RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 UNC119Q13432 240 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 RUNX2Q13950 521 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 ZNF266Q14584 549 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 KIR2DS3Q14952 304 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 SLC9A3R2Q15599 337 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 USF2Q15853 346 aaPredicted RBP5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 ZNF77Q15935 545 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 TBR1Q16650 682 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 PCK2Q16822 640 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 IAH1Q2TAA2 248 aaPredicted RBP5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 ACSF3Q4G176 576 aaPredicted RBP5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 GAGE13Q4V321 117 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 DCAF10Q5QP82 559 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 PRR31Q5SQ13 230 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 ABLIM2Q6H8Q1 611 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 OR2T2Q6IF00 324 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 DNM1P34Q6PK57 102 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 SLC25A26Q70HW3 274 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 RTL10Q7L3V2 364 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 SLC16A14Q7RTX9 510 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 CACUL1Q86Y37 369 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 TGIF2LYQ8IUE0 185 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 SGPP2Q8IWX5 399 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 SLC39A11Q8N1S5 342 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 GVQW1Q8N7I0 195 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 AVL9Q8NBF6 648 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 CCDC54Q8NEL0 328 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 OR4D6Q8NGJ1 314 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 MFSD8Q8NHS3 518 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 ZNF519Q8TB69 540 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 ST7LQ8TDW4 575 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 ADAMTS18Q8TE60 1221 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 HIST1H2BLQ99880 126 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 NIPSNAP3BQ9BS92 247 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 URM1Q9BTM9 101 aaKnown RBP5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 GPR61Q9BZJ8 451 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 TBL1XR1Q9BZK7 514 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 ULBP3Q9BZM4 244 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 OR8D2Q9GZM6 311 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 SRD5A3Q9H8P0 318 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 CDH20Q9HBT6 801 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 Q9N2J8 555 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 PHPT1Q9NRX4 125 aaPredicted RBP5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 DECR2Q9NUI1 292 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 WSB2Q9NYS7 404 aaPredicted RBP5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 VAX2Q9UIW0 290 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 B9D1Q9UPM9 204 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 FBXO7Q9Y3I1 522 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 LRP12Q9Y561 859 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 SLCO1B1Q9Y6L6 691 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 SCN3AQ9NY46 2000 aa5.22□□□□□ -1.57
SNRPA1-209ENST00000560307 SCN5AQ14524 2016 aa5.21□□□□□ -1.57
SNRPA1-209ENST00000560307 TRAV1-1A0A0B4J248 108 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 KIR2DL5BA0A0G2JN68 375 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 KIR2DL5BA0A0G2JPC4 375 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 PRSS37A4D1T9 235 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 MANSC4A6NHS7 340 aaPredicted RBP5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 CRYM-AS1A6NIL9 109 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 NPIPB13A6NJU9 1138 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 B9A039 149 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 NPIPB4C9JG80 1138 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 CLDN34H7C241 214 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 MASP2O00187 686 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 CYR61O00622 381 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 DLEU1O43261 78 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 KCNAB3O43448 404 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 LATO43561 262 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 FGF17O60258 216 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 PITX3O75364 302 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 ACTL6BO94805 426 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 SCAF4O95104 1147 aaKnown RBP5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 PNPP00491 289 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 PRH1P02810 166 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 TK1P04183 234 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 APODP05090 189 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 CISD3P0C7P0 127 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 MED14OSP0DP75 135 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 GZMBP10144 247 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 CEACAM1P13688 526 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 MMP9P14780 707 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 FABP4P15090 132 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 GALNSP34059 522 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 PTGER4P35408 488 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 OR3A2P47893 321 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 NOVA1P51513 510 aaKnown RBP5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 CCR4P51679 360 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 EMP2P54851 167 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 RPL27P61353 136 aaKnown RBP5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 PSG6Q00889 435 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 RPL18Q07020 188 aaKnown RBP5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 SGCGQ13326 291 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 MRPL49Q13405 166 aaKnown RBP5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 ELAVL3Q14576 367 aaKnown RBP5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 RAB35Q15286 201 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 SGCBQ16585 318 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 TAF9Q16594 264 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 IQCJQ1A5X6 159 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 HNRNPA1L2Q32P51 320 aaKnown RBP5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 LY6G5CQ5SRR4 150 aa5.21□□□□□ -1.58
SNRPA1-209ENST00000560307 FNDC7Q5VTL7 733 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms