RNA–Protein interactions for RNA: ENST00000560173.1

LDLR-211, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-211ENST00000560173 UBE2V2Q15819 145 aa7.8□□□□□ -1.16
LDLR-211ENST00000560173 OR2G6Q5TZ20 316 aa7.8□□□□□ -1.16
LDLR-211ENST00000560173 DCAF12L2Q5VW00 463 aa7.8□□□□□ -1.16
LDLR-211ENST00000560173 HAGHLQ6PII5 290 aaPredicted RBP7.8□□□□□ -1.16
LDLR-211ENST00000560173 ZNF841Q6ZN19 808 aa7.8□□□□□ -1.16
LDLR-211ENST00000560173 UTS2BQ765I0 119 aa7.8□□□□□ -1.16
LDLR-211ENST00000560173 ZNF573Q86YE8 665 aa7.8□□□□□ -1.16
LDLR-211ENST00000560173 CROCCP3Q8IVE0 287 aa7.8□□□□□ -1.16
LDLR-211ENST00000560173 ZNF485Q8NCK3 441 aa7.8□□□□□ -1.16
LDLR-211ENST00000560173 RPS4Y2Q8TD47 263 aa7.8□□□□□ -1.16
LDLR-211ENST00000560173 S100ZQ8WXG8 99 aa7.8□□□□□ -1.16
LDLR-211ENST00000560173 DACT3Q96B18 629 aaPredicted RBP7.8□□□□□ -1.16
LDLR-211ENST00000560173 SEH1LQ96EE3 360 aa7.8□□□□□ -1.16
LDLR-211ENST00000560173 ADAT3Q96EY9 351 aaPredicted RBP7.8□□□□□ -1.16
LDLR-211ENST00000560173 TECTBQ96PL2 329 aa7.8□□□□□ -1.16
LDLR-211ENST00000560173 DCUN1D5Q9BTE7 237 aa7.8□□□□□ -1.16
LDLR-211ENST00000560173 SSBP3Q9BWW4 388 aaPredicted RBP7.8□□□□□ -1.16
LDLR-211ENST00000560173 TMPRSS13Q9BYE2 586 aa7.8□□□□□ -1.16
LDLR-211ENST00000560173 WDR13Q9H1Z4 485 aa7.8□□□□□ -1.16
LDLR-211ENST00000560173 NDUFB11Q9NX14 153 aa7.8□□□□□ -1.16
LDLR-211ENST00000560173 CTSZQ9UBR2 303 aa7.8□□□□□ -1.16
LDLR-211ENST00000560173 OR5V1Q9UGF6 321 aa7.8□□□□□ -1.16
LDLR-211ENST00000560173 STUB1Q9UNE7 303 aa7.8□□□□□ -1.16
LDLR-211ENST00000560173 IGKV1-27A0A075B6S5 117 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 IGKV1-9A0A0C4DH69 117 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 TRBV2A0A0J9YWF9 115 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 TRAPPC2LH3BP13 241 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 J3QLI3 93 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 AKR7A2O43488 359 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 FCN3O75636 299 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 LALBAP00709 142 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 FAM157CP0CG43 387 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 ZNF20P17024 532 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 SRD5A1P18405 259 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 GADD45AP24522 165 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 MPZP25189 248 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 GABRA5P31644 462 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 HAAOP46952 286 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 GMFBP60983 142 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 GNB2P62879 340 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 PAX2Q02962 417 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 CNN3Q15417 329 aaKnown RBP7.79□□□□□ -1.16
LDLR-211ENST00000560173 MICBQ29980 383 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 CCDC58Q4VC31 144 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 WDR25Q64LD2 544 aaPredicted RBP7.79□□□□□ -1.16
LDLR-211ENST00000560173 STUMQ69YW2 141 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 FAHD2BQ6P2I3 314 aaPredicted RBP7.79□□□□□ -1.16
LDLR-211ENST00000560173 RPL22L1Q6P5R6 122 aaKnown RBP7.79□□□□□ -1.16
LDLR-211ENST00000560173 C1orf229Q6ZS94 237 aaPredicted RBP7.79□□□□□ -1.16
LDLR-211ENST00000560173 POC1AQ8NBT0 407 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 OR13C3Q8NGS6 347 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 OR5AK2Q8NH90 309 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 TRMT10AQ8TBZ6 339 aaKnown RBP7.79□□□□□ -1.16
LDLR-211ENST00000560173 NPRL2Q8WTW4 380 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 RGP1Q92546 391 aaPredicted RBP7.79□□□□□ -1.16
LDLR-211ENST00000560173 FGGYQ96C11 551 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 FAHD2AQ96GK7 314 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 OPALINQ96PE5 141 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 OR5M11Q96RB7 305 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 PDCD1LG2Q9BQ51 273 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 NRIP2Q9BQI9 281 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 PKIBQ9C010 78 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 NAA50Q9GZZ1 169 aaKnown RBP7.79□□□□□ -1.16
LDLR-211ENST00000560173 COMMD4Q9H0A8 199 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 DCSTAMPQ9H295 470 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 MMP27Q9H306 513 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 SMURF1Q9HCE7 757 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 HMG20AQ9NP66 347 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 MMP26Q9NRE1 261 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 BABAM2Q9NXR7 383 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 CCDC59Q9P031 241 aaKnown RBP7.79□□□□□ -1.16
LDLR-211ENST00000560173 KAAG1Q9UBP8 84 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 DNAJB11Q9UBS4 358 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 CLN8Q9UBY8 286 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 OPN4Q9UHM6 478 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 SLC7A11Q9UPY5 501 aa7.79□□□□□ -1.16
LDLR-211ENST00000560173 SIRT4Q9Y6E7 314 aaPredicted RBP7.79□□□□□ -1.16
LDLR-211ENST00000560173 IGHV2-70DA0A0C4DH43 119 aa7.78□□□□□ -1.16
LDLR-211ENST00000560173 LOC100506127A0A0U1RQW1 187 aa7.78□□□□□ -1.16
LDLR-211ENST00000560173 A0A1B0GW55 424 aa7.78□□□□□ -1.16
LDLR-211ENST00000560173 FAM230AA0A1W2PPH8 454 aa7.78□□□□□ -1.16
LDLR-211ENST00000560173 C22orf46C9J442 243 aa7.78□□□□□ -1.16
LDLR-211ENST00000560173 OGG1O15527 345 aa7.78□□□□□ -1.16
LDLR-211ENST00000560173 SYNGR1O43759 233 aa7.78□□□□□ -1.16
LDLR-211ENST00000560173 NOS1APO75052 506 aaPredicted RBP7.78□□□□□ -1.16
LDLR-211ENST00000560173 SERPINA3P01011 423 aa7.78□□□□□ -1.16
LDLR-211ENST00000560173 AVPP01185 164 aa7.78□□□□□ -1.16
LDLR-211ENST00000560173 DUX4L2P0CJ85 424 aa7.78□□□□□ -1.16
LDLR-211ENST00000560173 DUX4L3P0CJ86 424 aa7.78□□□□□ -1.16
LDLR-211ENST00000560173 DUX4L4P0CJ87 422 aa7.78□□□□□ -1.16
LDLR-211ENST00000560173 DUX4L5P0CJ88 424 aa7.78□□□□□ -1.16
LDLR-211ENST00000560173 DUX4L6P0CJ89 424 aa7.78□□□□□ -1.16
LDLR-211ENST00000560173 DUX4L7P0CJ90 424 aa7.78□□□□□ -1.16
LDLR-211ENST00000560173 PGA5P0DJD9 388 aa7.78□□□□□ -1.16
LDLR-211ENST00000560173 ZNF182P17025 639 aaPredicted RBP7.78□□□□□ -1.16
LDLR-211ENST00000560173 ATF1P18846 271 aa7.78□□□□□ -1.16
LDLR-211ENST00000560173 AMY2BP19961 511 aa7.78□□□□□ -1.16
LDLR-211ENST00000560173 GLRA1P23415 457 aa7.78□□□□□ -1.16
LDLR-211ENST00000560173 NPY4RP50391 375 aa7.78□□□□□ -1.16
LDLR-211ENST00000560173 FUT6P51993 359 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms