RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 HLA-DQA1P01909 254 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 LINC00869P0C866 280 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 ZNF32P17041 273 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 M6PRP20645 277 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 PSMB5P28074 263 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 OPRK1P41145 380 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 DSTNP60981 165 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 PPP1CAP62136 330 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 SKP1P63208 163 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 PRKCDQ05655 676 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 GNA13Q14344 377 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 TRAM1Q15629 374 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 TRIP13Q15645 432 aaPredicted RBP1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 USF2Q15853 346 aaPredicted RBP1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 CCL15Q16663 113 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 UBE2SQ16763 222 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 CDNFQ49AH0 187 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 YIF1BQ5BJH7 314 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 SYT6Q5T7P8 510 aaPredicted RBP1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 HBMQ6B0K9 141 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 CLEC19AQ6UXS0 136 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 CYP4Z1Q86W10 505 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 STX12Q86Y82 276 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 OR2L8Q8NGY9 312 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 CDC26Q8NHZ8 85 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 ANGPTL6Q8NI99 470 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 ZNF420Q8TAQ5 688 aaPredicted RBP1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 LINC01560Q8TB33 94 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 ENKURQ8TC29 256 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 ZFAND1Q8TCF1 268 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 PDCD6IPQ8WUM4 868 aaKnown RBP1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 PPP1R14BQ96C90 147 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 STARD4Q96DR4 205 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 ZMYND19Q96E35 227 aaPredicted RBP1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 SMIM8Q96KF7 97 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 CTRCQ99895 268 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 SELENOSQ9BQE4 189 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 TSGA10Q9BZW7 698 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 SDHAF3Q9NRP4 125 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 CA10Q9NS85 328 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 FKBP14Q9NWM8 211 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 RHBDL2Q9NX52 303 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 TAS2R13Q9NYV9 303 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 ENOPH1Q9UHY7 261 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 SCML1Q9UN30 329 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 URGCP-MRPS24S4R325 110 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 CABIN1Q9Y6J0 2220 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 LOXHD1Q8IVV2 1947 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 RAD50Q92878 1312 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 MIA3Q5JRA6 1907 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 IGHV3-72A0A0B4J1Y9 119 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 A0A0G2JMP0 313 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 A0A0X1KG70 313 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 GOLGA6L10A6NI86 522 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 H3BP45 60 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 ZNF593O00488 134 aaPredicted RBP1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 TAAR5O14804 337 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 ZNF207O43670 478 aaKnown RBP1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 SCN2BO60939 215 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 ZNF189O75820 626 aaPredicted RBP1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 CCNE2O96020 404 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 CD8AP01732 235 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 GP1BAP07359 652 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 MRPL3P09001 348 aaKnown RBP1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 C1GALT1C1LP0DN25 315 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 IL3RAP26951 378 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 EVI2BP34910 448 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 SPAM1P38567 509 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 HTR2BP41595 481 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 KCNJ3P48549 501 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 RAB25P57735 213 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 VBP1P61758 197 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 B2MP61769 119 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 KDSRQ06136 332 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 MAPRE2Q15555 327 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 LUZP6Q538Z0 58 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 KLHL12Q53G59 568 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 OR10J3Q5JRS4 329 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 TEX30Q5JUR7 227 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 MFSD14CQ5VZR4 134 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 GUSBP11Q6P575 273 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 TRMT10CQ7L0Y3 403 aaKnown RBP1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 LRRC6Q86X45 466 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 ERO1BQ86YB8 467 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 BBS7Q8IWZ6 715 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 GAPTQ8N292 157 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 LRRC52Q8N7C0 313 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 ZNF565Q8N9K5 539 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 OR4K2Q8NGD2 314 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 BLNKQ8WV28 456 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 FRZBQ92765 325 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 CCDC127Q96BQ5 260 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 SNF8Q96H20 258 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 FMC1Q96HJ9 113 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 FOPNLQ96NB1 174 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 GPR82Q96P67 336 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 QKIQ96PU8 341 aaKnown RBP eCLIP1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 OR2M4Q96R27 311 aa1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 LLPHQ9BRT6 129 aaKnown RBP1.98□□□□□ -2.09
SHCBP1-202ENST00000563219 MRPL20Q9BYC9 149 aaKnown RBP1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms