RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 ZFPL1O95159 310 aa23.33■■□□□ 1.33
NME3-203ENST00000563367 ZNF20P17024 532 aa23.33■■□□□ 1.33
NME3-203ENST00000563367 ATF1P18846 271 aa23.33■■□□□ 1.33
NME3-203ENST00000563367 CEBPDP49716 269 aaPredicted RBP23.33■■□□□ 1.33
NME3-203ENST00000563367 ERVK11-1P61568 191 aa23.33■■□□□ 1.33
NME3-203ENST00000563367 IL18R1Q13478 541 aa23.33■■□□□ 1.33
NME3-203ENST00000563367 C9orf139Q6ZV77 190 aa23.33■■□□□ 1.33
NME3-203ENST00000563367 UTS2BQ765I0 119 aa23.33■■□□□ 1.33
NME3-203ENST00000563367 OR13C3Q8NGS6 347 aa23.33■■□□□ 1.33
NME3-203ENST00000563367 JMJD8Q96S16 334 aa23.33■■□□□ 1.33
NME3-203ENST00000563367 ELL3Q9HB65 397 aaPredicted RBP23.33■■□□□ 1.33
NME3-203ENST00000563367 MTCH1Q9NZJ7 389 aa23.33■■□□□ 1.33
NME3-203ENST00000563367 F8VVB4 439 aa23.32■■□□□ 1.32
NME3-203ENST00000563367 F8VWA3 439 aa23.32■■□□□ 1.32
NME3-203ENST00000563367 H0YAE9 185 aa23.32■■□□□ 1.32
NME3-203ENST00000563367 DCKP27707 260 aa23.32■■□□□ 1.32
NME3-203ENST00000563367 GTF2A1P52655 376 aaPredicted RBP23.32■■□□□ 1.32
NME3-203ENST00000563367 GBX2P52951 348 aaPredicted RBP23.32■■□□□ 1.32
NME3-203ENST00000563367 CAV3P56539 151 aa23.32■■□□□ 1.32
NME3-203ENST00000563367 CNN3Q15417 329 aaKnown RBP23.32■■□□□ 1.32
NME3-203ENST00000563367 LAIR2Q6ISS4 152 aa23.32■■□□□ 1.32
NME3-203ENST00000563367 C8orf46Q8TAG6 207 aa23.32■■□□□ 1.32
NME3-203ENST00000563367 ZFAND2BQ8WV99 257 aa23.32■■□□□ 1.32
NME3-203ENST00000563367 BORCS8Q96FH0 119 aa23.32■■□□□ 1.32
NME3-203ENST00000563367 PDCD1LG2Q9BQ51 273 aa23.32■■□□□ 1.32
NME3-203ENST00000563367 CENPVL3A0A0U1RRI6 287 aa23.31■■□□□ 1.32
NME3-203ENST00000563367 NDUFB7P17568 137 aa23.31■■□□□ 1.32
NME3-203ENST00000563367 PRDX2P32119 198 aa23.31■■□□□ 1.32
NME3-203ENST00000563367 MRPL28Q13084 256 aaKnown RBP23.31■■□□□ 1.32
NME3-203ENST00000563367 GPR157Q5UAW9 335 aa23.31■■□□□ 1.32
NME3-203ENST00000563367 RUSC1-AS1Q66K80 236 aa23.31■■□□□ 1.32
NME3-203ENST00000563367 DNAAF1Q8NEP3 725 aa23.31■■□□□ 1.32
NME3-203ENST00000563367 TMEM185AQ8NFB2 350 aa23.31■■□□□ 1.32
NME3-203ENST00000563367 SLAMF9Q96A28 289 aa23.31■■□□□ 1.32
NME3-203ENST00000563367 ONECUT1Q9UBC0 465 aa23.31■■□□□ 1.32
NME3-203ENST00000563367 ERICH4A6NGS2 130 aa23.3■■□□□ 1.32
NME3-203ENST00000563367 TMEM212A6NML5 194 aa23.3■■□□□ 1.32
NME3-203ENST00000563367 INMTO95050 263 aa23.3■■□□□ 1.32
NME3-203ENST00000563367 OR2G6Q5TZ20 316 aa23.3■■□□□ 1.32
NME3-203ENST00000563367 XAF1Q6GPH4 301 aa23.3■■□□□ 1.32
NME3-203ENST00000563367 SLC25A26Q70HW3 274 aa23.3■■□□□ 1.32
NME3-203ENST00000563367 OR5AK2Q8NH90 309 aa23.3■■□□□ 1.32
NME3-203ENST00000563367 C1orf147Q96MC9 270 aaPredicted RBP23.3■■□□□ 1.32
NME3-203ENST00000563367 CLEC2DQ9UHP7 191 aa23.3■■□□□ 1.32
NME3-203ENST00000563367 DIMT1Q9UNQ2 313 aaKnown RBP23.3■■□□□ 1.32
NME3-203ENST00000563367 CAB39Q9Y376 341 aaPredicted RBP23.3■■□□□ 1.32
NME3-203ENST00000563367 KPTNQ9Y664 436 aa23.3■■□□□ 1.32
NME3-203ENST00000563367 HSPE1-MOB4S4R3N1 261 aa23.3■■□□□ 1.32
NME3-203ENST00000563367 MDFIC2A0A1B0GVS7 189 aa23.29■■□□□ 1.32
NME3-203ENST00000563367 IRGMA1A4Y4 181 aa23.29■■□□□ 1.32
NME3-203ENST00000563367 TRIM77I1YAP6 450 aa23.29■■□□□ 1.32
NME3-203ENST00000563367 AZGP1P25311 298 aaKnown RBP23.29■■□□□ 1.32
NME3-203ENST00000563367 RBP2P50120 134 aa23.29■■□□□ 1.32
NME3-203ENST00000563367 SLC34A1Q06495 639 aa23.29■■□□□ 1.32
NME3-203ENST00000563367 RBMS3Q6XE24 437 aaKnown RBP23.29■■□□□ 1.32
NME3-203ENST00000563367 RNF144BQ7Z419 303 aa23.29■■□□□ 1.32
NME3-203ENST00000563367 C8orf59Q8N0T1 100 aaPredicted RBP23.29■■□□□ 1.32
NME3-203ENST00000563367 FAM216AQ8WUB2 273 aa23.29■■□□□ 1.32
NME3-203ENST00000563367 GGHQ92820 318 aa23.29■■□□□ 1.32
NME3-203ENST00000563367 LHX4Q969G2 390 aa23.29■■□□□ 1.32
NME3-203ENST00000563367 CEP19Q96LK0 163 aa23.29■■□□□ 1.32
NME3-203ENST00000563367 DMRTB1Q96MA1 342 aa23.29■■□□□ 1.32
NME3-203ENST00000563367 OR14J1Q9UGF5 321 aa23.29■■□□□ 1.32
NME3-203ENST00000563367 DSCAML1Q8TD84 2053 aa23.28■■□□□ 1.32
NME3-203ENST00000563367 TRBV2A0A0J9YWF9 115 aa23.28■■□□□ 1.32
NME3-203ENST00000563367 CCDC159P0C7I6 412 aa23.28■■□□□ 1.32
NME3-203ENST00000563367 PRKACBP22694 351 aa23.28■■□□□ 1.32
NME3-203ENST00000563367 ATP1B3P54709 279 aa23.28■■□□□ 1.32
NME3-203ENST00000563367 MTCP1P56278 107 aa23.28■■□□□ 1.32
NME3-203ENST00000563367 UBA52P62987 128 aaKnown RBP23.28■■□□□ 1.32
NME3-203ENST00000563367 PDCD1Q15116 288 aa23.28■■□□□ 1.32
NME3-203ENST00000563367 VMO1Q7Z5L0 202 aa23.28■■□□□ 1.32
NME3-203ENST00000563367 Q8N7P7 452 aa23.28■■□□□ 1.32
NME3-203ENST00000563367 FBLIM1Q8WUP2 373 aa23.28■■□□□ 1.32
NME3-203ENST00000563367 NRG4Q8WWG1 115 aa23.28■■□□□ 1.32
NME3-203ENST00000563367 DUX5Q96PT3 197 aa23.28■■□□□ 1.32
NME3-203ENST00000563367 KNG1P01042 644 aa23.27■■□□□ 1.32
NME3-203ENST00000563367 CAPZA1P52907 286 aa23.27■■□□□ 1.32
NME3-203ENST00000563367 ZNF561Q8N587 486 aa23.27■■□□□ 1.32
NME3-203ENST00000563367 OR13C9Q8NGT0 318 aa23.27■■□□□ 1.32
NME3-203ENST00000563367 HAVCR2Q8TDQ0 301 aa23.27■■□□□ 1.32
NME3-203ENST00000563367 RGP1Q92546 391 aaPredicted RBP23.27■■□□□ 1.32
NME3-203ENST00000563367 SPSB1Q96BD6 273 aa23.27■■□□□ 1.32
NME3-203ENST00000563367 TMEM80Q96HE8 168 aa23.27■■□□□ 1.32
NME3-203ENST00000563367 OPALINQ96PE5 141 aa23.27■■□□□ 1.32
NME3-203ENST00000563367 COMMD4Q9H0A8 199 aa23.27■■□□□ 1.32
NME3-203ENST00000563367 EXOSC1Q9Y3B2 195 aaKnown RBP23.27■■□□□ 1.32
NME3-203ENST00000563367 SIRT4Q9Y6E7 314 aaPredicted RBP23.27■■□□□ 1.32
NME3-203ENST00000563367 DNAJC9-AS1A6NH13 148 aa23.26■■□□□ 1.31
NME3-203ENST00000563367 POU3F4P49335 361 aa23.26■■□□□ 1.31
NME3-203ENST00000563367 DLX1P56177 255 aa23.26■■□□□ 1.31
NME3-203ENST00000563367 BPIFB3P59826 476 aa23.26■■□□□ 1.31
NME3-203ENST00000563367 PRB3Q04118 309 aaPredicted RBP23.26■■□□□ 1.31
NME3-203ENST00000563367 BAMBIQ13145 260 aa23.26■■□□□ 1.31
NME3-203ENST00000563367 DEFB112Q30KQ8 113 aa23.26■■□□□ 1.31
NME3-203ENST00000563367 TMPRSS11AQ6ZMR5 421 aa23.26■■□□□ 1.31
NME3-203ENST00000563367 LHFPL2Q6ZUX7 228 aa23.26■■□□□ 1.31
NME3-203ENST00000563367 PDZD9Q8IXQ8 264 aa23.26■■□□□ 1.31
NME3-203ENST00000563367 KIR3DL3Q8N743 410 aa23.26■■□□□ 1.31
NME3-203ENST00000563367 RPS4Y2Q8TD47 263 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms