RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 LOC100130705A0A1B0GUX0 176 aa13.58□□□□□ -0.24
VSX1-207ENST00000557285 E9PQ18 207 aa13.58□□□□□ -0.24
VSX1-207ENST00000557285 H0YAE9 185 aa13.58□□□□□ -0.24
VSX1-207ENST00000557285 J3QRE1 110 aa13.58□□□□□ -0.24
VSX1-207ENST00000557285 IGHV4-59P01825 116 aa13.58□□□□□ -0.24
VSX1-207ENST00000557285 CRYBA1P05813 215 aa13.58□□□□□ -0.24
VSX1-207ENST00000557285 PIPP12273 146 aaPredicted RBP13.58□□□□□ -0.24
VSX1-207ENST00000557285 EEF1B2P24534 225 aaKnown RBP13.58□□□□□ -0.24
VSX1-207ENST00000557285 BLMHQ13867 455 aa13.58□□□□□ -0.24
VSX1-207ENST00000557285 LRRC36Q1X8D7 754 aa13.58□□□□□ -0.24
VSX1-207ENST00000557285 SLC25A26Q70HW3 274 aa13.58□□□□□ -0.24
VSX1-207ENST00000557285 FGGYQ96C11 551 aa13.58□□□□□ -0.24
VSX1-207ENST00000557285 ADAT3Q96EY9 351 aaPredicted RBP13.58□□□□□ -0.24
VSX1-207ENST00000557285 BORCS8Q96FH0 119 aa13.58□□□□□ -0.24
VSX1-207ENST00000557285 ALG8Q9BVK2 526 aa13.58□□□□□ -0.24
VSX1-207ENST00000557285 CHST5Q9GZS9 411 aa13.58□□□□□ -0.24
VSX1-207ENST00000557285 UNKLQ9H9P5 680 aaKnown RBP13.58□□□□□ -0.24
VSX1-207ENST00000557285 MEX3AA1L020 520 aaKnown RBP13.57□□□□□ -0.24
VSX1-207ENST00000557285 F8VVB4 439 aa13.57□□□□□ -0.24
VSX1-207ENST00000557285 F8VWA3 439 aa13.57□□□□□ -0.24
VSX1-207ENST00000557285 NPFFO15130 113 aa13.57□□□□□ -0.24
VSX1-207ENST00000557285 ANGPTL7O43827 346 aa13.57□□□□□ -0.24
VSX1-207ENST00000557285 OCM2P0CE71 109 aa13.57□□□□□ -0.24
VSX1-207ENST00000557285 OCMP0CE72 109 aaPredicted RBP13.57□□□□□ -0.24
VSX1-207ENST00000557285 CALCBP10092 127 aa13.57□□□□□ -0.24
VSX1-207ENST00000557285 GABRB1P18505 474 aa13.57□□□□□ -0.24
VSX1-207ENST00000557285 MDKP21741 143 aaPredicted RBP13.57□□□□□ -0.24
VSX1-207ENST00000557285 MPZP25189 248 aa13.57□□□□□ -0.24
VSX1-207ENST00000557285 POU3F4P49335 361 aa13.57□□□□□ -0.24
VSX1-207ENST00000557285 FUT6P51993 359 aa13.57□□□□□ -0.24
VSX1-207ENST00000557285 ACTA2P62736 377 aa13.57□□□□□ -0.24
VSX1-207ENST00000557285 RPL31P62899 125 aaKnown RBP13.57□□□□□ -0.24
VSX1-207ENST00000557285 ACTG2P63267 376 aa13.57□□□□□ -0.24
VSX1-207ENST00000557285 GUCA2AQ02747 115 aa13.57□□□□□ -0.24
VSX1-207ENST00000557285 IL24Q13007 206 aa13.57□□□□□ -0.24
VSX1-207ENST00000557285 TMEM244Q5VVB8 128 aa13.57□□□□□ -0.24
VSX1-207ENST00000557285 ZNF561Q8N587 486 aa13.57□□□□□ -0.24
VSX1-207ENST00000557285 ASCC1Q8N9N2 400 aaKnown RBP13.57□□□□□ -0.24
VSX1-207ENST00000557285 OR13C3Q8NGS6 347 aa13.57□□□□□ -0.24
VSX1-207ENST00000557285 OR10AC1Q8NH08 325 aa13.57□□□□□ -0.24
VSX1-207ENST00000557285 SSMEM1Q8WWF3 244 aa13.57□□□□□ -0.24
VSX1-207ENST00000557285 RFT1Q96AA3 541 aa13.57□□□□□ -0.24
VSX1-207ENST00000557285 PELI1Q96FA3 418 aa13.57□□□□□ -0.24
VSX1-207ENST00000557285 CEP19Q96LK0 163 aa13.57□□□□□ -0.24
VSX1-207ENST00000557285 PKIBQ9C010 78 aa13.57□□□□□ -0.24
VSX1-207ENST00000557285 PRDM13Q9H4Q3 707 aa13.57□□□□□ -0.24
VSX1-207ENST00000557285 ISG20L2Q9H9L3 353 aaKnown RBP13.57□□□□□ -0.24
VSX1-207ENST00000557285 FAM118AQ9NWS6 357 aa13.57□□□□□ -0.24
VSX1-207ENST00000557285 EXOGQ9Y2C4 368 aaKnown RBP13.57□□□□□ -0.24
VSX1-207ENST00000557285 MYRFQ9Y2G1 1151 aa13.57□□□□□ -0.24
VSX1-207ENST00000557285 MEIOCA2RUB1 952 aa13.56□□□□□ -0.24
VSX1-207ENST00000557285 M0R1W7 72 aa13.56□□□□□ -0.24
VSX1-207ENST00000557285 NOS1APO75052 506 aaPredicted RBP13.56□□□□□ -0.24
VSX1-207ENST00000557285 SNU13P55769 128 aaKnown RBP13.56□□□□□ -0.24
VSX1-207ENST00000557285 COL10A1Q03692 680 aa13.56□□□□□ -0.24
VSX1-207ENST00000557285 CNN3Q15417 329 aaKnown RBP13.56□□□□□ -0.24
VSX1-207ENST00000557285 KCTD20Q7Z5Y7 419 aa13.56□□□□□ -0.24
VSX1-207ENST00000557285 ZNF676Q8N7Q3 588 aa13.56□□□□□ -0.24
VSX1-207ENST00000557285 CCDC54Q8NEL0 328 aa13.56□□□□□ -0.24
VSX1-207ENST00000557285 ZNF555Q8NEP9 628 aa13.56□□□□□ -0.24
VSX1-207ENST00000557285 OR51A4Q8NGJ6 313 aa13.56□□□□□ -0.24
VSX1-207ENST00000557285 RHOXF1Q8NHV9 184 aa13.56□□□□□ -0.24
VSX1-207ENST00000557285 TBC1D15Q8TC07 691 aa13.56□□□□□ -0.24
VSX1-207ENST00000557285 PP6455Q8WZ26 134 aa13.56□□□□□ -0.24
VSX1-207ENST00000557285 MRPL48Q96GC5 212 aaKnown RBP13.56□□□□□ -0.24
VSX1-207ENST00000557285 Q96MT0 163 aa13.56□□□□□ -0.24
VSX1-207ENST00000557285 METTL8Q9H825 291 aaKnown RBP13.56□□□□□ -0.24
VSX1-207ENST00000557285 HES4Q9HCC6 221 aa13.56□□□□□ -0.24
VSX1-207ENST00000557285 MTCH1Q9NZJ7 389 aa13.56□□□□□ -0.24
VSX1-207ENST00000557285 TRBV23-1A0A0A0MS06 115 aa13.55□□□□□ -0.24
VSX1-207ENST00000557285 MPZL2O60487 215 aa13.55□□□□□ -0.24
VSX1-207ENST00000557285 FADS2O95864 444 aaKnown RBP13.55□□□□□ -0.24
VSX1-207ENST00000557285 PAHP00439 452 aa13.55□□□□□ -0.24
VSX1-207ENST00000557285 KNG1P01042 644 aa13.55□□□□□ -0.24
VSX1-207ENST00000557285 ATF1P18846 271 aa13.55□□□□□ -0.24
VSX1-207ENST00000557285 SAA4P35542 130 aa13.55□□□□□ -0.24
VSX1-207ENST00000557285 MTCP1P56278 107 aa13.55□□□□□ -0.24
VSX1-207ENST00000557285 GALEQ14376 348 aa13.55□□□□□ -0.24
VSX1-207ENST00000557285 SMN1Q16637 294 aaKnown RBP13.55□□□□□ -0.24
VSX1-207ENST00000557285 ZSCAN26Q16670 478 aa13.55□□□□□ -0.24
VSX1-207ENST00000557285 NCR3LG1Q68D85 454 aa13.55□□□□□ -0.24
VSX1-207ENST00000557285 METAP1DQ6UB28 335 aaPredicted RBP13.55□□□□□ -0.24
VSX1-207ENST00000557285 EGFL6Q8IUX8 553 aa13.55□□□□□ -0.24
VSX1-207ENST00000557285 MKXQ8IYA7 352 aa13.55□□□□□ -0.24
VSX1-207ENST00000557285 EMG1Q92979 244 aaKnown RBP13.55□□□□□ -0.24
VSX1-207ENST00000557285 SPACA5Q96QH8 159 aa13.55□□□□□ -0.24
VSX1-207ENST00000557285 SMPD3Q9NY59 655 aaPredicted RBP13.55□□□□□ -0.24
VSX1-207ENST00000557285 IL36RNQ9UBH0 155 aa13.55□□□□□ -0.24
VSX1-207ENST00000557285 IGKV1-9A0A0C4DH69 117 aa13.54□□□□□ -0.24
VSX1-207ENST00000557285 SPRY1O43609 319 aaPredicted RBP13.54□□□□□ -0.24
VSX1-207ENST00000557285 CLIC3O95833 236 aa13.54□□□□□ -0.24
VSX1-207ENST00000557285 TK1P04183 234 aa13.54□□□□□ -0.24
VSX1-207ENST00000557285 FBP1P09467 338 aa13.54□□□□□ -0.24
VSX1-207ENST00000557285 CCL3L1P16619 93 aa13.54□□□□□ -0.24
VSX1-207ENST00000557285 COX7A1P24310 79 aa13.54□□□□□ -0.24
VSX1-207ENST00000557285 AZGP1P25311 298 aaKnown RBP13.54□□□□□ -0.24
VSX1-207ENST00000557285 DUSP1P28562 367 aa13.54□□□□□ -0.24
VSX1-207ENST00000557285 IER3P46695 156 aa13.54□□□□□ -0.24
VSX1-207ENST00000557285 RBP2P50120 134 aa13.54□□□□□ -0.24
VSX1-207ENST00000557285 ATP1B3P54709 279 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms