RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 MED30Q96HR3 178 aa13.72□□□□□ -0.21
CDT1-202ENST00000562747 NRIP2Q9BQI9 281 aa13.72□□□□□ -0.21
CDT1-202ENST00000562747 RASSF4Q9H2L5 321 aa13.72□□□□□ -0.21
CDT1-202ENST00000562747 CLEC2DQ9UHP7 191 aa13.72□□□□□ -0.21
CDT1-202ENST00000562747 PKD1L1Q8TDX9 2849 aa13.71□□□□□ -0.21
CDT1-202ENST00000562747 IGKV1-27A0A075B6S5 117 aa13.71□□□□□ -0.21
CDT1-202ENST00000562747 IGKV1-9A0A0C4DH69 117 aa13.71□□□□□ -0.21
CDT1-202ENST00000562747 SIGLEC5O15389 551 aa13.71□□□□□ -0.21
CDT1-202ENST00000562747 OGG1O15527 345 aa13.71□□□□□ -0.21
CDT1-202ENST00000562747 FCN3O75636 299 aa13.71□□□□□ -0.21
CDT1-202ENST00000562747 MT-ND2P03891 347 aa13.71□□□□□ -0.21
CDT1-202ENST00000562747 PSG2P11465 335 aa13.71□□□□□ -0.21
CDT1-202ENST00000562747 AZGP1P25311 298 aaKnown RBP13.71□□□□□ -0.21
CDT1-202ENST00000562747 HSPA13P48723 471 aa13.71□□□□□ -0.21
CDT1-202ENST00000562747 ATP1B3P54709 279 aa13.71□□□□□ -0.21
CDT1-202ENST00000562747 IL13RA1P78552 427 aa13.71□□□□□ -0.21
CDT1-202ENST00000562747 ARMCX4Q5H9R4 360 aa13.71□□□□□ -0.21
CDT1-202ENST00000562747 XAF1Q6GPH4 301 aa13.71□□□□□ -0.21
CDT1-202ENST00000562747 LHFPL2Q6ZUX7 228 aa13.71□□□□□ -0.21
CDT1-202ENST00000562747 USP43Q70EL4 1123 aa13.71□□□□□ -0.21
CDT1-202ENST00000562747 AHSA2Q719I0 299 aa13.71□□□□□ -0.21
CDT1-202ENST00000562747 ANGPTL5Q86XS5 388 aa13.71□□□□□ -0.21
CDT1-202ENST00000562747 SERPINA12Q8IW75 414 aa13.71□□□□□ -0.21
CDT1-202ENST00000562747 STX19Q8N4C7 294 aa13.71□□□□□ -0.21
CDT1-202ENST00000562747 PARP16Q8N5Y8 322 aa13.71□□□□□ -0.21
CDT1-202ENST00000562747 FAM216BQ8N7L0 139 aa13.71□□□□□ -0.21
CDT1-202ENST00000562747 PNLDC1Q8NA58 520 aaKnown RBP13.71□□□□□ -0.21
CDT1-202ENST00000562747 GATAD2BQ8WXI9 593 aa13.71□□□□□ -0.21
CDT1-202ENST00000562747 ST8SIA4Q92187 359 aa13.71□□□□□ -0.21
CDT1-202ENST00000562747 GAFA1Q96PS6 74 aa13.71□□□□□ -0.21
CDT1-202ENST00000562747 NEK6Q9HC98 313 aa13.71□□□□□ -0.21
CDT1-202ENST00000562747 HES4Q9HCC6 221 aa13.71□□□□□ -0.21
CDT1-202ENST00000562747 ESM1Q9NQ30 184 aa13.71□□□□□ -0.21
CDT1-202ENST00000562747 FKBP14Q9NWM8 211 aa13.71□□□□□ -0.21
CDT1-202ENST00000562747 ZNF222Q9UK12 451 aa13.71□□□□□ -0.21
CDT1-202ENST00000562747 DHDHQ9UQ10 334 aa13.71□□□□□ -0.21
CDT1-202ENST00000562747 IGKV1D-17A0A075B6S4 117 aa13.7□□□□□ -0.22
CDT1-202ENST00000562747 A0A1B0GW55 424 aa13.7□□□□□ -0.22
CDT1-202ENST00000562747 ALX3O95076 343 aa13.7□□□□□ -0.22
CDT1-202ENST00000562747 NXPH2O95156 264 aa13.7□□□□□ -0.22
CDT1-202ENST00000562747 ATP6V1G2O95670 118 aa13.7□□□□□ -0.22
CDT1-202ENST00000562747 OCM2P0CE71 109 aa13.7□□□□□ -0.22
CDT1-202ENST00000562747 OCMP0CE72 109 aaPredicted RBP13.7□□□□□ -0.22
CDT1-202ENST00000562747 DUX4L2P0CJ85 424 aa13.7□□□□□ -0.22
CDT1-202ENST00000562747 DUX4L3P0CJ86 424 aa13.7□□□□□ -0.22
CDT1-202ENST00000562747 DUX4L4P0CJ87 422 aa13.7□□□□□ -0.22
CDT1-202ENST00000562747 DUX4L5P0CJ88 424 aa13.7□□□□□ -0.22
CDT1-202ENST00000562747 DUX4L6P0CJ89 424 aa13.7□□□□□ -0.22
CDT1-202ENST00000562747 DUX4L7P0CJ90 424 aa13.7□□□□□ -0.22
CDT1-202ENST00000562747 MYF6P23409 242 aa13.7□□□□□ -0.22
CDT1-202ENST00000562747 GABRA2P47869 451 aa13.7□□□□□ -0.22
CDT1-202ENST00000562747 ERVK11-1P61568 191 aa13.7□□□□□ -0.22
CDT1-202ENST00000562747 IKZF1Q13422 519 aa13.7□□□□□ -0.22
CDT1-202ENST00000562747 C6orf141Q5SZD1 244 aa13.7□□□□□ -0.22
CDT1-202ENST00000562747 DUX4L9Q6RFH8 374 aaPredicted RBP13.7□□□□□ -0.22
CDT1-202ENST00000562747 BTN2A1Q7KYR7 527 aa13.7□□□□□ -0.22
CDT1-202ENST00000562747 ZNF485Q8NCK3 441 aa13.7□□□□□ -0.22
CDT1-202ENST00000562747 OR5D14Q8NGL3 314 aa13.7□□□□□ -0.22
CDT1-202ENST00000562747 SGMS2Q8NHU3 365 aa13.7□□□□□ -0.22
CDT1-202ENST00000562747 TSEN15Q8WW01 171 aaKnown RBP13.7□□□□□ -0.22
CDT1-202ENST00000562747 UPRTQ96BW1 309 aa13.7□□□□□ -0.22
CDT1-202ENST00000562747 SMIM19Q96E16 107 aa13.7□□□□□ -0.22
CDT1-202ENST00000562747 SDSLQ96GA7 329 aa13.7□□□□□ -0.22
CDT1-202ENST00000562747 DMRTB1Q96MA1 342 aa13.7□□□□□ -0.22
CDT1-202ENST00000562747 ZNF488Q96MN9 340 aa13.7□□□□□ -0.22
CDT1-202ENST00000562747 OPALINQ96PE5 141 aa13.7□□□□□ -0.22
CDT1-202ENST00000562747 SLC6A7Q99884 636 aa13.7□□□□□ -0.22
CDT1-202ENST00000562747 ANKRD60Q9BZ19 345 aa13.7□□□□□ -0.22
CDT1-202ENST00000562747 ZCCHC4Q9H5U6 513 aa13.7□□□□□ -0.22
CDT1-202ENST00000562747 DUX4Q9UBX2 424 aa13.7□□□□□ -0.22
CDT1-202ENST00000562747 RPUSD1Q9UJJ7 312 aaKnown RBP13.7□□□□□ -0.22
CDT1-202ENST00000562747 TRIM77I1YAP6 450 aa13.69□□□□□ -0.22
CDT1-202ENST00000562747 SLC1A7O00341 560 aa13.69□□□□□ -0.22
CDT1-202ENST00000562747 C21orf33P30042 268 aaPredicted RBP13.69□□□□□ -0.22
CDT1-202ENST00000562747 MTCP1P56278 107 aa13.69□□□□□ -0.22
CDT1-202ENST00000562747 CAV3P56539 151 aa13.69□□□□□ -0.22
CDT1-202ENST00000562747 TAS2R43P59537 309 aa13.69□□□□□ -0.22
CDT1-202ENST00000562747 AWAT1Q58HT5 328 aa13.69□□□□□ -0.22
CDT1-202ENST00000562747 IZUMO2Q6UXV1 221 aa13.69□□□□□ -0.22
CDT1-202ENST00000562747 MKXQ8IYA7 352 aa13.69□□□□□ -0.22
CDT1-202ENST00000562747 Q8IYB0 196 aa13.69□□□□□ -0.22
CDT1-202ENST00000562747 OR13C9Q8NGT0 318 aa13.69□□□□□ -0.22
CDT1-202ENST00000562747 GPR148Q8TDV2 347 aa13.69□□□□□ -0.22
CDT1-202ENST00000562747 CEP19Q96LK0 163 aa13.69□□□□□ -0.22
CDT1-202ENST00000562747 SCN3BQ9NY72 215 aa13.69□□□□□ -0.22
CDT1-202ENST00000562747 MTCH1Q9NZJ7 389 aa13.69□□□□□ -0.22
CDT1-202ENST00000562747 SLC25A10Q9UBX3 287 aaPredicted RBP13.69□□□□□ -0.22
CDT1-202ENST00000562747 NUP50Q9UKX7 468 aa13.69□□□□□ -0.22
CDT1-202ENST00000562747 RFPL4AA6NLU0 287 aa13.68□□□□□ -0.22
CDT1-202ENST00000562747 ZNF879B4DU55 563 aa13.68□□□□□ -0.22
CDT1-202ENST00000562747 RFPL4AL1F8VTS6 287 aa13.68□□□□□ -0.22
CDT1-202ENST00000562747 MYL12BO14950 172 aa13.68□□□□□ -0.22
CDT1-202ENST00000562747 CYB5AP00167 134 aa13.68□□□□□ -0.22
CDT1-202ENST00000562747 LALBAP00709 142 aa13.68□□□□□ -0.22
CDT1-202ENST00000562747 KNG1P01042 644 aa13.68□□□□□ -0.22
CDT1-202ENST00000562747 CD2P06729 351 aa13.68□□□□□ -0.22
CDT1-202ENST00000562747 SELLP14151 372 aa13.68□□□□□ -0.22
CDT1-202ENST00000562747 WNT4P56705 351 aa13.68□□□□□ -0.22
CDT1-202ENST00000562747 FGF12P61328 243 aa13.68□□□□□ -0.22
CDT1-202ENST00000562747 DGUOKQ16854 277 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms