6Q6R5 217 aa11.36□□□□□ -0.59
SPG7-215ENST00000566682 PRSS48Q7RTY5 328 aa11.36□□□□□ -0.59
SPG7-215ENST00000566682 MKXQ8IYA7 352 aa11.36□□□□□ -0.59
SPG7-215ENST00000566682 FGFRL1Q8N441 504 aa11.36□□□□□ -0.59
SPG7-215ENST00000566682 FAM216BQ8N7L0 139 aa11.36□□□□□ -0.59
SPG7-215ENST00000566682 OR51A2Q8NGJ7 313 aa11.36□□□□□ -0.59
SPG7-215ENST00000566682 ST8SIA4Q92187 359 aa11.36□□□□□ -0.59
SPG7-215ENST00000566682 DACT3Q96B18 629 aaPredicted RBP11.36□□□□□ -0.59
SPG7-215ENST00000566682 ORAI1Q96D31 301 aa11.36□□□□□ -0.59
SPG7-215ENST00000566682 MED30Q96HR3 178 aa11.36□□□□□ -0.59
SPG7-215ENST00000566682 CEP19Q96LK0 163 aa11.36□□□□□ -0.59
SPG7-215ENST00000566682 GAFA1Q96PS6 74 aa11.36□□□□□ -0.59
SPG7-215ENST00000566682 NUDT16L1Q9BRJ7 211 aaKnown RBP11.36□□□□□ -0.59
SPG7-215ENST00000566682 TAS2R4Q9NYW5 299 aa11.36□□□□□ -0.59
SPG7-215ENST00000566682 ZNF222Q9UK12 451 aa11.36□□□□□ -0.59
SPG7-215ENST00000566682 BLOC1S6Q9UL45 172 aa11.36□□□□□ -0.59
SPG7-215ENST00000566682 SVEP1Q4LDE5 3571 aa11.36□□□□□ -0.59
SPG7-215ENST00000566682 C2CD3Q4AC94 2353 aa11.35□□□□□ -0.59
SPG7-215ENST00000566682 NIPBLQ6KC79 2804 aaeCLIP11.35□□□□□ -0.59
SPG7-215ENST00000566682 IGHV2-70DA0A0C4DH43 119 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms