RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 A0A1W2PR64 198 aa14□□□□□ -0.17
VPS9D1-203ENST00000563798 A0A1W2PRV1 198 aa14□□□□□ -0.17
VPS9D1-203ENST00000563798 H3BUX3 64 aa14□□□□□ -0.17
VPS9D1-203ENST00000563798 ANGPTL7O43827 346 aa14□□□□□ -0.17
VPS9D1-203ENST00000563798 SULT1C4O75897 302 aa14□□□□□ -0.17
VPS9D1-203ENST00000563798 NXPH2O95156 264 aa14□□□□□ -0.17
VPS9D1-203ENST00000563798 TK1P04183 234 aa14□□□□□ -0.17
VPS9D1-203ENST00000563798 HTR1FP30939 366 aa14□□□□□ -0.17
VPS9D1-203ENST00000563798 KIR2DS4P43632 304 aa14□□□□□ -0.17
VPS9D1-203ENST00000563798 TMED1Q13445 227 aa14□□□□□ -0.17
VPS9D1-203ENST00000563798 C11orf88Q6PI97 169 aa14□□□□□ -0.17
VPS9D1-203ENST00000563798 PLEKHG7Q6ZR37 379 aa14□□□□□ -0.17
VPS9D1-203ENST00000563798 SSX6Q7RTT6 188 aa14□□□□□ -0.17
VPS9D1-203ENST00000563798 CATSPERDQ86XM0 798 aa14□□□□□ -0.17
VPS9D1-203ENST00000563798 OR51G2Q8NGK0 314 aa14□□□□□ -0.17
VPS9D1-203ENST00000563798 SSX3Q99909 188 aa14□□□□□ -0.17
VPS9D1-203ENST00000563798 PPA2Q9H2U2 334 aa14□□□□□ -0.17
VPS9D1-203ENST00000563798 SEBOXQ9HB31 216 aaPredicted RBP14□□□□□ -0.17
VPS9D1-203ENST00000563798 GTF2A1LQ9UNN4 478 aa14□□□□□ -0.17
VPS9D1-203ENST00000563798 ANKRD61A6NGH8 418 aa13.99□□□□□ -0.17
VPS9D1-203ENST00000563798 FAM90A8PA6NJQ4 464 aa13.99□□□□□ -0.17
VPS9D1-203ENST00000563798 C17orf98A8MV24 154 aa13.99□□□□□ -0.17
VPS9D1-203ENST00000563798 K7N7A8 449 aa13.99□□□□□ -0.17
VPS9D1-203ENST00000563798 KRT8P05787 483 aa13.99□□□□□ -0.17
VPS9D1-203ENST00000563798 FCGR1AP12314 374 aa13.99□□□□□ -0.17
VPS9D1-203ENST00000563798 RASSF2P50749 326 aa13.99□□□□□ -0.17
VPS9D1-203ENST00000563798 DLX6P56179 175 aa13.99□□□□□ -0.17
VPS9D1-203ENST00000563798 LRRC75BQ2VPJ9 315 aa13.99□□□□□ -0.17
VPS9D1-203ENST00000563798 ASRGL1Q7L266 308 aa13.99□□□□□ -0.17
VPS9D1-203ENST00000563798 CIB1Q99828 191 aa13.99□□□□□ -0.17
VPS9D1-203ENST00000563798 GABARAPL3Q9BY60 117 aa13.99□□□□□ -0.17
VPS9D1-203ENST00000563798 RANBP3Q9H6Z4 567 aaPredicted RBP13.99□□□□□ -0.17
VPS9D1-203ENST00000563798 NOTCH1P46531 2555 aa13.99□□□□□ -0.17
VPS9D1-203ENST00000563798 A0A1W2PQL4 384 aaPredicted RBP13.98□□□□□ -0.17
VPS9D1-203ENST00000563798 METTL15A6NJ78 407 aa13.98□□□□□ -0.17
VPS9D1-203ENST00000563798 VGLL3A8MV65 326 aa13.98□□□□□ -0.17
VPS9D1-203ENST00000563798 ZNF737O75373 536 aa13.98□□□□□ -0.17
VPS9D1-203ENST00000563798 RBP4P02753 201 aa13.98□□□□□ -0.17
VPS9D1-203ENST00000563798 CEBPDP49716 269 aaPredicted RBP13.98□□□□□ -0.17
VPS9D1-203ENST00000563798 EFNB2P52799 333 aa13.98□□□□□ -0.17
VPS9D1-203ENST00000563798 ERVFRD-1P60508 538 aa13.98□□□□□ -0.17
VPS9D1-203ENST00000563798 ISL1P61371 349 aa13.98□□□□□ -0.17
VPS9D1-203ENST00000563798 UBE2V2Q15819 145 aa13.98□□□□□ -0.17
VPS9D1-203ENST00000563798 LIAT1Q6ZQX7 453 aa13.98□□□□□ -0.17
VPS9D1-203ENST00000563798 ANGPTL5Q86XS5 388 aa13.98□□□□□ -0.17
VPS9D1-203ENST00000563798 YIPF7Q8N8F6 280 aa13.98□□□□□ -0.17
VPS9D1-203ENST00000563798 OR8J1Q8NGP2 316 aa13.98□□□□□ -0.17
VPS9D1-203ENST00000563798 PPP1R35Q8TAP8 253 aa13.98□□□□□ -0.17
VPS9D1-203ENST00000563798 PIFOQ8TCI5 191 aa13.98□□□□□ -0.17
VPS9D1-203ENST00000563798 RORBQ92753 470 aa13.98□□□□□ -0.17
VPS9D1-203ENST00000563798 C10orf35Q96D05 121 aa13.98□□□□□ -0.17
VPS9D1-203ENST00000563798 OSBPL10Q9BXB5 764 aa13.98□□□□□ -0.17
VPS9D1-203ENST00000563798 RAB18Q9NP72 206 aa13.98□□□□□ -0.17
VPS9D1-203ENST00000563798 SLC7A11Q9UPY5 501 aa13.98□□□□□ -0.17
VPS9D1-203ENST00000563798 MEGF11A6BM72 1044 aa13.97□□□□□ -0.17
VPS9D1-203ENST00000563798 A6NIN4 97 aa13.97□□□□□ -0.17
VPS9D1-203ENST00000563798 SYT7O43581 403 aa13.97□□□□□ -0.17
VPS9D1-203ENST00000563798 ATP5HO75947 161 aa13.97□□□□□ -0.17
VPS9D1-203ENST00000563798 RPP14O95059 124 aaKnown RBP13.97□□□□□ -0.17
VPS9D1-203ENST00000563798 CHRM2P08172 466 aa13.97□□□□□ -0.17
VPS9D1-203ENST00000563798 CCL3L1P16619 93 aa13.97□□□□□ -0.17
VPS9D1-203ENST00000563798 GABRA5P31644 462 aa13.97□□□□□ -0.17
VPS9D1-203ENST00000563798 POLR2IP36954 125 aaKnown RBP13.97□□□□□ -0.17
VPS9D1-203ENST00000563798 FUT6P51993 359 aa13.97□□□□□ -0.17
VPS9D1-203ENST00000563798 ZNF273Q14593 569 aa13.97□□□□□ -0.17
VPS9D1-203ENST00000563798 AMIGO2Q86SJ2 522 aa13.97□□□□□ -0.17
VPS9D1-203ENST00000563798 DTX3Q8N9I9 347 aa13.97□□□□□ -0.17
VPS9D1-203ENST00000563798 OR4M1Q8NGD0 313 aa13.97□□□□□ -0.17
VPS9D1-203ENST00000563798 UBE2FQ969M7 185 aa13.97□□□□□ -0.17
VPS9D1-203ENST00000563798 CDCA4Q9BXL8 241 aa13.97□□□□□ -0.17
VPS9D1-203ENST00000563798 CHST5Q9GZS9 411 aa13.97□□□□□ -0.17
VPS9D1-203ENST00000563798 MTCH1Q9NZJ7 389 aa13.97□□□□□ -0.17
VPS9D1-203ENST00000563798 IGKV1-27A0A075B6S5 117 aa13.96□□□□□ -0.17
VPS9D1-203ENST00000563798 GATBO75879 557 aaKnown RBP13.96□□□□□ -0.17
VPS9D1-203ENST00000563798 TSPAN15O95858 294 aa13.96□□□□□ -0.17
VPS9D1-203ENST00000563798 HERPUD1Q15011 391 aa13.96□□□□□ -0.17
VPS9D1-203ENST00000563798 C2orf68Q2NKX9 166 aa13.96□□□□□ -0.17
VPS9D1-203ENST00000563798 C1orf146Q5VVC0 180 aa13.96□□□□□ -0.17
VPS9D1-203ENST00000563798 OR4C13Q8NGP0 309 aa13.96□□□□□ -0.17
VPS9D1-203ENST00000563798 RFKQ969G6 155 aa13.96□□□□□ -0.17
VPS9D1-203ENST00000563798 RNF166Q96A37 237 aaPredicted RBP13.96□□□□□ -0.17
VPS9D1-203ENST00000563798 EME1Q96AY2 570 aa13.96□□□□□ -0.17
VPS9D1-203ENST00000563798 CENPNQ96H22 339 aaPredicted RBP13.96□□□□□ -0.17
VPS9D1-203ENST00000563798 CEP19Q96LK0 163 aa13.96□□□□□ -0.17
VPS9D1-203ENST00000563798 TBX5Q99593 518 aa13.96□□□□□ -0.17
VPS9D1-203ENST00000563798 PLEKHA1Q9HB21 404 aa13.96□□□□□ -0.17
VPS9D1-203ENST00000563798 OR14J1Q9UGF5 321 aa13.96□□□□□ -0.17
VPS9D1-203ENST00000563798 FAM230AA0A1W2PPH8 454 aa13.95□□□□□ -0.18
VPS9D1-203ENST00000563798 ODF3BA8MYP8 253 aa13.95□□□□□ -0.18
VPS9D1-203ENST00000563798 F8VVB4 439 aa13.95□□□□□ -0.18
VPS9D1-203ENST00000563798 F8VWA3 439 aa13.95□□□□□ -0.18
VPS9D1-203ENST00000563798 BMXP51813 675 aa13.95□□□□□ -0.18
VPS9D1-203ENST00000563798 LGALS4P56470 323 aa13.95□□□□□ -0.18
VPS9D1-203ENST00000563798 COL10A1Q03692 680 aa13.95□□□□□ -0.18
VPS9D1-203ENST00000563798 MEF2CQ06413 473 aaPredicted RBP13.95□□□□□ -0.18
VPS9D1-203ENST00000563798 PRSS35Q8N3Z0 413 aa13.95□□□□□ -0.18
VPS9D1-203ENST00000563798 DNAAF1Q8NEP3 725 aa13.95□□□□□ -0.18
VPS9D1-203ENST00000563798 OR11H6Q8NGC7 330 aa13.95□□□□□ -0.18
VPS9D1-203ENST00000563798 TRMT10AQ8TBZ6 339 aaKnown RBP13.95□□□□□ -0.18
VPS9D1-203ENST00000563798 TRUB1Q8WWH5 349 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms