RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 FBXL14Q8N1E6 418 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 FBXW5Q969U6 566 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 MUCL1Q96DR8 90 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 MED30Q96HR3 178 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 CYYR1Q96J86 154 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 PLEKHJ1Q9NW61 149 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 SLC2A8Q9NY64 477 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 JKAMPQ9P055 326 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 FAM90A10PA6NDY2 464 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 FAM90A18PA6NE21 464 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 FAM90A16PA6NEW6 464 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 FAM90A20PA6NIJ5 464 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 FAM90A8PA6NJQ4 464 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 FAM90A7PA6NKC0 464 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 FAM90A22PA8MWA6 464 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 FAM90A12PA8MX19 464 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 FAM90A5PA8MXJ8 464 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 FAM90A23PA8MXZ1 464 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 M0QYG6 137 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 GEMIN2O14893 280 aaKnown RBP10.85□□□□□ -0.67
USP3-213ENST00000559711 ARPC1BO15143 372 aaKnown RBP10.85□□□□□ -0.67
USP3-213ENST00000559711 FAM90A15PP0C7V4 464 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 FAM90A13PP0C7W8 464 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 FAM90A14PP0C7W9 464 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 FAM90A24PP0C7X0 464 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 CHATP28329 748 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 MPV17P39210 176 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 RBM11P57052 281 aaKnown RBP10.85□□□□□ -0.67
USP3-213ENST00000559711 NAAAQ02083 359 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 FAM27E3Q08E93 113 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 ARFRP1Q13795 201 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 ALKBH6Q3KRA9 238 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 PIGYQ3MUY2 71 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 NHLRC3Q5JS37 347 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 C6orf201Q7Z4U5 140 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 HOGA1Q86XE5 327 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 GIMAP1Q8WWP7 306 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 SNAPC3Q92966 411 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 USB1Q9BQ65 265 aaKnown RBP10.85□□□□□ -0.67
USP3-213ENST00000559711 SLC25A21Q9BQT8 299 aaPredicted RBP10.85□□□□□ -0.67
USP3-213ENST00000559711 PKIBQ9C010 78 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 OR51J1Q9H342 316 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 OR51I2Q9H344 312 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 ELOVL5Q9NYP7 299 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 MTCH1Q9NZJ7 389 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 ST3GAL6Q9Y274 331 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 CACNA1AO00555 2505 aa10.85□□□□□ -0.67
USP3-213ENST00000559711 MYO7BQ6PIF6 2116 aa10.84□□□□□ -0.67
USP3-213ENST00000559711 ZZEF1O43149 2961 aa10.84□□□□□ -0.67
USP3-213ENST00000559711 A0A1B0GUH1 482 aa10.84□□□□□ -0.67
USP3-213ENST00000559711 DISC1C4P0D8 188 aa10.84□□□□□ -0.67
USP3-213ENST00000559711 EEF1E1-BLOC1S5C9J1V9 151 aa10.84□□□□□ -0.67
USP3-213ENST00000559711 PYCARD-AS1I3L0S3 204 aa10.84□□□□□ -0.67
USP3-213ENST00000559711 SLC34A2O95436 690 aa10.84□□□□□ -0.67
USP3-213ENST00000559711 AMY2AP04746 511 aa10.84□□□□□ -0.67
USP3-213ENST00000559711 IL5P05113 134 aa10.84□□□□□ -0.67
USP3-213ENST00000559711 KITLGP21583 273 aa10.84□□□□□ -0.67
USP3-213ENST00000559711 PMELP40967 661 aa10.84□□□□□ -0.67
USP3-213ENST00000559711 IL24Q13007 206 aa10.84□□□□□ -0.67
USP3-213ENST00000559711 DAZAP2Q15038 168 aaPredicted RBP10.84□□□□□ -0.67
USP3-213ENST00000559711 ZMYND11Q15326 602 aa10.84□□□□□ -0.67
USP3-213ENST00000559711 RNASE10Q5GAN6 216 aaKnown RBP10.84□□□□□ -0.67
USP3-213ENST00000559711 MBNL2Q5VZF2 373 aaKnown RBP10.84□□□□□ -0.67
USP3-213ENST00000559711 OR52W1Q6IF63 320 aa10.84□□□□□ -0.67
USP3-213ENST00000559711 BPIFB2Q8N4F0 458 aa10.84□□□□□ -0.67
USP3-213ENST00000559711 DRAXINQ8NBI3 349 aaPredicted RBP10.84□□□□□ -0.67
USP3-213ENST00000559711 ZCCHC14Q8WYQ9 949 aaKnown RBP10.84□□□□□ -0.67
USP3-213ENST00000559711 SLAMF9Q96A28 289 aa10.84□□□□□ -0.67
USP3-213ENST00000559711 SLC6A7Q99884 636 aa10.84□□□□□ -0.67
USP3-213ENST00000559711 MICU1Q9BPX6 476 aa10.84□□□□□ -0.67
USP3-213ENST00000559711 VKORC1Q9BQB6 163 aa10.84□□□□□ -0.67
USP3-213ENST00000559711 GINS4Q9BRT9 223 aa10.84□□□□□ -0.67
USP3-213ENST00000559711 RTL8AQ9BWD3 113 aa10.84□□□□□ -0.67
USP3-213ENST00000559711 PRORYQ9H606 182 aa10.84□□□□□ -0.67
USP3-213ENST00000559711 SCP2D1Q9UJQ7 156 aa10.84□□□□□ -0.67
USP3-213ENST00000559711 PURGQ9UJV8 347 aaKnown RBP10.84□□□□□ -0.67
USP3-213ENST00000559711 PLEKHA6Q9Y2H5 1048 aa10.84□□□□□ -0.67
USP3-213ENST00000559711 CHD8Q9HCK8 2581 aa10.84□□□□□ -0.67
USP3-213ENST00000559711 TRAPPC2LH3BP13 241 aa10.83□□□□□ -0.68
USP3-213ENST00000559711 BCL3P20749 454 aa10.83□□□□□ -0.68
USP3-213ENST00000559711 HRH1P35367 487 aa10.83□□□□□ -0.68
USP3-213ENST00000559711 ZNF83P51522 516 aa10.83□□□□□ -0.68
USP3-213ENST00000559711 FGF12P61328 243 aa10.83□□□□□ -0.68
USP3-213ENST00000559711 ST3GAL2Q16842 350 aa10.83□□□□□ -0.68
USP3-213ENST00000559711 ZNF718Q3SXZ3 478 aa10.83□□□□□ -0.68
USP3-213ENST00000559711 ACTBL2Q562R1 376 aa10.83□□□□□ -0.68
USP3-213ENST00000559711 VAX1Q5SQQ9 334 aa10.83□□□□□ -0.68
USP3-213ENST00000559711 ATAD3CQ5T2N8 411 aa10.83□□□□□ -0.68
USP3-213ENST00000559711 METTL11BQ5VVY1 283 aa10.83□□□□□ -0.68
USP3-213ENST00000559711 HAGHLQ6PII5 290 aaPredicted RBP10.83□□□□□ -0.68
USP3-213ENST00000559711 GLDNQ6ZMI3 551 aaPredicted RBP10.83□□□□□ -0.68
USP3-213ENST00000559711 IDO2Q6ZQW0 420 aa10.83□□□□□ -0.68
USP3-213ENST00000559711 LIX1LQ8IVB5 337 aa10.83□□□□□ -0.68
USP3-213ENST00000559711 OR8G5Q8NG78 346 aa10.83□□□□□ -0.68
USP3-213ENST00000559711 OR10AD1Q8NGE0 317 aa10.83□□□□□ -0.68
USP3-213ENST00000559711 OR4K15Q8NH41 348 aa10.83□□□□□ -0.68
USP3-213ENST00000559711 EMG1Q92979 244 aaKnown RBP10.83□□□□□ -0.68
USP3-213ENST00000559711 DMRTA2Q96SC8 542 aa10.83□□□□□ -0.68
USP3-213ENST00000559711 PRRT1Q99946 306 aa10.83□□□□□ -0.68
USP3-213ENST00000559711 ALX4Q9H161 411 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms