RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 PGGT1BP53609 377 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 CST9LP1Q5W188 147 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 TRNP1Q6NT89 227 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 ZNF66Q6ZN08 573 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 ZNF611Q8N823 705 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 OR10S1Q8NGN2 331 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 RASL10BQ96S79 203 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 NRTNQ99748 197 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 SLC25A21Q9BQT8 299 aaPredicted RBP8.25□□□□□ -1.09
CDH1-205ENST00000562836 SLC52A3Q9NQ40 469 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 COMMD9Q9P000 198 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 WSB1Q9Y6I7 421 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 YDJCA8MPS7 323 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 RHOCP08134 193 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 LYL1P12980 280 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 FUT3P21217 361 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 TIA1P31483 386 aaKnown RBP eCLIP8.24□□□□□ -1.09
CDH1-205ENST00000562836 CLDN15P56746 228 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 GNB2P62879 340 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 FOXE3Q13461 319 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 SLC25A35Q3KQZ1 300 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 ANXA2RQ3ZCQ2 193 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 TRMT12Q53H54 448 aaKnown RBP8.24□□□□□ -1.09
CDH1-205ENST00000562836 OR5A2Q8NGI9 324 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 OR4L1Q8NH43 312 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 C16orf52Q8NHV5 167 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 ZNF775Q96BV0 537 aaPredicted RBP8.24□□□□□ -1.09
CDH1-205ENST00000562836 SCNM1Q9BWG6 230 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 KLK11Q9UBX7 282 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 FBXO4Q9UKT5 387 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 RARRES3Q9UL19 164 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 SIGLEC7Q9Y286 467 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 EP400Q96L91 3159 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 HIDE1A8MVS5 230 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 F8VVB4 439 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 F8VWA3 439 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 PYCARD-AS1I3L0S3 204 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 TRAF3IP2O43734 574 aaPredicted RBP8.24□□□□□ -1.09
CDH1-205ENST00000562836 HLA-HP01893 362 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 TYMSP04818 313 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 ERGP11308 486 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 BSGP35613 385 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 OR3A4PP47883 348 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 EFNB3Q15768 340 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 MPV17LQ2QL34 196 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 MBNL2Q5VZF2 373 aaKnown RBP8.24□□□□□ -1.09
CDH1-205ENST00000562836 RHBDD2Q6NTF9 364 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 SLC23A3Q6PIS1 610 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 GLIPR1L1Q6UWM5 242 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 SYT12Q8IV01 421 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 SLAMF6Q96DU3 332 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 NEIL1Q96FI4 390 aaPredicted RBP8.24□□□□□ -1.09
CDH1-205ENST00000562836 SLC35B3Q9H1N7 401 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 FNDC4Q9H6D8 234 aaPredicted RBP8.24□□□□□ -1.09
CDH1-205ENST00000562836 TMEM106BQ9NUM4 274 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 CLN6Q9NWW5 311 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 DKK4Q9UBT3 224 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 CDC42EP3Q9UKI2 254 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 MRPS16Q9Y3D3 137 aaKnown RBP8.24□□□□□ -1.09
CDH1-205ENST00000562836 ZNF780BQ9Y6R6 833 aa8.24□□□□□ -1.09
CDH1-205ENST00000562836 TEX48A0A1B0GUV7 120 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 IFITM5A6NNB3 132 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 NRG2O14511 850 aaPredicted RBP8.23□□□□□ -1.09
CDH1-205ENST00000562836 MSTNO14793 375 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 DUS4LO95620 317 aaKnown RBP8.23□□□□□ -1.09
CDH1-205ENST00000562836 ADH4P08319 380 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 FURINP09958 794 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 TCN2P20062 427 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 NTF3P20783 257 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 SAT1P21673 171 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 SUMO1P63165 101 aaKnown RBP8.23□□□□□ -1.09
CDH1-205ENST00000562836 SELENOWP63302 87 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 CSRP2Q16527 193 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 ABHD17CQ6PCB6 329 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 Q6ZSR9 355 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 SLC36A1Q7Z2H8 476 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 MARCH9Q86YJ5 346 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 PAQR4Q8N4S7 273 aaPredicted RBP8.23□□□□□ -1.09
CDH1-205ENST00000562836 SUSD6Q92537 303 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 IMP4Q96G21 291 aaKnown RBP8.23□□□□□ -1.09
CDH1-205ENST00000562836 ACY3Q96HD9 319 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 POPDC3Q9HBV1 291 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 MRPS28Q9Y2Q9 187 aaKnown RBP8.23□□□□□ -1.09
CDH1-205ENST00000562836 SBF2Q86WG5 1849 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 A0A087WWC5 75 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 MAP1LC3B2A6NCE7 125 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 H3BML4 177 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 PLPP3O14495 311 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 HMGB3O15347 200 aaKnown RBP8.23□□□□□ -1.09
CDH1-205ENST00000562836 FOXH1O75593 365 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 DXOO77932 396 aaKnown RBP8.23□□□□□ -1.09
CDH1-205ENST00000562836 HOXB9P17482 250 aaPredicted RBP8.23□□□□□ -1.09
CDH1-205ENST00000562836 HRH1P35367 487 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 GLIPR1P48060 266 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 SLC35A1P78382 337 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 INSL4Q14641 139 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 HIST3H3Q16695 136 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 TIMM23BQ5SRD1 257 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 Q6ZRG5 221 aa8.23□□□□□ -1.09
CDH1-205ENST00000562836 CLEC14AQ86T13 490 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms