RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 XRCC2O43543 280 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 OR5AC1P0C628 307 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 CD27P26842 260 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 CHATP28329 748 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 HNRNPKP61978 463 aaKnown RBP eCLIP10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 CFHR1Q03591 330 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 CLINT1Q14677 625 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 CCDC54Q8NEL0 328 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 PIGQQ9BRB3 760 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 TGIF2Q9GZN2 237 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 FGF21Q9NSA1 209 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 ASXL3Q9C0F0 2248 aa10.33□□□□□ -0.76
VIPAS39-211ENST00000557658 IGLV3-32A0A0A0MS00 114 aa10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 A0A1B0GW64 132 aa10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 C1QL1O75973 258 aa10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 HEXBP07686 556 aa10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 MSR1P21757 451 aa10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 LMO1P25800 156 aa10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 DUSP1P28562 367 aa10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 PLXDC2Q6UX71 529 aa10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 FBXW12Q6X9E4 464 aa10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 LYZL2Q7Z4W2 148 aa10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 C1QL4Q86Z23 238 aa10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 LRTM2Q8N967 370 aa10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 HSD17B11Q8NBQ5 300 aa10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 OR5L2Q8NGL0 311 aa10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 ZNF501Q96CX3 271 aaPredicted RBP10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 C10orf35Q96D05 121 aa10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 MESP1Q9BRJ9 268 aa10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 LIME1Q9H400 295 aa10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 NSG1A0A0A6YYJ2 146 aa10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 AQP7P3A6NL99 342 aa10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 METTL12A8MUP2 240 aa10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 ST8SIA3O43173 380 aa10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 RAMP1O60894 148 aa10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 OR13C7P0DN81 318 aa10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 DTYMKP23919 212 aa10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 MAS1LP35410 378 aa10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 CLDN17P56750 224 aa10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 ZNF239Q16600 458 aaKnown RBP10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 LIAT1Q6ZQX7 453 aa10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 SLC22A8Q8TCC7 542 aa10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 HPSE2Q8WWQ2 592 aa10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 FAAP24Q9BTP7 215 aa10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 TPSD1Q9BZJ3 242 aa10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 METTL9Q9H1A3 318 aa10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 SH3BGRL3Q9H299 93 aa10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 SMDT1Q9H4I9 107 aa10.32□□□□□ -0.76
VIPAS39-211ENST00000557658 IGHV1OR15-9A0A0B4J2B8 117 aa10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 OR2C1O95371 312 aa10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 SFTPDP35247 375 aa10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 PTGDSP41222 190 aa10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 TMEM176BQ3YBM2 270 aaPredicted RBP10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 SOHLH1Q5JUK2 328 aa10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 FAM69BQ5VUD6 431 aa10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 TMEM182Q6ZP80 229 aaPredicted RBP10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 Q6ZSR3 168 aa10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 PPP1R3BQ86XI6 285 aa10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 LGI3Q8N145 548 aa10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 SUMF2Q8NBJ7 301 aa10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 FAM213BQ8TBF2 198 aa10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 C18orf12Q96KH6 178 aa10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 AK3Q9UIJ7 227 aa10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 TINAGQ9UJW2 476 aa10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 NXT1Q9UKK6 140 aaKnown RBP10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 HSF4Q9ULV5 492 aa10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 HDGFL3Q9Y3E1 203 aa10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 RTTNQ86VV8 2226 aa10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 LOC102725191A0A1B0GVB3 256 aa10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 OR5H15A6NDH6 313 aa10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 MSTNO14793 375 aa10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 IGHV2-70P01814 119 aa10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 OPRM1P35372 400 aa10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 CSNK1A1P48729 337 aa10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 RRADP55042 308 aa10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 MTCP1P56278 107 aa10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 FXYD4P59646 89 aa10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 RSU1Q15404 277 aa10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 OR2M3Q8NG83 312 aa10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 OR10G3Q8NGC4 313 aa10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 NTNG2Q96CW9 530 aa10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 SYT3Q9BQG1 590 aa10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 NELFAQ9H3P2 528 aa10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 SEMA5BQ9P283 1151 aa10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 ZDHHC8Q9ULC8 765 aa10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 RCL1Q9Y2P8 373 aaKnown RBP10.31□□□□□ -0.76
VIPAS39-211ENST00000557658 K7N7A8 449 aa10.3□□□□□ -0.76
VIPAS39-211ENST00000557658 PPP1CCP36873 323 aaKnown RBP10.3□□□□□ -0.76
VIPAS39-211ENST00000557658 RAB2AP61019 212 aa10.3□□□□□ -0.76
VIPAS39-211ENST00000557658 RPS23P62266 143 aaKnown RBP10.3□□□□□ -0.76
VIPAS39-211ENST00000557658 NHLH2Q02577 135 aa10.3□□□□□ -0.76
VIPAS39-211ENST00000557658 CHAF1BQ13112 559 aa10.3□□□□□ -0.76
VIPAS39-211ENST00000557658 GNMTQ14749 295 aa10.3□□□□□ -0.76
VIPAS39-211ENST00000557658 TAF9Q16594 264 aa10.3□□□□□ -0.76
VIPAS39-211ENST00000557658 PHLDA2Q53GA4 152 aa10.3□□□□□ -0.76
VIPAS39-211ENST00000557658 ACER2Q5QJU3 275 aa10.3□□□□□ -0.76
VIPAS39-211ENST00000557658 KMT5CQ86Y97 462 aa10.3□□□□□ -0.76
VIPAS39-211ENST00000557658 LRRC18Q8N456 261 aa10.3□□□□□ -0.76
VIPAS39-211ENST00000557658 TSTD1Q8NFU3 115 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms