RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 AQP12AQ8IXF9 295 aa7.48□□□□□ -1.21
HERC1-210ENST00000560897 ZNF676Q8N7Q3 588 aa7.48□□□□□ -1.21
HERC1-210ENST00000560897 CSNK2A3Q8NEV1 391 aa7.48□□□□□ -1.21
HERC1-210ENST00000560897 OR11H1Q8NG94 326 aa7.48□□□□□ -1.21
HERC1-210ENST00000560897 GON7Q9BXV9 100 aa7.48□□□□□ -1.21
HERC1-210ENST00000560897 PNRC2Q9NPJ4 139 aaKnown RBP7.48□□□□□ -1.21
HERC1-210ENST00000560897 GMPR2Q9P2T1 348 aaKnown RBP7.48□□□□□ -1.21
HERC1-210ENST00000560897 LINC00527Q9UJ94 153 aa7.48□□□□□ -1.21
HERC1-210ENST00000560897 ZNF222Q9UK12 451 aa7.48□□□□□ -1.21
HERC1-210ENST00000560897 IGHV2-26A0A0B4J1V2 119 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 DHRS12A0PJE2 317 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 RFPL4AA6NLU0 287 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 RFPL4AL1F8VTS6 287 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 CCRL2O00421 344 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 IMPA2O14732 288 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 SLC2A1P11166 492 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 ZNF823P16415 610 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 TNFRSF1BP20333 461 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 CFL1P23528 166 aaKnown RBP7.47□□□□□ -1.21
HERC1-210ENST00000560897 RRM2P31350 389 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 IFNGR2P38484 337 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 YAP1P46937 504 aaKnown RBP7.47□□□□□ -1.21
HERC1-210ENST00000560897 RPS6KA3P51812 740 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 PRKXP51817 358 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 MS4A2Q01362 244 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 ZBED5Q49AG3 693 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 ASRGL1Q7L266 308 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 SLC16A9Q7RTY1 509 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 SLC35E3Q7Z769 313 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 VTCN1Q7Z7D3 282 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 LYPD6Q86Y78 171 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 EGFL6Q8IUX8 553 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 ZDHHC21Q8IVQ6 265 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 STPG2Q8N412 459 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 RPP25LQ8N5L8 163 aaKnown RBP7.47□□□□□ -1.21
HERC1-210ENST00000560897 ZNF671Q8TAW3 534 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 C4orf3Q8WVX3 66 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 REEP6Q96HR9 211 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 RNF170Q96K19 258 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 ZNF714Q96N38 554 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 TSSK2Q96PF2 358 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 HIST1H2AAQ96QV6 131 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 CLEC7AQ9BXN2 247 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 GHITMQ9H3K2 345 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 SP140LQ9H930 580 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 DPM3Q9P2X0 92 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 CYB5R1Q9UHQ9 305 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 RHBDD3Q9Y3P4 386 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 MPC1Q9Y5U8 109 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 ABCA13Q86UQ4 5058 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 TNCP24821 2201 aa7.47□□□□□ -1.21
HERC1-210ENST00000560897 OR6C68A6NDL8 312 aa7.46□□□□□ -1.22
HERC1-210ENST00000560897 E2F6O75461 281 aa7.46□□□□□ -1.22
HERC1-210ENST00000560897 KRT36O76013 467 aa7.46□□□□□ -1.22
HERC1-210ENST00000560897 NDUFB2O95178 105 aa7.46□□□□□ -1.22
HERC1-210ENST00000560897 RENP00797 406 aa7.46□□□□□ -1.22
HERC1-210ENST00000560897 CST1P01037 141 aa7.46□□□□□ -1.22
HERC1-210ENST00000560897 ANXA2P07355 339 aaKnown RBP7.46□□□□□ -1.22
HERC1-210ENST00000560897 FAM106CPP0CH98 169 aa7.46□□□□□ -1.22
HERC1-210ENST00000560897 MED14OSP0DP75 135 aa7.46□□□□□ -1.22
HERC1-210ENST00000560897 RAP2AP10114 183 aa7.46□□□□□ -1.22
HERC1-210ENST00000560897 RHCEP18577 417 aa7.46□□□□□ -1.22
HERC1-210ENST00000560897 CNTFRP26992 372 aa7.46□□□□□ -1.22
HERC1-210ENST00000560897 MNDAP41218 407 aa7.46□□□□□ -1.22
HERC1-210ENST00000560897 GPR4P46093 362 aa7.46□□□□□ -1.22
HERC1-210ENST00000560897 CDX1P47902 265 aaPredicted RBP7.46□□□□□ -1.22
HERC1-210ENST00000560897 DLX6P56179 175 aa7.46□□□□□ -1.22
HERC1-210ENST00000560897 EDDM3BP56851 147 aa7.46□□□□□ -1.22
HERC1-210ENST00000560897 FAM3AP98173 230 aa7.46□□□□□ -1.22
HERC1-210ENST00000560897 PRKCDQ05655 676 aa7.46□□□□□ -1.22
HERC1-210ENST00000560897 FHL3Q13643 280 aa7.46□□□□□ -1.22
HERC1-210ENST00000560897 TRAM2Q15035 370 aa7.46□□□□□ -1.22
HERC1-210ENST00000560897 PNLIPRP3Q17RR3 467 aa7.46□□□□□ -1.22
HERC1-210ENST00000560897 GFOD2Q3B7J2 385 aa7.46□□□□□ -1.22
HERC1-210ENST00000560897 ZNF730Q6ZMV8 503 aa7.46□□□□□ -1.22
HERC1-210ENST00000560897 PTCHD4Q6ZW05 846 aa7.46□□□□□ -1.22
HERC1-210ENST00000560897 SPSB4Q96A44 273 aa7.46□□□□□ -1.22
HERC1-210ENST00000560897 PRRC1Q96M27 445 aa7.46□□□□□ -1.22
HERC1-210ENST00000560897 ST6GALNAC5Q9BVH7 336 aa7.46□□□□□ -1.22
HERC1-210ENST00000560897 MAGIXQ9H6Y5 334 aa7.46□□□□□ -1.22
HERC1-210ENST00000560897 REEP1Q9H902 201 aa7.46□□□□□ -1.22
HERC1-210ENST00000560897 B9D1Q9UPM9 204 aa7.46□□□□□ -1.22
HERC1-210ENST00000560897 AP4S1Q9Y587 144 aa7.46□□□□□ -1.22
HERC1-210ENST00000560897 IER3IP1Q9Y5U9 82 aa7.46□□□□□ -1.22
HERC1-210ENST00000560897 SESN1Q9Y6P5 492 aa7.46□□□□□ -1.22
HERC1-210ENST00000560897 ZNF850A8MQ14 1090 aa7.45□□□□□ -1.22
HERC1-210ENST00000560897 A8MZ25 164 aa7.45□□□□□ -1.22
HERC1-210ENST00000560897 LEUTXA8MZ59 168 aa7.45□□□□□ -1.22
HERC1-210ENST00000560897 MTRF1O75570 445 aaKnown RBP7.45□□□□□ -1.22
HERC1-210ENST00000560897 GADD45GO95257 159 aa7.45□□□□□ -1.22
HERC1-210ENST00000560897 BAG2O95816 211 aa7.45□□□□□ -1.22
HERC1-210ENST00000560897 TK1P04183 234 aa7.45□□□□□ -1.22
HERC1-210ENST00000560897 H1F0P07305 194 aaKnown RBP7.45□□□□□ -1.22
HERC1-210ENST00000560897 FCGR1AP12314 374 aa7.45□□□□□ -1.22
HERC1-210ENST00000560897 ATP6V1B2P21281 511 aa7.45□□□□□ -1.22
HERC1-210ENST00000560897 FASP25445 335 aa7.45□□□□□ -1.22
HERC1-210ENST00000560897 PRDX2P32119 198 aa7.45□□□□□ -1.22
HERC1-210ENST00000560897 CEACAM3P40198 252 aa7.45□□□□□ -1.22
HERC1-210ENST00000560897 PRDX4Q13162 271 aa7.45□□□□□ -1.22
HERC1-210ENST00000560897 GPR50Q13585 617 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms