RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 OR8B2Q96RD0 313 aa21.32■■□□□ 1
SMAD6-202ENST00000557916 TMEM138Q9NPI0 162 aa21.32■■□□□ 1
SMAD6-202ENST00000557916 YAE1D1Q9NRH1 226 aa21.32■■□□□ 1
SMAD6-202ENST00000557916 TRAV8-7A0A075B6U6 113 aa21.31■■□□□ 1
SMAD6-202ENST00000557916 PIN1P1O15428 100 aa21.31■■□□□ 1
SMAD6-202ENST00000557916 ADAM20O43506 726 aa21.31■■□□□ 1
SMAD6-202ENST00000557916 SPRY1O43609 319 aaPredicted RBP21.31■■□□□ 1
SMAD6-202ENST00000557916 NXPH2O95156 264 aa21.31■■□□□ 1
SMAD6-202ENST00000557916 MSMBP08118 114 aa21.31■■□□□ 1
SMAD6-202ENST00000557916 BDKRB2P30411 391 aa21.31■■□□□ 1
SMAD6-202ENST00000557916 ERVK11-1P61568 191 aa21.31■■□□□ 1
SMAD6-202ENST00000557916 TRAM1Q15629 374 aa21.31■■□□□ 1
SMAD6-202ENST00000557916 ESCO2Q56NI9 601 aa21.31■■□□□ 1
SMAD6-202ENST00000557916 STUMQ69YW2 141 aa21.31■■□□□ 1
SMAD6-202ENST00000557916 FAM166AQ6J272 317 aa21.31■■□□□ 1
SMAD6-202ENST00000557916 CRIP3Q6Q6R5 217 aa21.31■■□□□ 1
SMAD6-202ENST00000557916 ACP7Q6ZNF0 438 aa21.31■■□□□ 1
SMAD6-202ENST00000557916 SATL1Q86VE3 508 aa21.31■■□□□ 1
SMAD6-202ENST00000557916 OR5D18Q8NGL1 313 aa21.31■■□□□ 1
SMAD6-202ENST00000557916 CPNE2Q96FN4 548 aaPredicted RBP21.31■■□□□ 1
SMAD6-202ENST00000557916 CEP19Q96LK0 163 aa21.31■■□□□ 1
SMAD6-202ENST00000557916 CCL13Q99616 98 aa21.31■■□□□ 1
SMAD6-202ENST00000557916 MTORP42345 2549 aa21.31■■□□□ 1
SMAD6-202ENST00000557916 OR2AT4A6NND4 320 aa21.3■■□□□ 1
SMAD6-202ENST00000557916 ALDOBP05062 364 aa21.3■■□□□ 1
SMAD6-202ENST00000557916 PSMA1P25786 263 aaKnown RBP21.3■■□□□ 1
SMAD6-202ENST00000557916 PITPNBP48739 271 aa21.3■■□□□ 1
SMAD6-202ENST00000557916 SMIM21Q3B7S5 101 aa21.3■■□□□ 1
SMAD6-202ENST00000557916 CEACAM19Q7Z692 300 aa21.3■■□□□ 1
SMAD6-202ENST00000557916 GPER1Q99527 375 aa21.3■■□□□ 1
SMAD6-202ENST00000557916 FOXJ3Q9UPW0 622 aa21.3■■□□□ 1
SMAD6-202ENST00000557916 TMPRSS2O15393 492 aa21.29■■□□□ 1
SMAD6-202ENST00000557916 FOXH1O75593 365 aa21.29■■□□□ 1
SMAD6-202ENST00000557916 SC5DO75845 299 aa21.29■■□□□ 1
SMAD6-202ENST00000557916 ZFP36P26651 326 aaKnown RBP21.29■■□□□ 1
SMAD6-202ENST00000557916 PSMB9P28065 219 aa21.29■■□□□ 1
SMAD6-202ENST00000557916 LCN2P80188 198 aa21.29■■□□□ 1
SMAD6-202ENST00000557916 SSX1Q16384 188 aa21.29■■□□□ 1
SMAD6-202ENST00000557916 ATPAF1Q5TC12 328 aaPredicted RBP21.29■■□□□ 1
SMAD6-202ENST00000557916 DDI2Q5TDH0 399 aa21.29■■□□□ 1
SMAD6-202ENST00000557916 SSBP3Q9BWW4 388 aaPredicted RBP21.29■■□□□ 1
SMAD6-202ENST00000557916 HES4Q9HCC6 221 aa21.29■■□□□ 1
SMAD6-202ENST00000557916 KAAG1Q9UBP8 84 aa21.29■■□□□ 1
SMAD6-202ENST00000557916 CTSZQ9UBR2 303 aa21.29■■□□□ 1
SMAD6-202ENST00000557916 SF3B6Q9Y3B4 125 aaKnown RBP21.29■■□□□ 1
SMAD6-202ENST00000557916 F8VVB4 439 aa21.29■■□□□ 1
SMAD6-202ENST00000557916 F8VWA3 439 aa21.29■■□□□ 1
SMAD6-202ENST00000557916 TRAPPC2LH3BP13 241 aa21.29■■□□□ 1
SMAD6-202ENST00000557916 ANGPTL7O43827 346 aa21.29■■□□□ 1
SMAD6-202ENST00000557916 PSG2P11465 335 aa21.29■■□□□ 1
SMAD6-202ENST00000557916 GABRA5P31644 462 aa21.29■■□□□ 1
SMAD6-202ENST00000557916 GNB2P62879 340 aa21.29■■□□□ 1
SMAD6-202ENST00000557916 FAM27D1Q5T7N8 215 aa21.29■■□□□ 1
SMAD6-202ENST00000557916 SLC36A1Q7Z2H8 476 aa21.29■■□□□ 1
SMAD6-202ENST00000557916 GLCCI1Q86VQ1 547 aa21.29■■□□□ 1
SMAD6-202ENST00000557916 TSPAN14Q8NG11 270 aa21.29■■□□□ 1
SMAD6-202ENST00000557916 ANGPTL6Q8NI99 470 aa21.29■■□□□ 1
SMAD6-202ENST00000557916 TMEM186Q96B77 213 aa21.29■■□□□ 1
SMAD6-202ENST00000557916 DNTTIP1Q9H147 329 aa21.29■■□□□ 1
SMAD6-202ENST00000557916 CLN8Q9UBY8 286 aa21.29■■□□□ 1
SMAD6-202ENST00000557916 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP21.28■■□□□ 19e-6■□□□□ 9.3
SMAD6-202ENST00000557916 A8MV72 311 aaPredicted RBP21.28■■□□□ 1
SMAD6-202ENST00000557916 PHF1O43189 567 aaPredicted RBP21.28■■□□□ 1
SMAD6-202ENST00000557916 MAS1P04201 325 aa21.28■■□□□ 1
SMAD6-202ENST00000557916 TMEM225BP0DP42 221 aa21.28■■□□□ 1
SMAD6-202ENST00000557916 AMY2BP19961 511 aa21.28■■□□□ 1
SMAD6-202ENST00000557916 ZNF93P35789 620 aaPredicted RBP21.28■■□□□ 1
SMAD6-202ENST00000557916 DVL1P1P54792 670 aaPredicted RBP21.28■■□□□ 1
SMAD6-202ENST00000557916 ZP1P60852 638 aa21.28■■□□□ 1
SMAD6-202ENST00000557916 ZNF841Q6ZN19 808 aa21.28■■□□□ 1
SMAD6-202ENST00000557916 TMEM91Q6ZNR0 172 aa21.28■■□□□ 1
SMAD6-202ENST00000557916 Q8IYB0 196 aa21.28■■□□□ 1
SMAD6-202ENST00000557916 SAXO1Q8IYX7 474 aa21.28■■□□□ 1
SMAD6-202ENST00000557916 NDUFB11Q9NX14 153 aa21.28■■□□□ 1
SMAD6-202ENST00000557916 KCNS2Q9ULS6 477 aa21.28■■□□□ 1
SMAD6-202ENST00000557916 IGKV1D-17A0A075B6S4 117 aa21.27■■□□□ 1
SMAD6-202ENST00000557916 A0A087WXM4 84 aa21.27■■□□□ 1
SMAD6-202ENST00000557916 TRAV20A0A0B4J274 112 aa21.27■■□□□ 1
SMAD6-202ENST00000557916 IGKV1-12A0A0C4DH73 117 aa21.27■■□□□ 1
SMAD6-202ENST00000557916 MAGEA13PA6NCF6 341 aa21.27■■□□□ 1
SMAD6-202ENST00000557916 NKX6-3A6NJ46 265 aa21.27■■□□□ 1
SMAD6-202ENST00000557916 A8MXK9 166 aa21.27■■□□□ 1
SMAD6-202ENST00000557916 CCRL2O00421 344 aa21.27■■□□□ 1
SMAD6-202ENST00000557916 GABRPO00591 440 aa21.27■■□□□ 1
SMAD6-202ENST00000557916 RGS9O75916 674 aaPredicted RBP21.27■■□□□ 1
SMAD6-202ENST00000557916 IGKV1D-12P01611 117 aa21.27■■□□□ 1
SMAD6-202ENST00000557916 TFF1P04155 84 aa21.27■■□□□ 1
SMAD6-202ENST00000557916 BCL3P20749 454 aa21.27■■□□□ 1
SMAD6-202ENST00000557916 GABRA2P47869 451 aa21.27■■□□□ 1
SMAD6-202ENST00000557916 NPBWR2P48146 333 aa21.27■■□□□ 1
SMAD6-202ENST00000557916 HSD17B12Q53GQ0 312 aa21.27■■□□□ 1
SMAD6-202ENST00000557916 WDR25Q64LD2 544 aaPredicted RBP21.27■■□□□ 1
SMAD6-202ENST00000557916 ZNF788Q6ZQV5 615 aa21.27■■□□□ 1
SMAD6-202ENST00000557916 ZSCAN4Q8NAM6 433 aaPredicted RBP21.27■■□□□ 1
SMAD6-202ENST00000557916 TNFAIP8L1Q8WVP5 186 aa21.27■■□□□ 1
SMAD6-202ENST00000557916 NKX3-1Q99801 234 aaPredicted RBP21.27■■□□□ 1
SMAD6-202ENST00000557916 ZNF696Q9H7X3 374 aa21.27■■□□□ 1
SMAD6-202ENST00000557916 SMURF1Q9HCE7 757 aa21.27■■□□□ 1
SMAD6-202ENST00000557916 HIF1ANQ9NWT6 349 aa21.27■■□□□ 1
SMAD6-202ENST00000557916 A0A1B0GW55 424 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms