RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 GTF2A1P52655 376 aaPredicted RBP13.34□□□□□ -0.27
COMMD4-206ENST00000562610 ATP1B3P54709 279 aa13.34□□□□□ -0.27
COMMD4-206ENST00000562610 HILS1P60008 231 aa13.34□□□□□ -0.27
COMMD4-206ENST00000562610 MED21Q13503 144 aa13.34□□□□□ -0.27
COMMD4-206ENST00000562610 C11orf91Q3C1V1 193 aa13.34□□□□□ -0.27
COMMD4-206ENST00000562610 OR2G6Q5TZ20 316 aa13.34□□□□□ -0.27
COMMD4-206ENST00000562610 GPR157Q5UAW9 335 aa13.34□□□□□ -0.27
COMMD4-206ENST00000562610 RBMS3Q6XE24 437 aaKnown RBP13.34□□□□□ -0.27
COMMD4-206ENST00000562610 TMPRSS11AQ6ZMR5 421 aa13.34□□□□□ -0.27
COMMD4-206ENST00000562610 SLC25A26Q70HW3 274 aa13.34□□□□□ -0.27
COMMD4-206ENST00000562610 BCL6BQ8N143 479 aaPredicted RBP13.34□□□□□ -0.27
COMMD4-206ENST00000562610 ZNRF1Q8ND25 227 aa13.34□□□□□ -0.27
COMMD4-206ENST00000562610 OR13C9Q8NGT0 318 aa13.34□□□□□ -0.27
COMMD4-206ENST00000562610 HAVCR2Q8TDQ0 301 aa13.34□□□□□ -0.27
COMMD4-206ENST00000562610 SLAMF9Q96A28 289 aa13.34□□□□□ -0.27
COMMD4-206ENST00000562610 WDFY2Q96P53 400 aa13.34□□□□□ -0.27
COMMD4-206ENST00000562610 JMJD8Q96S16 334 aa13.34□□□□□ -0.27
COMMD4-206ENST00000562610 PDCD1LG2Q9BQ51 273 aa13.34□□□□□ -0.27
COMMD4-206ENST00000562610 NRIP2Q9BQI9 281 aa13.34□□□□□ -0.27
COMMD4-206ENST00000562610 ELL3Q9HB65 397 aaPredicted RBP13.34□□□□□ -0.27
COMMD4-206ENST00000562610 ZNF222Q9UK12 451 aa13.34□□□□□ -0.27
COMMD4-206ENST00000562610 DIMT1Q9UNQ2 313 aaKnown RBP13.34□□□□□ -0.27
COMMD4-206ENST00000562610 CAB39Q9Y376 341 aaPredicted RBP13.34□□□□□ -0.27
COMMD4-206ENST00000562610 EXOSC1Q9Y3B2 195 aaKnown RBP13.34□□□□□ -0.27
COMMD4-206ENST00000562610 COL6A5A8TX70 2615 aa13.33□□□□□ -0.28
COMMD4-206ENST00000562610 A0A1W2PQ09 198 aa13.33□□□□□ -0.28
COMMD4-206ENST00000562610 RFPL4AA6NLU0 287 aa13.33□□□□□ -0.28
COMMD4-206ENST00000562610 RFPL4AL1F8VTS6 287 aa13.33□□□□□ -0.28
COMMD4-206ENST00000562610 H0YHG0 523 aa13.33□□□□□ -0.28
COMMD4-206ENST00000562610 SLC1A7O00341 560 aa13.33□□□□□ -0.28
COMMD4-206ENST00000562610 GPR37O15354 613 aa13.33□□□□□ -0.28
COMMD4-206ENST00000562610 MTCP1P56278 107 aa13.33□□□□□ -0.28
COMMD4-206ENST00000562610 ARF6P62330 175 aa13.33□□□□□ -0.28
COMMD4-206ENST00000562610 BRD3OSQ6XYD6 125 aa13.33□□□□□ -0.28
COMMD4-206ENST00000562610 USP43Q70EL4 1123 aa13.33□□□□□ -0.28
COMMD4-206ENST00000562610 UTS2BQ765I0 119 aa13.33□□□□□ -0.28
COMMD4-206ENST00000562610 EGFL6Q8IUX8 553 aa13.33□□□□□ -0.28
COMMD4-206ENST00000562610 SIGLECL1Q8N7X8 197 aa13.33□□□□□ -0.28
COMMD4-206ENST00000562610 TMEM80Q96HE8 168 aa13.33□□□□□ -0.28
COMMD4-206ENST00000562610 CEP19Q96LK0 163 aa13.33□□□□□ -0.28
COMMD4-206ENST00000562610 OPALINQ96PE5 141 aa13.33□□□□□ -0.28
COMMD4-206ENST00000562610 TBX15Q96SF7 602 aa13.33□□□□□ -0.28
COMMD4-206ENST00000562610 DCTN5Q9BTE1 182 aa13.33□□□□□ -0.28
COMMD4-206ENST00000562610 CHCHD3Q9NX63 227 aaKnown RBP13.33□□□□□ -0.28
COMMD4-206ENST00000562610 DHDHQ9UQ10 334 aa13.33□□□□□ -0.28
COMMD4-206ENST00000562610 IGKV1-9A0A0C4DH69 117 aa13.32□□□□□ -0.28
COMMD4-206ENST00000562610 XPNPEP2O43895 674 aa13.32□□□□□ -0.28
COMMD4-206ENST00000562610 NOS1APO75052 506 aaPredicted RBP13.32□□□□□ -0.28
COMMD4-206ENST00000562610 CYB5AP00167 134 aa13.32□□□□□ -0.28
COMMD4-206ENST00000562610 RPSAP08865 295 aaKnown RBP13.32□□□□□ -0.28
COMMD4-206ENST00000562610 MMP9P14780 707 aa13.32□□□□□ -0.28
COMMD4-206ENST00000562610 PRKACBP22694 351 aa13.32□□□□□ -0.28
COMMD4-206ENST00000562610 AQP4P55087 323 aa13.32□□□□□ -0.28
COMMD4-206ENST00000562610 CAV3P56539 151 aa13.32□□□□□ -0.28
COMMD4-206ENST00000562610 CDK5R1Q15078 307 aa13.32□□□□□ -0.28
COMMD4-206ENST00000562610 XAF1Q6GPH4 301 aa13.32□□□□□ -0.28
COMMD4-206ENST00000562610 LHFPL2Q6ZUX7 228 aa13.32□□□□□ -0.28
COMMD4-206ENST00000562610 AHSA2Q719I0 299 aa13.32□□□□□ -0.28
COMMD4-206ENST00000562610 CMTM4Q8IZR5 234 aa13.32□□□□□ -0.28
COMMD4-206ENST00000562610 DNAAF1Q8NEP3 725 aa13.32□□□□□ -0.28
COMMD4-206ENST00000562610 RFT1Q96AA3 541 aa13.32□□□□□ -0.28
COMMD4-206ENST00000562610 SPSB1Q96BD6 273 aa13.32□□□□□ -0.28
COMMD4-206ENST00000562610 SIRPDQ9H106 197 aa13.32□□□□□ -0.28
COMMD4-206ENST00000562610 CNTD2Q9H8S5 307 aa13.32□□□□□ -0.28
COMMD4-206ENST00000562610 HES4Q9HCC6 221 aa13.32□□□□□ -0.28
COMMD4-206ENST00000562610 MAB21L2Q9Y586 359 aa13.32□□□□□ -0.28
COMMD4-206ENST00000562610 EFCAB10A6NFE3 127 aa13.31□□□□□ -0.28
COMMD4-206ENST00000562610 TRIM77I1YAP6 450 aa13.31□□□□□ -0.28
COMMD4-206ENST00000562610 HCKP08631 526 aa13.31□□□□□ -0.28
COMMD4-206ENST00000562610 PIPP12273 146 aaPredicted RBP13.31□□□□□ -0.28
COMMD4-206ENST00000562610 ST3GAL4Q11206 333 aa13.31□□□□□ -0.28
COMMD4-206ENST00000562610 RUSC1-AS1Q66K80 236 aa13.31□□□□□ -0.28
COMMD4-206ENST00000562610 RPL22L1Q6P5R6 122 aaKnown RBP13.31□□□□□ -0.28
COMMD4-206ENST00000562610 VMO1Q7Z5L0 202 aa13.31□□□□□ -0.28
COMMD4-206ENST00000562610 ZNF561Q8N587 486 aa13.31□□□□□ -0.28
COMMD4-206ENST00000562610 CD177Q8N6Q3 437 aa13.31□□□□□ -0.28
COMMD4-206ENST00000562610 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.31□□□□□ -0.28
COMMD4-206ENST00000562610 LY6G5BQ8NDX9 201 aa13.31□□□□□ -0.28
COMMD4-206ENST00000562610 BPIFB6Q8NFQ5 453 aa13.31□□□□□ -0.28
COMMD4-206ENST00000562610 SPATA3Q8NHX4 192 aa13.31□□□□□ -0.28
COMMD4-206ENST00000562610 NRG4Q8WWG1 115 aa13.31□□□□□ -0.28
COMMD4-206ENST00000562610 TFAP2CQ92754 450 aa13.31□□□□□ -0.28
COMMD4-206ENST00000562610 GGHQ92820 318 aa13.31□□□□□ -0.28
COMMD4-206ENST00000562610 EMG1Q92979 244 aaKnown RBP13.31□□□□□ -0.28
COMMD4-206ENST00000562610 LHX4Q969G2 390 aa13.31□□□□□ -0.28
COMMD4-206ENST00000562610 SDSLQ96GA7 329 aa13.31□□□□□ -0.28
COMMD4-206ENST00000562610 SPACA5Q96QH8 159 aa13.31□□□□□ -0.28
COMMD4-206ENST00000562610 ZCCHC4Q9H5U6 513 aa13.31□□□□□ -0.28
COMMD4-206ENST00000562610 NEK6Q9HC98 313 aa13.31□□□□□ -0.28
COMMD4-206ENST00000562610 MTCH1Q9NZJ7 389 aa13.31□□□□□ -0.28
COMMD4-206ENST00000562610 CLEC2DQ9UHP7 191 aa13.31□□□□□ -0.28
COMMD4-206ENST00000562610 KPTNQ9Y664 436 aa13.31□□□□□ -0.28
COMMD4-206ENST00000562610 F8VVB4 439 aa13.3□□□□□ -0.28
COMMD4-206ENST00000562610 F8VWA3 439 aa13.3□□□□□ -0.28
COMMD4-206ENST00000562610 SPRY1O43609 319 aaPredicted RBP13.3□□□□□ -0.28
COMMD4-206ENST00000562610 KNG1P01042 644 aa13.3□□□□□ -0.28
COMMD4-206ENST00000562610 PRDX2P32119 198 aa13.3□□□□□ -0.28
COMMD4-206ENST00000562610 SOX2P48431 317 aa13.3□□□□□ -0.28
COMMD4-206ENST00000562610 ERVK11-1P61568 191 aa13.3□□□□□ -0.28
COMMD4-206ENST00000562610 ACTG1P63261 375 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms