RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 C12orf49Q9H741 205 aa15.42■□□□□ 0.06
GDE1-203ENST00000564172 GPN1Q9HCN4 374 aaPredicted RBP15.42■□□□□ 0.06
GDE1-203ENST00000564172 H3BSH0 61 aa15.41■□□□□ 0.06
GDE1-203ENST00000564172 S100A2P29034 98 aa15.41■□□□□ 0.06
GDE1-203ENST00000564172 MNDAP41218 407 aa15.41■□□□□ 0.06
GDE1-203ENST00000564172 CDX1P47902 265 aaPredicted RBP15.41■□□□□ 0.06
GDE1-203ENST00000564172 SOX2P48431 317 aa15.41■□□□□ 0.06
GDE1-203ENST00000564172 SRP9P49458 86 aaKnown RBP15.41■□□□□ 0.06
GDE1-203ENST00000564172 PITPNAQ00169 270 aa15.41■□□□□ 0.06
GDE1-203ENST00000564172 SNTB2Q13425 540 aaKnown RBP15.41■□□□□ 0.06
GDE1-203ENST00000564172 LINC00303Q3SY05 128 aa15.41■□□□□ 0.06
GDE1-203ENST00000564172 ACSF3Q4G176 576 aaPredicted RBP15.41■□□□□ 0.06
GDE1-203ENST00000564172 NR2C2APQ86WQ0 139 aa15.41■□□□□ 0.06
GDE1-203ENST00000564172 WNT2BQ93097 391 aa15.41■□□□□ 0.06
GDE1-203ENST00000564172 FAM122AQ96E09 287 aa15.41■□□□□ 0.06
GDE1-203ENST00000564172 PRSS50Q9UI38 385 aa15.41■□□□□ 0.06
GDE1-203ENST00000564172 MED12LQ86YW9 2145 aa15.41■□□□□ 0.06
GDE1-203ENST00000564172 A0A0D9SG52 128 aa15.41■□□□□ 0.06
GDE1-203ENST00000564172 CXorf65A6NEN9 183 aa15.41■□□□□ 0.06
GDE1-203ENST00000564172 CTSSP25774 331 aa15.41■□□□□ 0.06
GDE1-203ENST00000564172 GRB2P62993 217 aaKnown RBP15.41■□□□□ 0.06
GDE1-203ENST00000564172 ARF1P84077 181 aaKnown RBP15.41■□□□□ 0.06
GDE1-203ENST00000564172 OR8G1Q15617 311 aa15.41■□□□□ 0.06
GDE1-203ENST00000564172 KRTCAP3Q53RY4 240 aa15.41■□□□□ 0.06
GDE1-203ENST00000564172 ELFN2Q5R3F8 820 aa15.41■□□□□ 0.06
GDE1-203ENST00000564172 C9orf135Q5VTT2 229 aa15.41■□□□□ 0.06
GDE1-203ENST00000564172 ZNF324BQ6AW86 544 aaPredicted RBP15.41■□□□□ 0.06
GDE1-203ENST00000564172 ZNF585AQ6P3V2 769 aa15.41■□□□□ 0.06
GDE1-203ENST00000564172 GCNT2Q8N0V5 402 aa15.41■□□□□ 0.06
GDE1-203ENST00000564172 PLEK2Q9NYT0 353 aa15.41■□□□□ 0.06
GDE1-203ENST00000564172 OPN4Q9UHM6 478 aa15.41■□□□□ 0.06
GDE1-203ENST00000564172 BSNQ9UPA5 3926 aa15.4■□□□□ 0.06
GDE1-203ENST00000564172 DOK2O60496 412 aa15.4■□□□□ 0.06
GDE1-203ENST00000564172 ZNF32P17041 273 aa15.4■□□□□ 0.06
GDE1-203ENST00000564172 SRMP19623 302 aa15.4■□□□□ 0.06
GDE1-203ENST00000564172 OR3A2P47893 321 aa15.4■□□□□ 0.06
GDE1-203ENST00000564172 MECP2P51608 486 aaKnown RBP15.4■□□□□ 0.06
GDE1-203ENST00000564172 SLC16A14Q7RTX9 510 aa15.4■□□□□ 0.06
GDE1-203ENST00000564172 SYT9Q86SS6 491 aa15.4■□□□□ 0.06
GDE1-203ENST00000564172 ABHD1Q96SE0 405 aa15.4■□□□□ 0.06
GDE1-203ENST00000564172 PBOV1Q9GZY1 135 aa15.4■□□□□ 0.06
GDE1-203ENST00000564172 CA10Q9NS85 328 aa15.4■□□□□ 0.06
GDE1-203ENST00000564172 GOLT1BQ9Y3E0 138 aa15.4■□□□□ 0.06
GDE1-203ENST00000564172 NAP1L6A6NFF2 107 aa15.4■□□□□ 0.06
GDE1-203ENST00000564172 FARS2O95363 451 aaKnown RBP15.4■□□□□ 0.06
GDE1-203ENST00000564172 ISG15P05161 165 aa15.4■□□□□ 0.06
GDE1-203ENST00000564172 PATE4P0C8F1 98 aa15.4■□□□□ 0.06
GDE1-203ENST00000564172 GUSBP1Q15486 140 aa15.4■□□□□ 0.06
GDE1-203ENST00000564172 RSPO1Q2MKA7 263 aaPredicted RBP15.4■□□□□ 0.06
GDE1-203ENST00000564172 FBXW9Q5XUX1 488 aa15.4■□□□□ 0.06
GDE1-203ENST00000564172 OR52W1Q6IF63 320 aa15.4■□□□□ 0.06
GDE1-203ENST00000564172 UNQ6494/PRO21346Q6UXR6 183 aa15.4■□□□□ 0.06
GDE1-203ENST00000564172 FAM214BQ7L5A3 538 aa15.4■□□□□ 0.06
GDE1-203ENST00000564172 ZNF627Q7L945 461 aa15.4■□□□□ 0.06
GDE1-203ENST00000564172 C1QL4Q86Z23 238 aa15.4■□□□□ 0.06
GDE1-203ENST00000564172 C9orf106Q8NAJ2 232 aa15.4■□□□□ 0.06
GDE1-203ENST00000564172 FGFBP3Q8TAT2 258 aa15.4■□□□□ 0.06
GDE1-203ENST00000564172 TMEM106AQ96A25 262 aa15.4■□□□□ 0.06
GDE1-203ENST00000564172 RTTNQ86VV8 2226 aa15.4■□□□□ 0.06
GDE1-203ENST00000564172 PIEZO2Q9H5I5 2752 aa15.4■□□□□ 0.06
GDE1-203ENST00000564172 GTF3C1Q12789 2109 aa15.4■□□□□ 0.06
GDE1-203ENST00000564172 GSTZ1O43708 216 aaPredicted RBP15.39■□□□□ 0.05
GDE1-203ENST00000564172 CREBL2O60519 120 aaPredicted RBP15.39■□□□□ 0.05
GDE1-203ENST00000564172 TTRP02766 147 aa15.39■□□□□ 0.05
GDE1-203ENST00000564172 OR4E1P0C645 316 aa15.39■□□□□ 0.05
GDE1-203ENST00000564172 PSMB1P20618 241 aaKnown RBP15.39■□□□□ 0.05
GDE1-203ENST00000564172 OR10A3P58181 314 aa15.39■□□□□ 0.05
GDE1-203ENST00000564172 ZNF121P58317 390 aaPredicted RBP15.39■□□□□ 0.05
GDE1-203ENST00000564172 NSUN5P2Q63ZY6 315 aa15.39■□□□□ 0.05
GDE1-203ENST00000564172 ZNF626Q68DY1 528 aa15.39■□□□□ 0.05
GDE1-203ENST00000564172 CISD2Q8N5K1 135 aaKnown RBP15.39■□□□□ 0.05
GDE1-203ENST00000564172 MFFQ9GZY8 342 aa15.39■□□□□ 0.05
GDE1-203ENST00000564172 GAR1Q9NY12 217 aaKnown RBP15.39■□□□□ 0.05
GDE1-203ENST00000564172 TIMM10BQ9Y5J6 103 aa15.39■□□□□ 0.05
GDE1-203ENST00000564172 TRBV5-7A0A0A0MS05 114 aa15.39■□□□□ 0.05
GDE1-203ENST00000564172 ZNF35P13682 527 aa15.39■□□□□ 0.05
GDE1-203ENST00000564172 OTX1P32242 354 aaPredicted RBP15.39■□□□□ 0.05
GDE1-203ENST00000564172 CX3CR1P49238 355 aa15.39■□□□□ 0.05
GDE1-203ENST00000564172 PCBD1P61457 104 aa15.39■□□□□ 0.05
GDE1-203ENST00000564172 KLF9Q13886 244 aaPredicted RBP15.39■□□□□ 0.05
GDE1-203ENST00000564172 NKAPLQ5M9Q1 402 aa15.39■□□□□ 0.05
GDE1-203ENST00000564172 TMEM244Q5VVB8 128 aa15.39■□□□□ 0.05
GDE1-203ENST00000564172 ZNF283Q8N7M2 679 aa15.39■□□□□ 0.05
GDE1-203ENST00000564172 TSEN15Q8WW01 171 aaKnown RBP15.39■□□□□ 0.05
GDE1-203ENST00000564172 ASB5Q8WWX0 329 aa15.39■□□□□ 0.05
GDE1-203ENST00000564172 MOB1AQ9H8S9 216 aa15.39■□□□□ 0.05
GDE1-203ENST00000564172 HHLA2Q9UM44 414 aa15.39■□□□□ 0.05
GDE1-203ENST00000564172 CACNA1AO00555 2505 aa15.38■□□□□ 0.05
GDE1-203ENST00000564172 A0A0G2JK05 382 aa15.38■□□□□ 0.05
GDE1-203ENST00000564172 F5H5K5 113 aa15.38■□□□□ 0.05
GDE1-203ENST00000564172 SYNGR3O43761 229 aa15.38■□□□□ 0.05
GDE1-203ENST00000564172 NFYBP25208 207 aa15.38■□□□□ 0.05
GDE1-203ENST00000564172 PSG4Q00888 419 aa15.38■□□□□ 0.05
GDE1-203ENST00000564172 RAB35Q15286 201 aa15.38■□□□□ 0.05
GDE1-203ENST00000564172 MPPED2Q15777 294 aa15.38■□□□□ 0.05
GDE1-203ENST00000564172 USF2Q15853 346 aaPredicted RBP15.38■□□□□ 0.05
GDE1-203ENST00000564172 ZNF774Q6NX45 483 aa15.38■□□□□ 0.05
GDE1-203ENST00000564172 ABHD12BQ7Z5M8 362 aaPredicted RBP15.38■□□□□ 0.05
GDE1-203ENST00000564172 TMEM200AQ86VY9 491 aa15.38■□□□□ 0.05
GDE1-203ENST00000564172 OR1S2Q8NGQ3 325 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms