RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 PKD1L3Q7Z443 1732 aa4.58□□□□□ -1.68
SMG1-211ENST00000565324 TMEM33P57088 247 aa4.58□□□□□ -1.68
SMG1-211ENST00000565324 MPV17LQ2QL34 196 aa4.58□□□□□ -1.68
SMG1-211ENST00000565324 NKAIN1Q4KMZ8 207 aa4.58□□□□□ -1.68
SMG1-211ENST00000565324 FAM78BQ5VT40 261 aa4.58□□□□□ -1.68
SMG1-211ENST00000565324 MAVSQ7Z434 540 aa4.58□□□□□ -1.68
SMG1-211ENST00000565324 MRGPRGQ86SM5 289 aa4.58□□□□□ -1.68
SMG1-211ENST00000565324 ZADH2Q8N4Q0 377 aa4.58□□□□□ -1.68
SMG1-211ENST00000565324 GAL3ST2Q9H3Q3 398 aa4.58□□□□□ -1.68
SMG1-211ENST00000565324 TOPAZ1Q8N9V7 1692 aa4.58□□□□□ -1.68
SMG1-211ENST00000565324 ZNF253O75346 499 aa4.58□□□□□ -1.68
SMG1-211ENST00000565324 OR2J2O76002 312 aa4.58□□□□□ -1.68
SMG1-211ENST00000565324 HLA-DQA1P01909 254 aa4.58□□□□□ -1.68
SMG1-211ENST00000565324 IQCF3P0C7M6 154 aa4.58□□□□□ -1.68
SMG1-211ENST00000565324 P2RY1P47900 373 aa4.58□□□□□ -1.68
SMG1-211ENST00000565324 Q56UQ5 140 aa4.58□□□□□ -1.68
SMG1-211ENST00000565324 PARM1Q6UWI2 310 aa4.58□□□□□ -1.68
SMG1-211ENST00000565324 NHLRC1Q6VVB1 395 aa4.58□□□□□ -1.68
SMG1-211ENST00000565324 TSPAN13O95857 204 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 CRYAAP02489 173 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 SLC16A11Q8NCK7 471 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 IER2Q9BTL4 223 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 KLF16Q9BXK1 252 aaPredicted RBP4.57□□□□□ -1.68
SMG1-211ENST00000565324 PKIBQ9C010 78 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 PLSCR3Q9NRY6 295 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 CA10Q9NS85 328 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 OR6C3Q9NZP0 311 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 H3BNC9 293 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 PLPP2O43688 288 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 CRHP06850 196 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 TIAL1Q01085 375 aaKnown RBP eCLIP4.57□□□□□ -1.686e-7■□□□□ 9.7
SMG1-211ENST00000565324 TMEM136Q6ZRR5 245 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 H1FOOQ8IZA3 346 aaPredicted RBP4.57□□□□□ -1.68
SMG1-211ENST00000565324 FAM169BQ8N8A8 192 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 RDH5Q92781 318 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 IL17BQ9UHF5 180 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 SFT2D2O95562 160 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 SNAI1O95863 264 aaPredicted RBP4.57□□□□□ -1.68
SMG1-211ENST00000565324 CEACAM6P40199 344 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 AWAT1Q58HT5 328 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 AFMIDQ63HM1 303 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 TBC1D26Q86UD7 250 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 C5orf17Q8NAS9 161 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 TBX15Q96SF7 602 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 TRAF4Q9BUZ4 470 aaPredicted RBP4.57□□□□□ -1.68
SMG1-211ENST00000565324 USP3Q9Y6I4 520 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 IFITM10A6NMD0 228 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 ZNF749O43361 778 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 AKR7A3O95154 331 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 NPPBP16860 134 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 TNFRSF1AP19438 455 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 PSMB5P28074 263 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 CCR2P41597 374 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 PPICP45877 212 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 SOX4Q06945 474 aaPredicted RBP4.57□□□□□ -1.68
SMG1-211ENST00000565324 PSMG4Q5JS54 123 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 HES3Q5TGS1 186 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 METRNLQ641Q3 311 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 TMEM215Q68D42 235 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 IGKV6-21A0A0C4DH24 114 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 OR4C46A6NHA9 309 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 HIST1H1DP16402 221 aaKnown RBP4.57□□□□□ -1.68
SMG1-211ENST00000565324 FNDC7Q5VTL7 733 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 OIT3Q8WWZ8 545 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 UBE2FQ969M7 185 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 ZC3HAV1LQ96H79 300 aaKnown RBP4.57□□□□□ -1.68
SMG1-211ENST00000565324 ZNF385DQ9H6B1 395 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 TMEM38BQ9NVV0 291 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 IL36GQ9NZH8 169 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 KLF13Q9Y2Y9 288 aaPredicted RBP4.57□□□□□ -1.68
SMG1-211ENST00000565324 CICQ96RK0 1608 aaPredicted RBP4.57□□□□□ -1.68
SMG1-211ENST00000565324 SSC5DA1L4H1 1573 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 PTGESO14684 152 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 CA3P07451 260 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 ZNF865P0CJ78 1059 aaPredicted RBP4.57□□□□□ -1.68
SMG1-211ENST00000565324 LBX1P52954 281 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 ZNF141Q15928 474 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 MAMSTRQ6ZN01 415 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 OR5R1Q8NH85 324 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 SLC46A2Q9BY10 475 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 SLC25A22Q9H936 323 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 PARP11Q9NR21 331 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 C3orf85A0A1B0GTC6 90 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 ZC3H12DA2A288 527 aaKnown RBP4.57□□□□□ -1.68
SMG1-211ENST00000565324 CXorf65A6NEN9 183 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 OR2W5A6NFC9 320 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 M0R296 226 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 ERV3-1Q14264 604 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 ACSM6Q6P461 480 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 OR4S2Q8NH73 311 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 TWSG1Q9GZX9 223 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 RNF167Q9H6Y7 350 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 NAGKQ9UJ70 344 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 HBZP02008 142 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 RBPMS2Q6ZRY4 209 aaKnown RBP4.57□□□□□ -1.68
SMG1-211ENST00000565324 RNF165Q6ZSG1 346 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 SLC25A26Q70HW3 274 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 TAS1R1Q7RTX1 841 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 TGIF2LXQ8IUE1 241 aa4.57□□□□□ -1.68
SMG1-211ENST00000565324 PARD6GQ9BYG4 376 aaPredicted RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms