RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 hCG_1809904A0A1W2PP81 198 aa12.64□□□□□ -0.39
TPM1-211ENST00000558314 A0A1W2PPE2 198 aa12.64□□□□□ -0.39
TPM1-211ENST00000558314 A0A1W2PR64 198 aa12.64□□□□□ -0.39
TPM1-211ENST00000558314 A0A1W2PRV1 198 aa12.64□□□□□ -0.39
TPM1-211ENST00000558314 PQLC2LA1A4F0 135 aa12.64□□□□□ -0.39
TPM1-211ENST00000558314 G3V2T6 193 aa12.64□□□□□ -0.39
TPM1-211ENST00000558314 IGLV3-1P01715 115 aa12.64□□□□□ -0.39
TPM1-211ENST00000558314 KRT8P05787 483 aa12.64□□□□□ -0.39
TPM1-211ENST00000558314 ATP6V1E1P36543 226 aa12.64□□□□□ -0.39
TPM1-211ENST00000558314 EDDM3BP56851 147 aa12.64□□□□□ -0.39
TPM1-211ENST00000558314 ZNF273Q14593 569 aa12.64□□□□□ -0.39
TPM1-211ENST00000558314 SLX4IPQ5VYV7 408 aa12.64□□□□□ -0.39
TPM1-211ENST00000558314 OR14K1Q8NGZ2 314 aa12.64□□□□□ -0.39
TPM1-211ENST00000558314 OR2T6Q8NHC8 308 aa12.64□□□□□ -0.39
TPM1-211ENST00000558314 SLC7A6OSQ96CW6 309 aaPredicted RBP12.64□□□□□ -0.39
TPM1-211ENST00000558314 ADI1Q9BV57 179 aa12.64□□□□□ -0.39
TPM1-211ENST00000558314 SLC7A11Q9UPY5 501 aa12.64□□□□□ -0.39
TPM1-211ENST00000558314 V9GYS6 101 aa12.64□□□□□ -0.39
TPM1-211ENST00000558314 NOTCH1P46531 2555 aa12.63□□□□□ -0.39
TPM1-211ENST00000558314 A0A1B0GTI1 187 aa12.63□□□□□ -0.39
TPM1-211ENST00000558314 DLGAP1O14490 977 aa12.63□□□□□ -0.39
TPM1-211ENST00000558314 TK1P04183 234 aa12.63□□□□□ -0.39
TPM1-211ENST00000558314 RAB13P51153 203 aa12.63□□□□□ -0.39
TPM1-211ENST00000558314 COL10A1Q03692 680 aa12.63□□□□□ -0.39
TPM1-211ENST00000558314 DYNC1I2Q13409 638 aaKnown RBP12.63□□□□□ -0.39
TPM1-211ENST00000558314 EDDM3AQ14507 147 aa12.63□□□□□ -0.39
TPM1-211ENST00000558314 HERPUD1Q15011 391 aa12.63□□□□□ -0.39
TPM1-211ENST00000558314 FAM189A2Q15884 450 aa12.63□□□□□ -0.39
TPM1-211ENST00000558314 AADACL4Q5VUY2 407 aa12.63□□□□□ -0.39
TPM1-211ENST00000558314 NXNL2Q5VZ03 156 aa12.63□□□□□ -0.39
TPM1-211ENST00000558314 SSX6Q7RTT6 188 aa12.63□□□□□ -0.39
TPM1-211ENST00000558314 LHFPL4Q7Z7J7 247 aa12.63□□□□□ -0.39
TPM1-211ENST00000558314 AMIGO2Q86SJ2 522 aa12.63□□□□□ -0.39
TPM1-211ENST00000558314 CALHM1Q8IU99 346 aa12.63□□□□□ -0.39
TPM1-211ENST00000558314 LYG1Q8N1E2 194 aa12.63□□□□□ -0.39
TPM1-211ENST00000558314 KLHDC1Q8N7A1 406 aa12.63□□□□□ -0.39
TPM1-211ENST00000558314 OR10H4Q8NGA5 316 aa12.63□□□□□ -0.39
TPM1-211ENST00000558314 UTP4Q969X6 686 aaKnown RBP12.63□□□□□ -0.39
TPM1-211ENST00000558314 SLAMF9Q96A28 289 aa12.63□□□□□ -0.39
TPM1-211ENST00000558314 NRIP2Q9BQI9 281 aa12.63□□□□□ -0.39
TPM1-211ENST00000558314 CADM1Q9BY67 442 aaKnown RBP12.63□□□□□ -0.39
TPM1-211ENST00000558314 RIBC2Q9H4K1 309 aa12.63□□□□□ -0.39
TPM1-211ENST00000558314 ZAR1LA6NP61 321 aa12.62□□□□□ -0.39
TPM1-211ENST00000558314 SYT7O43581 403 aa12.62□□□□□ -0.39
TPM1-211ENST00000558314 SRSF10O75494 262 aaKnown RBP12.62□□□□□ -0.39
TPM1-211ENST00000558314 ARG1P05089 322 aa12.62□□□□□ -0.39
TPM1-211ENST00000558314 SNU13P55769 128 aaKnown RBP12.62□□□□□ -0.39
TPM1-211ENST00000558314 OCLNQ16625 522 aa12.62□□□□□ -0.39
TPM1-211ENST00000558314 ARSJQ5FYB0 599 aaPredicted RBP12.62□□□□□ -0.39
TPM1-211ENST00000558314 KRT74Q7RTS7 529 aa12.62□□□□□ -0.39
TPM1-211ENST00000558314 ZDHHC13Q8IUH4 622 aa12.62□□□□□ -0.39
TPM1-211ENST00000558314 GID4Q8IVV7 300 aa12.62□□□□□ -0.39
TPM1-211ENST00000558314 AJUBAQ96IF1 538 aa12.62□□□□□ -0.39
TPM1-211ENST00000558314 MNTQ99583 582 aa12.62□□□□□ -0.39
TPM1-211ENST00000558314 RAB18Q9NP72 206 aa12.62□□□□□ -0.39
TPM1-211ENST00000558314 ABCB10Q9NRK6 738 aa12.62□□□□□ -0.39
TPM1-211ENST00000558314 FBLN5Q9UBX5 448 aa12.62□□□□□ -0.39
TPM1-211ENST00000558314 VWFP04275 2813 aa12.61□□□□□ -0.39
TPM1-211ENST00000558314 TET2Q6N021 2002 aaPredicted RBP12.61□□□□□ -0.39
TPM1-211ENST00000558314 A0A1W2PQL4 384 aaPredicted RBP12.61□□□□□ -0.39
TPM1-211ENST00000558314 CHST1O43916 411 aa12.61□□□□□ -0.39
TPM1-211ENST00000558314 CALCBP10092 127 aa12.61□□□□□ -0.39
TPM1-211ENST00000558314 FASP25445 335 aa12.61□□□□□ -0.39
TPM1-211ENST00000558314 ATP6AP1Q15904 470 aa12.61□□□□□ -0.39
TPM1-211ENST00000558314 TMEM42Q69YG0 159 aa12.61□□□□□ -0.39
TPM1-211ENST00000558314 C12orf73Q69YU5 71 aa12.61□□□□□ -0.39
TPM1-211ENST00000558314 GDPD3Q7L5L3 318 aa12.61□□□□□ -0.39
TPM1-211ENST00000558314 TMEM219Q86XT9 240 aa12.61□□□□□ -0.39
TPM1-211ENST00000558314 ITFG2Q969R8 447 aa12.61□□□□□ -0.39
TPM1-211ENST00000558314 NPFFR1Q9GZQ6 430 aa12.61□□□□□ -0.39
TPM1-211ENST00000558314 MEGF9Q9H1U4 602 aa12.61□□□□□ -0.39
TPM1-211ENST00000558314 TGP01266 2768 aa12.6□□□□□ -0.39
TPM1-211ENST00000558314 METTL15A6NJ78 407 aa12.6□□□□□ -0.39
TPM1-211ENST00000558314 F8VVB4 439 aa12.6□□□□□ -0.39
TPM1-211ENST00000558314 F8VWA3 439 aa12.6□□□□□ -0.39
TPM1-211ENST00000558314 NOS1APO75052 506 aaPredicted RBP12.6□□□□□ -0.39
TPM1-211ENST00000558314 POU3F4P49335 361 aa12.6□□□□□ -0.39
TPM1-211ENST00000558314 EFNB2P52799 333 aa12.6□□□□□ -0.39
TPM1-211ENST00000558314 HABP2Q14520 560 aaPredicted RBP12.6□□□□□ -0.39
TPM1-211ENST00000558314 SSX2Q16385 188 aa12.6□□□□□ -0.39
TPM1-211ENST00000558314 NSUN5P1Q3KNT7 163 aa12.6□□□□□ -0.39
TPM1-211ENST00000558314 C1orf146Q5VVC0 180 aa12.6□□□□□ -0.39
TPM1-211ENST00000558314 SLC25A26Q70HW3 274 aa12.6□□□□□ -0.39
TPM1-211ENST00000558314 EGFL6Q8IUX8 553 aa12.6□□□□□ -0.39
TPM1-211ENST00000558314 C11orf42Q8N5U0 333 aa12.6□□□□□ -0.39
TPM1-211ENST00000558314 TPRX1Q8N7U7 411 aa12.6□□□□□ -0.39
TPM1-211ENST00000558314 OR13D1Q8NGV5 346 aa12.6□□□□□ -0.39
TPM1-211ENST00000558314 EMG1Q92979 244 aaKnown RBP12.6□□□□□ -0.39
TPM1-211ENST00000558314 BORCS8Q96FH0 119 aa12.6□□□□□ -0.39
TPM1-211ENST00000558314 CEP19Q96LK0 163 aa12.6□□□□□ -0.39
TPM1-211ENST00000558314 OR5M11Q96RB7 305 aa12.6□□□□□ -0.39
TPM1-211ENST00000558314 CIB1Q99828 191 aa12.6□□□□□ -0.39
TPM1-211ENST00000558314 WARS2Q9UGM6 360 aaKnown RBP12.6□□□□□ -0.39
TPM1-211ENST00000558314 GNG8Q9UK08 70 aa12.6□□□□□ -0.39
TPM1-211ENST00000558314 AP4S1Q9Y587 144 aa12.6□□□□□ -0.39
TPM1-211ENST00000558314 CMYA5Q8N3K9 4069 aa12.6□□□□□ -0.39
TPM1-211ENST00000558314 K7N7A8 449 aa12.59□□□□□ -0.39
TPM1-211ENST00000558314 PEX14O75381 377 aa12.59□□□□□ -0.39
TPM1-211ENST00000558314 GATBO75879 557 aaKnown RBP12.59□□□□□ -0.39
TPM1-211ENST00000558314 SERPINA3P01011 423 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms