RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 DTYMKP23919 212 aa6.33□□□□□ -1.4
SMG1-210ENST00000565224 PIGPP57054 158 aa6.33□□□□□ -1.4
SMG1-210ENST00000565224 PCOLCEQ15113 449 aa6.33□□□□□ -1.4
SMG1-210ENST00000565224 PEA15Q15121 130 aa6.33□□□□□ -1.4
SMG1-210ENST00000565224 RSU1Q15404 277 aa6.33□□□□□ -1.4
SMG1-210ENST00000565224 SNAI3Q3KNW1 292 aa6.33□□□□□ -1.4
SMG1-210ENST00000565224 MRPL14Q6P1L8 145 aaKnown RBP6.33□□□□□ -1.4
SMG1-210ENST00000565224 DHRS11Q6UWP2 260 aa6.33□□□□□ -1.4
SMG1-210ENST00000565224 MAML2Q8IZL2 1156 aaPredicted RBP6.33□□□□□ -1.4
SMG1-210ENST00000565224 UBAC2Q8NBM4 344 aa6.33□□□□□ -1.4
SMG1-210ENST00000565224 LYPD6BQ8NI32 183 aa6.33□□□□□ -1.4
SMG1-210ENST00000565224 SGK3Q96BR1 496 aa6.33□□□□□ -1.4
SMG1-210ENST00000565224 INTS12Q96CB8 462 aaKnown RBP6.33□□□□□ -1.4
SMG1-210ENST00000565224 UCN2Q96RP3 112 aa6.33□□□□□ -1.4
SMG1-210ENST00000565224 FAAP24Q9BTP7 215 aa6.33□□□□□ -1.4
SMG1-210ENST00000565224 DUSP23Q9BVJ7 150 aa6.33□□□□□ -1.4
SMG1-210ENST00000565224 SMIM3Q9BZL3 60 aa6.33□□□□□ -1.4
SMG1-210ENST00000565224 ULBP2Q9BZM5 246 aa6.33□□□□□ -1.4
SMG1-210ENST00000565224 NAA60Q9H7X0 242 aa6.33□□□□□ -1.4
SMG1-210ENST00000565224 SMCO4Q9NRQ5 59 aa6.33□□□□□ -1.4
SMG1-210ENST00000565224 NECAP2Q9NVZ3 263 aa6.33□□□□□ -1.4
SMG1-210ENST00000565224 DCAF16Q9NXF7 216 aa6.33□□□□□ -1.4
SMG1-210ENST00000565224 AK3Q9UIJ7 227 aa6.33□□□□□ -1.4
SMG1-210ENST00000565224 FOXD3Q9UJU5 478 aaPredicted RBP6.33□□□□□ -1.4
SMG1-210ENST00000565224 KCNIP3Q9Y2W7 256 aa6.33□□□□□ -1.4
SMG1-210ENST00000565224 NSG2Q9Y328 171 aa6.33□□□□□ -1.4
SMG1-210ENST00000565224 LY6G6EA0A0G2JKS1 128 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 ZNF850A8MQ14 1090 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 C9JQL5 133 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 ANGPTL7O43827 346 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 OR8U9P0C7N5 309 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 ZNF728P0DKX0 622 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 LIFP15018 202 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 CRYGSP22914 178 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 ACKR3P25106 362 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 PAX6P26367 422 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 EPHA8P29322 1005 aaPredicted RBP6.32□□□□□ -1.4
SMG1-210ENST00000565224 SUCLG1P53597 346 aaKnown RBP6.32□□□□□ -1.4
SMG1-210ENST00000565224 DSCR4P56555 118 aaPredicted RBP6.32□□□□□ -1.4
SMG1-210ENST00000565224 MRPS34P82930 218 aaKnown RBP6.32□□□□□ -1.4
SMG1-210ENST00000565224 CHAF1BQ13112 559 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 RAB35Q15286 201 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 CNN3Q15417 329 aaKnown RBP6.32□□□□□ -1.4
SMG1-210ENST00000565224 HMGN3Q15651 99 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 TAF9Q16594 264 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 RSPO4Q2I0M5 234 aaPredicted RBP6.32□□□□□ -1.4
SMG1-210ENST00000565224 ABCA11PQ4W5N1 156 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 FAM27BQ5VT28 67 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 C20orf196Q8IYI0 205 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 SPEM1Q8N4L4 309 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 OR8U1Q8NH10 309 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 TOMM40LQ969M1 308 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 ERGIC1Q969X5 290 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 FBXO17Q96EF6 278 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 GALNT14Q96FL9 552 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 CMSS1Q9BQ75 279 aaKnown RBP6.32□□□□□ -1.4
SMG1-210ENST00000565224 ANGPTL4Q9BY76 406 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 LIME1Q9H400 295 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 ESRP2Q9H6T0 727 aaKnown RBP6.32□□□□□ -1.4
SMG1-210ENST00000565224 AKIRIN1Q9H9L7 192 aaPredicted RBP6.32□□□□□ -1.4
SMG1-210ENST00000565224 FAM212BQ9NTI7 297 aaPredicted RBP6.32□□□□□ -1.4
SMG1-210ENST00000565224 COA4Q9NYJ1 87 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 ATPIF1Q9UII2 106 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 DKKL1Q9UK85 242 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 KPTNQ9Y664 436 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 U3KQA8 63 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 CELSR3Q9NYQ7 3312 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 ZNF318Q5VUA4 2279 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 LOC102723996A0A087X1L8 192 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 FAM230AA0A1W2PPH8 454 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 COLCA2A8K830 154 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 SPRY1O43609 319 aaPredicted RBP6.32□□□□□ -1.4
SMG1-210ENST00000565224 MBPP02686 304 aaPredicted RBP6.32□□□□□ -1.4
SMG1-210ENST00000565224 IFNA4P05014 189 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 CELA2AP08217 269 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 OR5AC1P0C628 307 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 CCL3P10147 92 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 FOLR2P14207 255 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 OPRM1P35372 400 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 ID4P47928 161 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 RRADP55042 308 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 TMEM187Q14656 261 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 ZIC4Q8N9L1 334 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 OR2AE1Q8NHA4 323 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 RTN4IP1Q8WWV3 396 aaPredicted RBP6.32□□□□□ -1.4
SMG1-210ENST00000565224 REEP6Q96HR9 211 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 AKR1E2Q96JD6 320 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 GNRHR2Q96P88 292 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 C12orf57Q99622 126 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 SUCNR1Q9BXA5 334 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 ARV1Q9H2C2 271 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 WDR54Q9H977 334 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 RNF122Q9H9V4 155 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 CACFD1Q9UGQ2 172 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 NXT1Q9UKK6 140 aaKnown RBP6.32□□□□□ -1.4
SMG1-210ENST00000565224 STARD10Q9Y365 291 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 CABIN1Q9Y6J0 2220 aa6.32□□□□□ -1.4
SMG1-210ENST00000565224 IGKV1-27A0A075B6S5 117 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 IGHV1-45A0A0A0MS14 117 aa6.31□□□□□ -1.4
SMG1-210ENST00000565224 BORCS7-ASMTA0A0B4J1R7 106 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms