RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 VMO1Q7Z5L0 202 aa15.13■□□□□ 0.01
SYNGR3-204ENST00000564642 BATF2Q8N1L9 274 aa15.13■□□□□ 0.01
SYNGR3-204ENST00000564642 DHRSXQ8N5I4 330 aa15.13■□□□□ 0.01
SYNGR3-204ENST00000564642 C8orf46Q8TAG6 207 aa15.13■□□□□ 0.01
SYNGR3-204ENST00000564642 ADAT3Q96EY9 351 aaPredicted RBP15.13■□□□□ 0.01
SYNGR3-204ENST00000564642 SDSLQ96GA7 329 aa15.13■□□□□ 0.01
SYNGR3-204ENST00000564642 NRIP2Q9BQI9 281 aa15.13■□□□□ 0.01
SYNGR3-204ENST00000564642 ISG20L2Q9H9L3 353 aaKnown RBP15.13■□□□□ 0.01
SYNGR3-204ENST00000564642 ZMAT3Q9HA38 289 aaKnown RBP15.13■□□□□ 0.01
SYNGR3-204ENST00000564642 ZNF222Q9UK12 451 aa15.13■□□□□ 0.01
SYNGR3-204ENST00000564642 MAB21L2Q9Y586 359 aa15.13■□□□□ 0.01
SYNGR3-204ENST00000564642 ANKRD65E5RJM6 399 aa15.12■□□□□ 0.01
SYNGR3-204ENST00000564642 SLC1A7O00341 560 aa15.12■□□□□ 0.01
SYNGR3-204ENST00000564642 CLIC3O95833 236 aa15.12■□□□□ 0.01
SYNGR3-204ENST00000564642 RPSAP08865 295 aaKnown RBP15.12■□□□□ 0.01
SYNGR3-204ENST00000564642 OCM2P0CE71 109 aa15.12■□□□□ 0.01
SYNGR3-204ENST00000564642 OCMP0CE72 109 aaPredicted RBP15.12■□□□□ 0.01
SYNGR3-204ENST00000564642 PEX2P28328 305 aa15.12■□□□□ 0.01
SYNGR3-204ENST00000564642 RBP2P50120 134 aa15.12■□□□□ 0.01
SYNGR3-204ENST00000564642 GBX2P52951 348 aaPredicted RBP15.12■□□□□ 0.01
SYNGR3-204ENST00000564642 ATP1B3P54709 279 aa15.12■□□□□ 0.01
SYNGR3-204ENST00000564642 MRPL28Q13084 256 aaKnown RBP15.12■□□□□ 0.01
SYNGR3-204ENST00000564642 SMN1Q16637 294 aaKnown RBP15.12■□□□□ 0.01
SYNGR3-204ENST00000564642 DEFB112Q30KQ8 113 aa15.12■□□□□ 0.01
SYNGR3-204ENST00000564642 RUSC1-AS1Q66K80 236 aa15.12■□□□□ 0.01
SYNGR3-204ENST00000564642 ZNF561Q8N587 486 aa15.12■□□□□ 0.01
SYNGR3-204ENST00000564642 CD177Q8N6Q3 437 aa15.12■□□□□ 0.01
SYNGR3-204ENST00000564642 KIR3DL3Q8N743 410 aa15.12■□□□□ 0.01
SYNGR3-204ENST00000564642 SETD9Q8NE22 299 aa15.12■□□□□ 0.01
SYNGR3-204ENST00000564642 OR13C3Q8NGS6 347 aa15.12■□□□□ 0.01
SYNGR3-204ENST00000564642 SLC25A28Q96A46 364 aa15.12■□□□□ 0.01
SYNGR3-204ENST00000564642 OR14J1Q9UGF5 321 aa15.12■□□□□ 0.01
SYNGR3-204ENST00000564642 IGKV1-27A0A075B6S5 117 aa15.11■□□□□ 0.01
SYNGR3-204ENST00000564642 IGHV1-69DA0A0B4J2H0 117 aa15.11■□□□□ 0.01
SYNGR3-204ENST00000564642 MDFIC2A0A1B0GVS7 189 aa15.11■□□□□ 0.01
SYNGR3-204ENST00000564642 IRGMA1A4Y4 181 aa15.11■□□□□ 0.01
SYNGR3-204ENST00000564642 TMEM89A2RUT3 159 aa15.11■□□□□ 0.01
SYNGR3-204ENST00000564642 OR4C45A6NMZ5 311 aa15.11■□□□□ 0.01
SYNGR3-204ENST00000564642 WBP4O75554 376 aaKnown RBP15.11■□□□□ 0.01
SYNGR3-204ENST00000564642 INMTO95050 263 aa15.11■□□□□ 0.01
SYNGR3-204ENST00000564642 IGHV1-69P01742 117 aa15.11■□□□□ 0.01
SYNGR3-204ENST00000564642 ATF1P18846 271 aa15.11■□□□□ 0.01
SYNGR3-204ENST00000564642 PRKACBP22694 351 aa15.11■□□□□ 0.01
SYNGR3-204ENST00000564642 BLMHQ13867 455 aa15.11■□□□□ 0.01
SYNGR3-204ENST00000564642 DNAAF1Q8NEP3 725 aa15.11■□□□□ 0.01
SYNGR3-204ENST00000564642 CNIH3Q8TBE1 160 aa15.11■□□□□ 0.01
SYNGR3-204ENST00000564642 HAVCR2Q8TDQ0 301 aa15.11■□□□□ 0.01
SYNGR3-204ENST00000564642 CEP19Q96LK0 163 aa15.11■□□□□ 0.01
SYNGR3-204ENST00000564642 COMMD4Q9H0A8 199 aa15.11■□□□□ 0.01
SYNGR3-204ENST00000564642 ELL3Q9HB65 397 aaPredicted RBP15.11■□□□□ 0.01
SYNGR3-204ENST00000564642 HES4Q9HCC6 221 aa15.11■□□□□ 0.01
SYNGR3-204ENST00000564642 FGF20Q9NP95 211 aaPredicted RBP15.11■□□□□ 0.01
SYNGR3-204ENST00000564642 CYB5AP00167 134 aa15.1■□□□□ 0.01
SYNGR3-204ENST00000564642 KNG1P01042 644 aa15.1■□□□□ 0.01
SYNGR3-204ENST00000564642 CCDC159P0C7I6 412 aa15.1■□□□□ 0.01
SYNGR3-204ENST00000564642 MTCP1P56278 107 aa15.1■□□□□ 0.01
SYNGR3-204ENST00000564642 ERVK11-1P61568 191 aa15.1■□□□□ 0.01
SYNGR3-204ENST00000564642 SLC25A26Q70HW3 274 aa15.1■□□□□ 0.01
SYNGR3-204ENST00000564642 UTS2BQ765I0 119 aa15.1■□□□□ 0.01
SYNGR3-204ENST00000564642 PDZD9Q8IXQ8 264 aa15.1■□□□□ 0.01
SYNGR3-204ENST00000564642 MKXQ8IYA7 352 aa15.1■□□□□ 0.01
SYNGR3-204ENST00000564642 OR10AC1Q8NH08 325 aa15.1■□□□□ 0.01
SYNGR3-204ENST00000564642 OR5AK2Q8NH90 309 aa15.1■□□□□ 0.01
SYNGR3-204ENST00000564642 SLAMF9Q96A28 289 aa15.1■□□□□ 0.01
SYNGR3-204ENST00000564642 ZNF649Q9BS31 505 aa15.1■□□□□ 0.01
SYNGR3-204ENST00000564642 NOX4Q9NPH5 578 aa15.1■□□□□ 0.01
SYNGR3-204ENST00000564642 MTCH1Q9NZJ7 389 aa15.1■□□□□ 0.01
SYNGR3-204ENST00000564642 TRBV23-1A0A0A0MS06 115 aa15.09■□□□□ 0.01
SYNGR3-204ENST00000564642 IGKV1-9A0A0C4DH69 117 aa15.09■□□□□ 0.01
SYNGR3-204ENST00000564642 TMEM212A6NML5 194 aa15.09■□□□□ 0.01
SYNGR3-204ENST00000564642 AZGP1P25311 298 aaKnown RBP15.09■□□□□ 0.01
SYNGR3-204ENST00000564642 DCKP27707 260 aa15.09■□□□□ 0.01
SYNGR3-204ENST00000564642 CEBPDP49716 269 aaPredicted RBP15.09■□□□□ 0.01
SYNGR3-204ENST00000564642 ADARB1P78563 741 aaKnown RBP15.09■□□□□ 0.01
SYNGR3-204ENST00000564642 GUCA2AQ02747 115 aa15.09■□□□□ 0.01
SYNGR3-204ENST00000564642 SLC9A3R2Q15599 337 aa15.09■□□□□ 0.01
SYNGR3-204ENST00000564642 TMPRSS11AQ6ZMR5 421 aa15.09■□□□□ 0.01
SYNGR3-204ENST00000564642 C1orf122Q6ZSJ8 110 aa15.09■□□□□ 0.01
SYNGR3-204ENST00000564642 LHFPL2Q6ZUX7 228 aa15.09■□□□□ 0.01
SYNGR3-204ENST00000564642 FAM185AQ8N0U4 392 aa15.09■□□□□ 0.01
SYNGR3-204ENST00000564642 OR51A4Q8NGJ6 313 aa15.09■□□□□ 0.01
SYNGR3-204ENST00000564642 SPSB1Q96BD6 273 aa15.09■□□□□ 0.01
SYNGR3-204ENST00000564642 C1orf147Q96MC9 270 aaPredicted RBP15.09■□□□□ 0.01
SYNGR3-204ENST00000564642 PRDM13Q9H4Q3 707 aa15.09■□□□□ 0.01
SYNGR3-204ENST00000564642 NEK6Q9HC98 313 aa15.09■□□□□ 0.01
SYNGR3-204ENST00000564642 SIRT7Q9NRC8 400 aa15.09■□□□□ 0.01
SYNGR3-204ENST00000564642 TRBV2A0A0J9YWF9 115 aa15.08■□□□□ 0
SYNGR3-204ENST00000564642 E9PI62 339 aa15.08■□□□□ 0
SYNGR3-204ENST00000564642 CLDN34H7C241 214 aa15.08■□□□□ 0
SYNGR3-204ENST00000564642 M0R1W7 72 aa15.08■□□□□ 0
SYNGR3-204ENST00000564642 HAX1O00165 279 aa15.08■□□□□ 0
SYNGR3-204ENST00000564642 HOXA3O43365 443 aaPredicted RBP15.08■□□□□ 0
SYNGR3-204ENST00000564642 RNASE1P07998 156 aaKnown RBP15.08■□□□□ 0
SYNGR3-204ENST00000564642 LIMS3P0CW19 117 aa15.08■□□□□ 0
SYNGR3-204ENST00000564642 LIMS4P0CW20 117 aa15.08■□□□□ 0
SYNGR3-204ENST00000564642 POU3F4P49335 361 aa15.08■□□□□ 0
SYNGR3-204ENST00000564642 IL18R1Q13478 541 aa15.08■□□□□ 0
SYNGR3-204ENST00000564642 OGFRL1Q5TC84 451 aaPredicted RBP15.08■□□□□ 0
SYNGR3-204ENST00000564642 METAP1DQ6UB28 335 aaPredicted RBP15.08■□□□□ 0
SYNGR3-204ENST00000564642 Q6YL49 198 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms