RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 KCNIP3Q9Y2W7 256 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 PRELID3BQ9Y3B1 194 aa7.24□□□□□ -1.25
SPG11-209ENST00000558253 RALGAPA1Q6GYQ0 2036 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 CABIN1Q9Y6J0 2220 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 TEX13DA0A0J9YY54 714 aaPredicted RBP7.23□□□□□ -1.25
SPG11-209ENST00000558253 hCG_38984A0A1B0GV85 526 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 C9orf172C9J069 976 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 ZNF587BE7ETH6 402 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 F8VVB4 439 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 F8VWA3 439 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 J3QW42 95 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 ABCD4O14678 606 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 TSPAN4O14817 238 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 RAD51DO75771 328 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 NEURL1O76050 574 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 MT-CO3P00414 261 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 CST4P01036 141 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 IFNA2P01563 188 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 RLN2P04090 185 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 GLAP06280 429 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 MMP7P09237 267 aaPredicted RBP7.23□□□□□ -1.25
SPG11-209ENST00000558253 SERPINA2P20848 420 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 RBMXP38159 391 aaKnown RBP7.23□□□□□ -1.25
SPG11-209ENST00000558253 HOXA1P49639 335 aaPredicted RBP7.23□□□□□ -1.25
SPG11-209ENST00000558253 UCP3P55916 312 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 PDZK1IP1Q13113 114 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 CEACAM16Q2WEN9 425 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 SNAI3Q3KNW1 292 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 PAN3Q58A45 887 aaKnown RBP7.23□□□□□ -1.25
SPG11-209ENST00000558253 DCAF10Q5QP82 559 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 AADACL3Q5VUY0 350 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 ELP2Q6IA86 826 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 ZNF774Q6NX45 483 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 RPUSD3Q6P087 351 aaKnown RBP7.23□□□□□ -1.25
SPG11-209ENST00000558253 PRSS54Q6PEW0 395 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 CRIP3Q6Q6R5 217 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 CLEC18BQ6UXF7 455 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 TFAP2EQ6VUC0 442 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 Q6ZS49 121 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 MOB3CQ70IA8 216 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 KCTD9Q7L273 389 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 LINC00596Q86U02 117 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 TMEM200AQ86VY9 491 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 SGPP2Q8IWX5 399 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 FAM185AQ8N0U4 392 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 OSR2Q8N2R0 312 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 TMEM105Q8N8V8 129 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 OR13G1Q8NGZ3 307 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 GTF3AQ92664 365 aaKnown RBP7.23□□□□□ -1.25
SPG11-209ENST00000558253 NKX3-1Q99801 234 aaPredicted RBP7.23□□□□□ -1.25
SPG11-209ENST00000558253 SYT3Q9BQG1 590 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 RTBDNQ9BSG5 229 aaPredicted RBP7.23□□□□□ -1.25
SPG11-209ENST00000558253 SOX7Q9BT81 388 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 REG4Q9BYZ8 158 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 WNT5BQ9H1J7 359 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 ARRDC1-AS1Q9H2J1 176 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 RIMS4Q9H426 269 aaPredicted RBP7.23□□□□□ -1.25
SPG11-209ENST00000558253 PLK3Q9H4B4 646 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 ZNF703Q9H7S9 590 aaPredicted RBP7.23□□□□□ -1.25
SPG11-209ENST00000558253 ACKR4Q9NPB9 350 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 PRDM6Q9NQX0 595 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 FAM86C1Q9NVL1 165 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 ANXA10Q9UJ72 324 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 KCNMB2Q9Y691 235 aa7.23□□□□□ -1.25
SPG11-209ENST00000558253 RAB19A4D1S5 217 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 E9PLN8 166 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 F5H0A9 414 aaPredicted RBP7.22□□□□□ -1.25
SPG11-209ENST00000558253 HTR3BO95264 441 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 FGF2P09038 288 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 DBHP09172 617 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 RFPL3SP0C7P2 107 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 TPT1P13693 172 aaKnown RBP7.22□□□□□ -1.25
SPG11-209ENST00000558253 CD59P13987 128 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 PGAM2P15259 253 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 ZNF708P17019 499 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 FUT3P21217 361 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 CHATP28329 748 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 AVPR2P30518 371 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 SERPINF1P36955 418 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 NPY4RP50391 375 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 LHX2P50458 406 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 SOX8P57073 446 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 SRPXP78539 464 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 FAM3AP98173 230 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 PLP2Q04941 152 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 SNTB1Q13884 538 aaKnown RBP7.22□□□□□ -1.25
SPG11-209ENST00000558253 ZNF273Q14593 569 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 OR1C1Q15619 314 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 SFRP5Q5T4F7 317 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 ALKAL2Q6UX46 152 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 C1QL2Q7Z5L3 287 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 SKA3Q8IX90 412 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 MKXQ8IYA7 352 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 ADAD2Q8NCV1 583 aaKnown RBP7.22□□□□□ -1.25
SPG11-209ENST00000558253 SLC30A7Q8NEW0 376 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 OR5L1Q8NGL2 311 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 ADAMTS17Q8TE56 1095 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 CASTOR1Q8WTX7 329 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 ROBO4Q8WZ75 1007 aa7.22□□□□□ -1.25
SPG11-209ENST00000558253 APOBEC3DQ96AK3 386 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms