RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 WDR76Q9H967 626 aa16.41■□□□□ 0.22
RAB40C-206ENST00000561781 TAS2R4Q9NYW5 299 aa16.41■□□□□ 0.22
RAB40C-206ENST00000561781 SLC22A13Q9Y226 551 aa16.41■□□□□ 0.22
RAB40C-206ENST00000561781 A0A0U1RQV5 110 aa16.41■□□□□ 0.22
RAB40C-206ENST00000561781 TDGF1P13385 188 aa16.41■□□□□ 0.22
RAB40C-206ENST00000561781 FSTP19883 344 aa16.41■□□□□ 0.22
RAB40C-206ENST00000561781 MDKP21741 143 aaPredicted RBP16.41■□□□□ 0.22
RAB40C-206ENST00000561781 METAP1P53582 386 aa16.41■□□□□ 0.22
RAB40C-206ENST00000561781 HIST1H3AP68431 136 aa16.41■□□□□ 0.22
RAB40C-206ENST00000561781 FDX2Q6P4F2 183 aa16.41■□□□□ 0.22
RAB40C-206ENST00000561781 TGIF2LYQ8IUE0 185 aa16.41■□□□□ 0.22
RAB40C-206ENST00000561781 ALKBH7Q9BT30 221 aaPredicted RBP16.41■□□□□ 0.22
RAB40C-206ENST00000561781 LANCL2Q9NS86 450 aa16.41■□□□□ 0.22
RAB40C-206ENST00000561781 TMEM14AQ9Y6G1 99 aa16.41■□□□□ 0.22
RAB40C-206ENST00000561781 ZNF705FA8MVS1 300 aaPredicted RBP16.4■□□□□ 0.22
RAB40C-206ENST00000561781 ZNF705DP0CH99 300 aaPredicted RBP16.4■□□□□ 0.22
RAB40C-206ENST00000561781 ZNF705BP0CI00 300 aaPredicted RBP16.4■□□□□ 0.22
RAB40C-206ENST00000561781 ALOX5APP20292 161 aa16.4■□□□□ 0.22
RAB40C-206ENST00000561781 TFPI2P48307 235 aa16.4■□□□□ 0.22
RAB40C-206ENST00000561781 C16orf54Q6UWD8 224 aa16.4■□□□□ 0.22
RAB40C-206ENST00000561781 OR5L2Q8NGL0 311 aa16.4■□□□□ 0.22
RAB40C-206ENST00000561781 TMEM170AQ8WVE7 144 aa16.4■□□□□ 0.22
RAB40C-206ENST00000561781 TECTBQ96PL2 329 aa16.4■□□□□ 0.22
RAB40C-206ENST00000561781 PARD6GQ9BYG4 376 aaPredicted RBP16.4■□□□□ 0.22
RAB40C-206ENST00000561781 PLSCR2Q9NRY7 297 aa16.4■□□□□ 0.22
RAB40C-206ENST00000561781 CDC14CA4D256 554 aa16.4■□□□□ 0.22
RAB40C-206ENST00000561781 A8MVM7 634 aa16.4■□□□□ 0.22
RAB40C-206ENST00000561781 H7C1C5 153 aa16.4■□□□□ 0.22
RAB40C-206ENST00000561781 LCN6P62502 163 aa16.4■□□□□ 0.22
RAB40C-206ENST00000561781 PLXDC2Q6UX71 529 aa16.4■□□□□ 0.22
RAB40C-206ENST00000561781 CSNK1A1LQ8N752 337 aa16.4■□□□□ 0.22
RAB40C-206ENST00000561781 HAS2Q92819 552 aa16.4■□□□□ 0.22
RAB40C-206ENST00000561781 TBX15Q96SF7 602 aa16.4■□□□□ 0.22
RAB40C-206ENST00000561781 IGFBP3P17936 291 aaPredicted RBP16.39■□□□□ 0.21
RAB40C-206ENST00000561781 PI3P19957 117 aa16.39■□□□□ 0.21
RAB40C-206ENST00000561781 GALNSP34059 522 aa16.39■□□□□ 0.21
RAB40C-206ENST00000561781 ID2Q02363 134 aa16.39■□□□□ 0.21
RAB40C-206ENST00000561781 PCK2Q16822 640 aa16.39■□□□□ 0.21
RAB40C-206ENST00000561781 C1orf100Q5SVJ3 147 aa16.39■□□□□ 0.21
RAB40C-206ENST00000561781 OR5T1Q8NG75 326 aa16.39■□□□□ 0.21
RAB40C-206ENST00000561781 GPR119Q8TDV5 335 aa16.39■□□□□ 0.21
RAB40C-206ENST00000561781 RBMXL1Q96E39 390 aaKnown RBP16.39■□□□□ 0.21
RAB40C-206ENST00000561781 DNAJB12Q9NXW2 375 aaKnown RBP16.39■□□□□ 0.21
RAB40C-206ENST00000561781 SCN2AQ99250 2005 aa16.39■□□□□ 0.21
RAB40C-206ENST00000561781 CBY3A6NI87 242 aa16.39■□□□□ 0.21
RAB40C-206ENST00000561781 SPINT1O43278 529 aa16.39■□□□□ 0.21
RAB40C-206ENST00000561781 KLF8O95600 359 aaPredicted RBP16.39■□□□□ 0.21
RAB40C-206ENST00000561781 IFNA21P01568 189 aa16.39■□□□□ 0.21
RAB40C-206ENST00000561781 HOXC12P31275 282 aa16.39■□□□□ 0.21
RAB40C-206ENST00000561781 RBMXP38159 391 aaKnown RBP16.39■□□□□ 0.21
RAB40C-206ENST00000561781 OTPQ5XKR4 325 aa16.39■□□□□ 0.21
RAB40C-206ENST00000561781 ZNF880Q6PDB4 577 aa16.39■□□□□ 0.21
RAB40C-206ENST00000561781 PYGO2Q9BRQ0 406 aa16.39■□□□□ 0.21
RAB40C-206ENST00000561781 GPR35Q9HC97 309 aa16.39■□□□□ 0.21
RAB40C-206ENST00000561781 C19orf53Q9UNZ5 99 aaPredicted RBP16.39■□□□□ 0.21
RAB40C-206ENST00000561781 CACNA1IQ9P0X4 2223 aa16.38■□□□□ 0.21
RAB40C-206ENST00000561781 TMEM225BP0DP42 221 aa16.38■□□□□ 0.21
RAB40C-206ENST00000561781 PSG6Q00889 435 aa16.38■□□□□ 0.21
RAB40C-206ENST00000561781 ACOT6Q3I5F7 207 aaPredicted RBP16.38■□□□□ 0.21
RAB40C-206ENST00000561781 HSF4Q9ULV5 492 aa16.38■□□□□ 0.21
RAB40C-206ENST00000561781 SNRNP200O75643 2136 aaKnown RBP16.38■□□□□ 0.21
RAB40C-206ENST00000561781 FAM230AA0A1W2PPH8 454 aa16.38■□□□□ 0.21
RAB40C-206ENST00000561781 M0R296 226 aa16.38■□□□□ 0.21
RAB40C-206ENST00000561781 COL9A1P20849 921 aa16.38■□□□□ 0.21
RAB40C-206ENST00000561781 GABRA3P34903 492 aa16.38■□□□□ 0.21
RAB40C-206ENST00000561781 RPS4XP62701 263 aaKnown RBP16.38■□□□□ 0.21
RAB40C-206ENST00000561781 PRDX4Q13162 271 aa16.38■□□□□ 0.21
RAB40C-206ENST00000561781 UBE2V1Q13404 147 aa16.38■□□□□ 0.21
RAB40C-206ENST00000561781 NFATC4Q14934 902 aa16.38■□□□□ 0.21
RAB40C-206ENST00000561781 LCN10Q6JVE6 187 aa16.38■□□□□ 0.21
RAB40C-206ENST00000561781 GRINAQ7Z429 371 aa16.38■□□□□ 0.21
RAB40C-206ENST00000561781 RHBDD1Q8TEB9 315 aa16.38■□□□□ 0.21
RAB40C-206ENST00000561781 ASB5Q8WWX0 329 aa16.38■□□□□ 0.21
RAB40C-206ENST00000561781 ZNF700Q9H0M5 742 aa16.38■□□□□ 0.21
RAB40C-206ENST00000561781 TMEM238C9JI98 176 aa16.37■□□□□ 0.21
RAB40C-206ENST00000561781 DRD1P21728 446 aa16.37■□□□□ 0.21
RAB40C-206ENST00000561781 FAM3BP58499 235 aaPredicted RBP16.37■□□□□ 0.21
RAB40C-206ENST00000561781 ZNF117Q03924 483 aa16.37■□□□□ 0.21
RAB40C-206ENST00000561781 FHL5Q5TD97 284 aa16.37■□□□□ 0.21
RAB40C-206ENST00000561781 TMEM92Q6UXU6 159 aa16.37■□□□□ 0.21
RAB40C-206ENST00000561781 CCDC74BQ96LY2 380 aa16.37■□□□□ 0.21
RAB40C-206ENST00000561781 NUDT16L1Q9BRJ7 211 aaKnown RBP16.37■□□□□ 0.21
RAB40C-206ENST00000561781 ELOVL3Q9HB03 270 aa16.37■□□□□ 0.21
RAB40C-206ENST00000561781 SIT1Q9Y3P8 196 aa16.37■□□□□ 0.21
RAB40C-206ENST00000561781 AHSA1O95433 338 aa16.37■□□□□ 0.21
RAB40C-206ENST00000561781 PNPP00491 289 aa16.37■□□□□ 0.21
RAB40C-206ENST00000561781 TMEM183BQ1AE95 376 aa16.37■□□□□ 0.21
RAB40C-206ENST00000561781 FBXW12Q6X9E4 464 aa16.37■□□□□ 0.21
RAB40C-206ENST00000561781 RNF44Q7L0R7 432 aa16.37■□□□□ 0.21
RAB40C-206ENST00000561781 CDRT4Q8N9R6 151 aa16.37■□□□□ 0.21
RAB40C-206ENST00000561781 OR2D3Q8NGH3 330 aa16.37■□□□□ 0.21
RAB40C-206ENST00000561781 OR1L6Q8NGR2 347 aa16.37■□□□□ 0.21
RAB40C-206ENST00000561781 SLC25A44Q96H78 314 aaPredicted RBP16.37■□□□□ 0.21
RAB40C-206ENST00000561781 GPX7Q96SL4 187 aaPredicted RBP16.37■□□□□ 0.21
RAB40C-206ENST00000561781 AK3Q9UIJ7 227 aa16.37■□□□□ 0.21
RAB40C-206ENST00000561781 RPH3ALQ9UNE2 315 aa16.37■□□□□ 0.21
RAB40C-206ENST00000561781 CLDN16Q9Y5I7 305 aa16.37■□□□□ 0.21
RAB40C-206ENST00000561781 MUC22E2RYF6 1773 aaPredicted RBP16.36■□□□□ 0.21
RAB40C-206ENST00000561781 CHD3Q12873 2000 aaKnown RBP16.36■□□□□ 0.21
RAB40C-206ENST00000561781 SCGB1D2O95969 90 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms